Wall clock time and date at job start Sun Mar 7 2021 22:00:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.47063 * 2 1 4 4 C 1.50700 * 109.47103 * 240.00331 * 2 1 3 5 5 C 1.38405 * 119.82351 * 299.99738 * 4 2 1 6 6 C 1.37890 * 120.16807 * 180.02562 * 5 4 2 7 7 C 1.39839 * 119.82773 * 359.97411 * 6 5 4 8 8 C 1.47206 * 120.17211 * 179.97438 * 7 6 5 9 9 C 1.34811 * 120.00456 * 179.97438 * 8 7 6 10 10 C 1.46426 * 120.00131 * 179.97438 * 9 8 7 11 11 O 1.21697 * 120.00130 * 0.02562 * 10 9 8 12 12 N 1.34776 * 119.99548 * 179.97438 * 10 9 8 13 13 C 1.46506 * 119.99649 * 179.97438 * 12 10 9 14 14 H 1.09007 * 112.84595 * 23.81259 * 13 12 10 15 15 C 1.53779 * 113.61276 * 155.00300 * 13 12 10 16 16 C 1.53787 * 87.07963 * 89.20243 * 15 13 12 17 17 H 1.09004 * 113.61202 * 139.98084 * 16 15 13 18 18 O 1.42896 * 113.61435 * 270.88419 * 16 15 13 19 19 C 1.53779 * 113.69339 * 252.54233 * 13 12 10 20 20 C 1.39832 * 119.66050 * 0.25691 * 7 6 5 21 21 C 1.37900 * 119.82351 * 359.53607 * 20 7 6 22 22 H 0.96700 * 114.00090 * 300.00279 * 1 2 3 23 23 H 1.08998 * 109.47428 * 119.99651 * 2 1 3 24 24 H 1.48504 * 110.00066 * 178.68169 * 3 2 1 25 25 H 1.48503 * 110.00301 * 300.00152 * 3 2 1 26 26 H 1.07992 * 119.91627 * 0.02562 * 5 4 2 27 27 H 1.07998 * 120.08677 * 180.02562 * 6 5 4 28 28 H 1.08006 * 119.99788 * 0.02562 * 8 7 6 29 29 H 1.07998 * 119.99520 * 0.02562 * 9 8 7 30 30 H 0.96998 * 120.00727 * 0.02562 * 12 10 9 31 31 H 1.08997 * 113.61646 * 334.65874 * 15 13 12 32 32 H 1.09000 * 113.61527 * 203.75146 * 15 13 12 33 33 H 0.96699 * 113.99840 * 179.97438 * 18 16 15 34 34 H 1.09002 * 113.61557 * 156.32618 * 19 13 12 35 35 H 1.09004 * 113.61501 * 25.42039 * 19 13 12 36 36 H 1.08005 * 120.08826 * 179.72270 * 20 7 6 37 37 H 1.07997 * 119.91189 * 180.21142 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 1.5948 -2.0354 -1.4459 6 6 2.0510 -2.6924 -2.5692 7 6 2.8551 -2.0163 -3.4920 8 6 3.3467 -2.7105 -4.6934 9 6 4.1213 -2.0552 -5.5811 10 6 4.6107 -2.7459 -6.7759 11 8 4.3179 -3.9114 -6.9677 12 7 5.3846 -2.0905 -7.6635 13 6 5.8748 -2.7818 -8.8586 14 1 5.2532 -3.6317 -9.1408 15 6 6.1946 -1.8370 -10.0290 16 6 7.6144 -1.7260 -9.4485 17 1 8.3972 -1.7234 -10.2070 18 8 7.7616 -0.6731 -8.4936 19 6 7.3773 -3.1059 -8.8124 20 6 3.1947 -0.6790 -3.2648 21 6 2.7272 -0.0344 -2.1389 22 1 -0.3933 0.4417 0.7650 23 1 1.7924 -0.5138 0.8900 24 1 3.5346 1.7703 0.0321 25 1 1.5615 2.4680 -1.2085 26 1 0.9734 -2.5561 -0.7326 27 1 1.7872 -3.7263 -2.7362 28 1 3.0861 -3.7446 -4.8641 29 1 4.3814 -1.0210 -5.4106 30 1 5.6177 -1.1615 -7.5108 31 1 5.6366 -0.9012 -9.9998 32 1 6.1584 -2.3223 -11.0044 33 1 8.6523 -0.5986 -8.1246 34 1 7.6645 -3.9381 -9.4552 35 1 7.7740 -3.1944 -7.8010 36 1 3.8191 -0.1514 -3.9707 37 1 2.9858 0.9994 -1.9637 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12360594.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:19 Heat of formation + Delta-G solvation = -40.169353 kcal Electronic energy + Delta-G solvation = -20165.544724 eV Core-core repulsion = 16875.777325 eV Total energy + Delta-G solvation = -3289.767399 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 276.119 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -41.30463 -40.63246 -39.53587 -37.76460 -36.12515 -35.10929 -33.77311 -32.28742 -31.29738 -27.39943 -26.85362 -25.59513 -24.12615 -23.61351 -22.01611 -20.66116 -20.37501 -18.84945 -18.44704 -18.22678 -17.38042 -17.06668 -16.66156 -16.28212 -16.18917 -15.66945 -15.44702 -15.20533 -15.14083 -14.74981 -14.35193 -14.00291 -13.80754 -13.73237 -13.59453 -13.53882 -12.95082 -12.73051 -12.39590 -12.31250 -12.01623 -11.92544 -11.54197 -11.31740 -10.89199 -10.78100 -10.37814 -10.04619 -9.97733 -9.24999 -5.02243 -0.55205 0.32165 0.90925 1.22603 1.58884 1.91755 2.18969 2.31550 2.75841 2.94535 3.30043 3.41620 3.53813 3.64404 3.72391 3.77044 3.79210 3.86053 4.03514 4.14353 4.18505 4.24142 4.31043 4.47700 4.58036 4.62401 4.74615 4.75848 4.84052 4.90453 4.91589 4.95245 5.05254 5.12358 5.35312 5.42411 5.57144 5.63945 5.82483 6.49836 6.55642 6.65703 7.33255 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.075 4.075 3 Si 0.684 3.316 4 C -0.063 4.063 5 C -0.091 4.091 6 C -0.091 4.091 7 C -0.073 4.073 8 C -0.016 4.016 9 C -0.213 4.213 10 C 0.549 3.451 11 O -0.546 6.546 12 N -0.702 5.702 13 C 0.125 3.875 14 H 0.104 0.896 15 C -0.142 4.142 16 C 0.077 3.923 17 H 0.072 0.928 18 O -0.554 6.554 19 C -0.185 4.185 20 C -0.094 4.094 21 C -0.126 4.126 22 H 0.383 0.617 23 H 0.077 0.923 24 H -0.255 1.255 25 H -0.250 1.250 26 H 0.133 0.867 27 H 0.134 0.866 28 H 0.139 0.861 29 H 0.129 0.871 30 H 0.408 0.592 31 H 0.083 0.917 32 H 0.110 0.890 33 H 0.385 0.615 34 H 0.099 0.901 35 H 0.077 0.923 36 H 0.132 0.868 37 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.035 3.336 2.566 4.675 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.185 4.185 3 Si 0.585 3.415 4 C -0.064 4.064 5 C -0.109 4.109 6 C -0.109 4.109 7 C -0.073 4.073 8 C -0.035 4.035 9 C -0.233 4.233 10 C 0.338 3.662 11 O -0.425 6.425 12 N -0.353 5.353 13 C 0.019 3.981 14 H 0.122 0.878 15 C -0.180 4.180 16 C 0.018 3.982 17 H 0.090 0.910 18 O -0.360 6.360 19 C -0.224 4.224 20 C -0.112 4.112 21 C -0.144 4.144 22 H 0.231 0.769 23 H 0.095 0.905 24 H -0.180 1.180 25 H -0.175 1.175 26 H 0.151 0.849 27 H 0.152 0.848 28 H 0.157 0.843 29 H 0.147 0.853 30 H 0.245 0.755 31 H 0.102 0.898 32 H 0.128 0.872 33 H 0.233 0.767 34 H 0.118 0.882 35 H 0.096 0.904 36 H 0.149 0.851 37 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 1.781 2.892 1.290 3.633 hybrid contribution 0.888 -0.136 0.006 0.899 sum 2.669 2.756 1.296 4.050 Atomic orbital electron populations 1.86491 1.17037 1.81843 1.49761 1.24725 0.85873 1.10471 0.97451 0.95285 0.80643 0.78036 0.87553 1.19535 0.97279 0.94493 0.95046 1.20974 0.98630 0.93715 0.97598 1.21474 0.95929 1.00152 0.93304 1.19053 0.99280 0.93809 0.95145 1.22393 0.91295 0.99637 0.90215 1.22891 1.03402 1.01095 0.95931 1.18339 0.78054 0.86443 0.83320 1.90823 1.58338 1.16644 1.76696 1.45555 1.51406 1.15877 1.22496 1.21742 0.95044 0.96111 0.85239 0.87800 1.23459 0.95348 1.00836 0.98383 1.22799 0.97875 0.86693 0.90879 0.91015 1.86356 1.36582 1.52997 1.60105 1.24144 0.97233 0.98370 1.02699 1.21311 0.99026 0.93920 0.96927 1.20803 0.99592 0.99044 0.94916 0.76881 0.90536 1.17955 1.17467 0.84944 0.84800 0.84317 0.85281 0.75533 0.89837 0.87194 0.76684 0.88224 0.90444 0.85058 0.86165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.03 12.74 -35.23 -0.45 -0.47 16 2 C -0.07 0.01 2.81 36.01 0.10 0.12 16 3 Si 0.68 -0.82 29.77 -169.99 -5.06 -5.88 16 4 C -0.06 -0.14 5.43 -104.50 -0.57 -0.71 16 5 C -0.09 -0.17 9.59 -39.65 -0.38 -0.55 16 6 C -0.09 -0.14 9.80 -39.11 -0.38 -0.52 16 7 C -0.07 -0.14 5.87 -105.06 -0.62 -0.76 16 8 C -0.02 -0.03 9.46 -37.16 -0.35 -0.38 16 9 C -0.21 -0.34 9.41 -37.50 -0.35 -0.69 16 10 C 0.55 2.02 7.74 -12.97 -0.10 1.92 16 11 O -0.55 -4.00 15.83 5.19 0.08 -3.92 16 12 N -0.70 -1.05 5.15 -54.40 -0.28 -1.33 16 13 C 0.12 0.12 4.32 -67.12 -0.29 -0.17 16 14 H 0.10 0.25 7.46 -51.93 -0.39 -0.14 16 15 C -0.14 0.14 7.66 -25.92 -0.20 -0.06 16 16 C 0.08 -0.10 5.28 -25.91 -0.14 -0.24 16 17 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 18 O -0.55 0.60 12.32 -35.23 -0.43 0.17 16 19 C -0.19 0.08 7.71 -25.92 -0.20 -0.12 16 20 C -0.09 -0.15 9.41 -39.11 -0.37 -0.52 16 21 C -0.13 -0.28 8.65 -39.65 -0.34 -0.62 16 22 H 0.38 -1.92 8.74 45.56 0.40 -1.53 16 23 H 0.08 -0.14 7.96 -51.93 -0.41 -0.56 16 24 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 25 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 26 H 0.13 0.07 8.06 -52.49 -0.42 -0.35 16 27 H 0.13 -0.05 8.06 -52.49 -0.42 -0.48 16 28 H 0.14 0.31 7.52 -52.48 -0.39 -0.09 16 29 H 0.13 -0.10 6.07 -52.49 -0.32 -0.42 16 30 H 0.41 0.03 7.58 -40.82 -0.31 -0.27 16 31 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 33 H 0.38 -1.74 9.12 45.56 0.42 -1.32 16 34 H 0.10 -0.14 8.14 -51.93 -0.42 -0.57 16 35 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 36 H 0.13 -0.07 6.17 -52.48 -0.32 -0.39 16 37 H 0.12 0.18 4.85 -52.49 -0.25 -0.08 16 LS Contribution 315.46 15.07 4.75 4.75 Total: 0.00 -8.96 315.46 -9.32 -18.28 By element: Atomic # 1 Polarization: -4.55 SS G_CDS: -3.75 Total: -8.30 kcal Atomic # 6 Polarization: 0.89 SS G_CDS: -4.19 Total: -3.29 kcal Atomic # 7 Polarization: -1.05 SS G_CDS: -0.28 Total: -1.33 kcal Atomic # 8 Polarization: -3.42 SS G_CDS: -0.80 Total: -4.22 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.06 Total: -5.88 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -8.96 -9.32 -18.28 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12360594.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.893 kcal (2) G-P(sol) polarization free energy of solvation -8.956 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.849 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.320 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.276 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.169 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds