Wall clock time and date at job start Sun Mar 7 2021 22:00:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86304 * 109.47317 * 2 1 4 4 C 1.50702 * 109.47513 * 120.00321 * 2 1 3 5 5 C 1.38321 * 119.92223 * 245.00291 * 4 2 1 6 6 C 1.38460 * 120.28553 * 179.97438 * 5 4 2 7 7 Br 1.89103 * 119.94109 * 179.97438 * 6 5 4 8 8 C 1.38036 * 120.12544 * 359.97438 * 6 5 4 9 9 C 1.39586 * 119.83801 * 0.02562 * 8 6 5 10 10 C 1.47848 * 120.13903 * 179.97438 * 9 8 6 11 11 O 1.21551 * 120.00058 * 179.97438 * 10 9 8 12 12 N 1.34772 * 119.99927 * 0.02562 * 10 9 8 13 13 C 1.46501 * 120.00042 * 179.97438 * 12 10 9 14 14 H 1.09000 * 112.90742 * 23.74973 * 13 12 10 15 15 C 1.53787 * 113.61128 * 154.99929 * 13 12 10 16 16 C 1.53784 * 87.07923 * 139.98386 * 15 13 12 17 17 H 1.09002 * 113.61478 * 89.11632 * 16 15 13 18 18 O 1.42894 * 113.61434 * 220.01675 * 16 15 13 19 19 C 1.53779 * 87.08045 * 334.56667 * 16 15 13 20 20 C 1.37984 * 119.91943 * 65.25200 * 4 2 1 21 21 H 0.96699 * 113.99605 * 300.00024 * 1 2 3 22 22 H 1.09000 * 109.47410 * 240.00015 * 2 1 3 23 23 H 1.48497 * 109.99798 * 300.00093 * 3 2 1 24 24 H 1.48499 * 109.99560 * 61.31899 * 3 2 1 25 25 H 1.07997 * 119.85598 * 0.02562 * 5 4 2 26 26 H 1.07996 * 120.08179 * 180.02562 * 8 6 5 27 27 H 0.97005 * 119.99829 * 359.97438 * 12 10 9 28 28 H 1.09004 * 113.61202 * 254.53139 * 15 13 12 29 29 H 1.08994 * 113.61447 * 25.43570 * 15 13 12 30 30 H 0.96701 * 114.00237 * 180.02562 * 18 16 15 31 31 H 1.09006 * 113.61307 * 270.88660 * 19 16 15 32 32 H 1.08999 * 113.69146 * 139.99146 * 19 16 15 33 33 H 1.08000 * 120.06980 * 0.02562 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9315 -0.7105 1.2304 5 6 2.6391 -0.0104 2.1908 6 6 3.1038 -0.6555 3.3244 7 35 4.0708 0.3110 4.6308 8 6 2.8624 -2.0028 3.5027 9 6 2.1489 -2.7144 2.5369 10 6 1.8871 -4.1578 2.7208 11 8 1.2651 -4.7749 1.8784 12 7 2.3373 -4.7892 3.8231 13 6 2.0775 -6.2194 4.0057 14 1 1.8992 -6.7416 3.0657 15 6 3.1005 -6.9201 4.9153 16 6 1.9175 -7.7009 5.5119 17 1 1.6955 -8.6281 4.9837 18 8 2.0016 -7.8738 6.9279 19 6 1.0268 -6.5215 5.0872 20 6 1.6889 -2.0590 1.3938 21 1 -0.3932 0.4417 0.7651 22 1 1.7924 -0.5138 -0.8900 23 1 1.5616 2.4679 -1.2085 24 1 1.5879 2.4585 1.2243 25 1 2.8293 1.0442 2.0562 26 1 3.2248 -2.5052 4.3874 27 1 2.8334 -4.2966 4.4956 28 1 3.8089 -7.5471 4.3738 29 1 3.5841 -6.2499 5.6259 30 1 1.2606 -8.3645 7.3089 31 1 0.9435 -5.7422 5.8449 32 1 0.0605 -6.8252 4.6844 33 1 1.1401 -2.6052 0.6409 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_12335870.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:11 Heat of formation + Delta-G solvation = -55.197707 kcal Electronic energy + Delta-G solvation = -19551.355014 eV Core-core repulsion = 16204.881693 eV Total energy + Delta-G solvation = -3346.473321 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.014 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.74787 -40.58868 -39.44852 -37.82951 -36.43479 -34.42033 -33.64795 -32.69804 -30.48158 -27.09947 -26.80896 -26.36835 -24.11898 -22.85808 -21.63806 -20.92838 -19.16209 -18.82802 -17.92095 -17.67408 -17.27572 -16.56347 -16.42013 -16.33196 -16.06438 -15.69544 -15.21881 -14.99061 -14.72190 -14.28849 -14.15084 -13.70578 -13.53064 -13.32535 -13.05968 -12.75823 -12.35614 -12.27611 -11.97977 -11.83882 -11.76825 -11.46850 -11.24008 -10.84362 -10.70102 -10.41623 -10.13553 -9.93027 -4.97570 -0.54528 -0.18345 0.41535 1.20127 1.47445 1.54188 1.87632 1.95102 2.42464 3.23424 3.25477 3.32343 3.40685 3.48062 3.62226 3.77173 3.79434 3.84945 3.92970 3.95152 4.18053 4.26947 4.46486 4.54176 4.68283 4.71907 4.74415 4.89958 4.91092 4.92773 5.01876 5.08299 5.33883 5.42334 6.31116 6.41544 6.84766 6.97629 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.084 4.084 3 Si 0.763 3.237 4 C -0.113 4.113 5 C -0.062 4.062 6 C -0.099 4.099 7 Br -0.029 7.029 8 C -0.044 4.044 9 C -0.137 4.137 10 C 0.561 3.439 11 O -0.571 6.571 12 N -0.700 5.700 13 C 0.119 3.881 14 H 0.109 0.891 15 C -0.132 4.132 16 C 0.081 3.919 17 H 0.101 0.899 18 O -0.576 6.576 19 C -0.180 4.180 20 C -0.028 4.028 21 H 0.388 0.612 22 H 0.131 0.869 23 H -0.297 1.297 24 H -0.272 1.272 25 H 0.156 0.844 26 H 0.160 0.840 27 H 0.414 0.586 28 H 0.091 0.909 29 H 0.100 0.900 30 H 0.397 0.603 31 H 0.092 0.908 32 H 0.072 0.928 33 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.231 0.367 2.975 4.407 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.192 4.192 3 Si 0.667 3.333 4 C -0.114 4.114 5 C -0.081 4.081 6 C -0.179 4.179 7 Br 0.057 6.943 8 C -0.065 4.065 9 C -0.141 4.141 10 C 0.349 3.651 11 O -0.452 6.452 12 N -0.351 5.351 13 C 0.014 3.986 14 H 0.127 0.873 15 C -0.170 4.170 16 C 0.022 3.978 17 H 0.119 0.881 18 O -0.384 6.384 19 C -0.219 4.219 20 C -0.047 4.047 21 H 0.237 0.763 22 H 0.149 0.851 23 H -0.225 1.225 24 H -0.198 1.198 25 H 0.173 0.827 26 H 0.178 0.822 27 H 0.253 0.747 28 H 0.110 0.890 29 H 0.118 0.882 30 H 0.247 0.753 31 H 0.110 0.890 32 H 0.091 0.909 33 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 3.596 1.117 2.278 4.401 hybrid contribution -1.828 -0.534 0.465 1.960 sum 1.769 0.583 2.743 3.315 Atomic orbital electron populations 1.86619 1.18135 1.80373 1.50216 1.25302 0.83720 1.12125 0.98060 0.94126 0.90211 0.71687 0.77317 1.20257 0.99836 0.93854 0.97452 1.21425 0.94434 1.00871 0.91377 1.21731 1.04147 0.95213 0.96771 1.96863 1.72237 1.73508 1.51712 1.21453 0.94329 0.92279 0.98391 1.19869 1.03770 0.93124 0.97316 1.18381 0.78301 0.86887 0.81515 1.90794 1.41991 1.68080 1.44303 1.45770 1.56726 1.10380 1.22238 1.22288 0.97267 0.80534 0.98493 0.87302 1.23452 0.96811 0.99097 0.97593 1.23126 0.96310 0.96600 0.81805 0.88144 1.86468 1.51466 1.79630 1.20861 1.24173 0.98940 1.00054 0.98707 1.21283 0.94010 0.93757 0.95658 0.76270 0.85135 1.22457 1.19840 0.82673 0.82245 0.74736 0.88999 0.88198 0.75315 0.88992 0.90893 0.84944 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.02 12.84 -148.98 -1.91 -2.93 16 2 C -0.08 0.15 2.80 71.24 0.20 0.35 16 3 Si 0.76 -2.79 29.88 68.60 2.05 -0.74 16 4 C -0.11 0.14 5.34 -19.90 -0.11 0.03 16 5 C -0.06 0.18 8.41 22.34 0.19 0.37 16 6 C -0.10 0.24 6.22 22.27 0.14 0.38 16 7 Br -0.03 0.07 33.69 -20.37 -0.69 -0.61 16 8 C -0.04 0.13 9.28 22.55 0.21 0.34 16 9 C -0.14 -0.19 5.87 -20.09 -0.12 -0.30 16 10 C 0.56 2.61 7.77 86.79 0.67 3.29 16 11 O -0.57 -7.38 15.95 -3.88 -0.06 -7.44 16 12 N -0.70 0.89 5.31 -442.90 -2.35 -1.46 16 13 C 0.12 -0.13 4.24 45.52 0.19 0.06 16 14 H 0.11 0.21 7.47 -2.39 -0.02 0.19 16 15 C -0.13 0.49 7.66 31.12 0.24 0.73 16 16 C 0.08 -0.27 5.21 31.12 0.16 -0.10 16 17 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 18 O -0.58 0.68 13.67 -148.98 -2.04 -1.36 16 19 C -0.18 0.36 7.71 31.12 0.24 0.60 16 20 C -0.03 -0.07 9.23 22.53 0.21 0.14 16 21 H 0.39 -1.59 8.70 -74.06 -0.64 -2.23 16 22 H 0.13 -0.42 7.96 -2.39 -0.02 -0.44 16 23 H -0.30 -1.25 7.11 99.48 0.71 -0.54 16 24 H -0.27 0.23 7.00 99.48 0.70 0.93 16 25 H 0.16 -0.91 4.82 -2.91 -0.01 -0.93 16 26 H 0.16 -1.28 6.41 -2.91 -0.02 -1.30 16 27 H 0.41 -2.77 6.76 -92.70 -0.63 -3.40 16 28 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 29 H 0.10 -0.42 8.12 -2.39 -0.02 -0.44 16 30 H 0.40 -3.45 9.12 -74.06 -0.68 -4.12 16 31 H 0.09 -0.14 8.14 -2.38 -0.02 -0.15 16 32 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 33 H 0.13 0.71 7.65 -2.91 -0.02 0.69 16 Total: 0.00 -18.08 304.75 -3.50 -21.58 By element: Atomic # 1 Polarization: -12.19 SS G_CDS: -0.73 Total: -12.92 kcal Atomic # 6 Polarization: 3.65 SS G_CDS: 2.23 Total: 5.87 kcal Atomic # 7 Polarization: 0.89 SS G_CDS: -2.35 Total: -1.46 kcal Atomic # 8 Polarization: -7.72 SS G_CDS: -4.01 Total: -11.73 kcal Atomic # 14 Polarization: -2.79 SS G_CDS: 2.05 Total: -0.74 kcal Atomic # 35 Polarization: 0.07 SS G_CDS: -0.69 Total: -0.61 kcal Total: -18.08 -3.50 -21.58 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12335870.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.613 kcal (2) G-P(sol) polarization free energy of solvation -18.083 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.696 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.502 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.585 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.198 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds