Wall clock time and date at job start Sun Mar 7 2021 22:00:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.47063 * 2 1 4 4 C 1.50700 * 109.47103 * 240.00331 * 2 1 3 5 5 C 1.38405 * 119.82351 * 299.99738 * 4 2 1 6 6 C 1.37890 * 120.16807 * 180.02562 * 5 4 2 7 7 C 1.39839 * 119.82773 * 359.97411 * 6 5 4 8 8 C 1.47206 * 120.17211 * 179.97438 * 7 6 5 9 9 C 1.34811 * 120.00456 * 179.97438 * 8 7 6 10 10 C 1.46426 * 120.00131 * 179.97438 * 9 8 7 11 11 O 1.21697 * 120.00130 * 0.02562 * 10 9 8 12 12 N 1.34776 * 119.99548 * 179.97438 * 10 9 8 13 13 C 1.46506 * 119.99649 * 179.97438 * 12 10 9 14 14 H 1.09007 * 112.84595 * 23.81259 * 13 12 10 15 15 C 1.53779 * 113.61276 * 155.00300 * 13 12 10 16 16 C 1.53787 * 87.07963 * 89.20243 * 15 13 12 17 17 H 1.09004 * 113.61202 * 139.98084 * 16 15 13 18 18 O 1.42896 * 113.61435 * 270.88419 * 16 15 13 19 19 C 1.53779 * 113.69339 * 252.54233 * 13 12 10 20 20 C 1.39832 * 119.66050 * 0.25691 * 7 6 5 21 21 C 1.37900 * 119.82351 * 359.53607 * 20 7 6 22 22 H 0.96700 * 114.00090 * 300.00279 * 1 2 3 23 23 H 1.08998 * 109.47428 * 119.99651 * 2 1 3 24 24 H 1.48504 * 110.00066 * 178.68169 * 3 2 1 25 25 H 1.48503 * 110.00301 * 300.00152 * 3 2 1 26 26 H 1.07992 * 119.91627 * 0.02562 * 5 4 2 27 27 H 1.07998 * 120.08677 * 180.02562 * 6 5 4 28 28 H 1.08006 * 119.99788 * 0.02562 * 8 7 6 29 29 H 1.07998 * 119.99520 * 0.02562 * 9 8 7 30 30 H 0.96998 * 120.00727 * 0.02562 * 12 10 9 31 31 H 1.08997 * 113.61646 * 334.65874 * 15 13 12 32 32 H 1.09000 * 113.61527 * 203.75146 * 15 13 12 33 33 H 0.96699 * 113.99840 * 179.97438 * 18 16 15 34 34 H 1.09002 * 113.61557 * 156.32618 * 19 13 12 35 35 H 1.09004 * 113.61501 * 25.42039 * 19 13 12 36 36 H 1.08005 * 120.08826 * 179.72270 * 20 7 6 37 37 H 1.07997 * 119.91189 * 180.21142 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 1.5948 -2.0354 -1.4459 6 6 2.0510 -2.6924 -2.5692 7 6 2.8551 -2.0163 -3.4920 8 6 3.3467 -2.7105 -4.6934 9 6 4.1213 -2.0552 -5.5811 10 6 4.6107 -2.7459 -6.7759 11 8 4.3179 -3.9114 -6.9677 12 7 5.3846 -2.0905 -7.6635 13 6 5.8748 -2.7818 -8.8586 14 1 5.2532 -3.6317 -9.1408 15 6 6.1946 -1.8370 -10.0290 16 6 7.6144 -1.7260 -9.4485 17 1 8.3972 -1.7234 -10.2070 18 8 7.7616 -0.6731 -8.4936 19 6 7.3773 -3.1059 -8.8124 20 6 3.1947 -0.6790 -3.2648 21 6 2.7272 -0.0344 -2.1389 22 1 -0.3933 0.4417 0.7650 23 1 1.7924 -0.5138 0.8900 24 1 3.5346 1.7703 0.0321 25 1 1.5615 2.4680 -1.2085 26 1 0.9734 -2.5561 -0.7326 27 1 1.7872 -3.7263 -2.7362 28 1 3.0861 -3.7446 -4.8641 29 1 4.3814 -1.0210 -5.4106 30 1 5.6177 -1.1615 -7.5108 31 1 5.6366 -0.9012 -9.9998 32 1 6.1584 -2.3223 -11.0044 33 1 8.6523 -0.5986 -8.1246 34 1 7.6645 -3.9381 -9.4552 35 1 7.7740 -3.1944 -7.8010 36 1 3.8191 -0.1514 -3.9707 37 1 2.9858 0.9994 -1.9637 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_12360594.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:18 Heat of formation + Delta-G solvation = -42.523425 kcal Electronic energy + Delta-G solvation = -20165.646804 eV Core-core repulsion = 16875.777325 eV Total energy + Delta-G solvation = -3289.869479 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 276.119 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.42260 -40.69834 -39.67181 -37.73643 -36.09739 -35.24609 -33.91652 -32.37650 -31.38522 -27.46845 -26.80102 -25.61288 -24.21016 -23.69275 -22.12552 -20.79227 -20.41080 -18.95316 -18.38222 -18.17832 -17.44671 -17.21434 -16.70393 -16.32599 -16.25311 -15.89167 -15.48606 -15.23336 -15.19597 -14.81844 -14.42548 -14.09010 -13.86812 -13.72392 -13.62487 -13.53726 -13.06958 -12.71458 -12.41804 -12.35354 -12.09832 -11.95916 -11.49974 -11.45559 -11.18063 -10.72060 -10.32973 -10.16196 -10.13339 -9.35775 -4.94913 -0.68675 0.21354 0.75400 1.28954 1.63254 1.95471 2.06617 2.10629 2.65363 3.09005 3.33838 3.43721 3.46229 3.59563 3.71503 3.73459 3.82213 3.87012 4.03816 4.07535 4.13215 4.19298 4.29979 4.46547 4.66133 4.68718 4.69130 4.78085 4.82873 4.84453 4.92830 4.94659 4.98768 5.03999 5.24400 5.32799 5.44928 5.53082 5.74189 6.46408 6.81870 6.88763 7.12315 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.564 6.564 2 C -0.083 4.083 3 Si 0.774 3.226 4 C -0.080 4.080 5 C -0.102 4.102 6 C -0.096 4.096 7 C -0.083 4.083 8 C -0.016 4.016 9 C -0.212 4.212 10 C 0.543 3.457 11 O -0.591 6.591 12 N -0.691 5.691 13 C 0.107 3.893 14 H 0.083 0.917 15 C -0.136 4.136 16 C 0.084 3.916 17 H 0.091 0.909 18 O -0.568 6.568 19 C -0.181 4.181 20 C -0.098 4.098 21 C -0.145 4.145 22 H 0.404 0.596 23 H 0.097 0.903 24 H -0.286 1.286 25 H -0.297 1.297 26 H 0.143 0.857 27 H 0.148 0.852 28 H 0.131 0.869 29 H 0.154 0.846 30 H 0.416 0.584 31 H 0.078 0.922 32 H 0.127 0.873 33 H 0.399 0.601 34 H 0.110 0.890 35 H 0.065 0.935 36 H 0.150 0.850 37 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.476 4.081 2.869 5.569 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.374 6.374 2 C -0.192 4.192 3 Si 0.680 3.320 4 C -0.080 4.080 5 C -0.120 4.120 6 C -0.113 4.113 7 C -0.083 4.083 8 C -0.035 4.035 9 C -0.232 4.232 10 C 0.333 3.667 11 O -0.474 6.474 12 N -0.341 5.341 13 C 0.001 3.999 14 H 0.101 0.899 15 C -0.174 4.174 16 C 0.025 3.975 17 H 0.108 0.892 18 O -0.377 6.377 19 C -0.220 4.220 20 C -0.115 4.115 21 C -0.162 4.162 22 H 0.256 0.744 23 H 0.115 0.885 24 H -0.214 1.214 25 H -0.225 1.225 26 H 0.161 0.839 27 H 0.166 0.834 28 H 0.149 0.851 29 H 0.172 0.828 30 H 0.254 0.746 31 H 0.097 0.903 32 H 0.145 0.855 33 H 0.250 0.750 34 H 0.128 0.872 35 H 0.084 0.916 36 H 0.167 0.833 37 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 2.232 3.662 1.619 4.584 hybrid contribution 0.752 -0.352 -0.111 0.838 sum 2.984 3.310 1.508 4.705 Atomic orbital electron populations 1.86438 1.17035 1.82438 1.51463 1.24874 0.86045 1.11100 0.97198 0.94341 0.77338 0.75436 0.84900 1.19946 0.97143 0.94963 0.95930 1.21173 0.98958 0.93850 0.97974 1.21732 0.95528 1.00932 0.93149 1.19110 0.99814 0.94096 0.95248 1.22368 0.91369 0.99375 0.90431 1.22972 1.03245 1.02024 0.94960 1.18705 0.77950 0.86025 0.84009 1.90795 1.60225 1.18559 1.77819 1.45530 1.50370 1.16100 1.22143 1.21933 0.95670 0.96369 0.85940 0.89862 1.23491 0.95542 1.00042 0.98297 1.22770 0.98011 0.85797 0.90946 0.89168 1.86318 1.38107 1.52917 1.60317 1.24143 0.95754 0.99710 1.02426 1.21553 0.98941 0.93918 0.97112 1.20978 1.00342 0.99353 0.95530 0.74417 0.88514 1.21367 1.22532 0.83894 0.83402 0.85129 0.82836 0.74576 0.90337 0.85501 0.74999 0.87168 0.91622 0.83274 0.86053 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.35 12.74 -148.98 -1.90 -1.55 16 2 C -0.08 0.08 2.81 71.24 0.20 0.28 16 3 Si 0.77 -1.87 29.77 68.60 2.04 0.17 16 4 C -0.08 -0.36 5.43 -19.79 -0.11 -0.47 16 5 C -0.10 -0.39 9.59 22.23 0.21 -0.18 16 6 C -0.10 -0.34 9.80 22.57 0.22 -0.12 16 7 C -0.08 -0.37 5.87 -20.15 -0.12 -0.48 16 8 C -0.02 -0.08 9.46 23.84 0.23 0.15 16 9 C -0.21 -0.81 9.41 23.62 0.22 -0.58 16 10 C 0.54 4.74 7.74 86.37 0.67 5.41 16 11 O -0.59 -10.01 15.83 -4.34 -0.07 -10.08 16 12 N -0.69 -2.62 5.15 -444.25 -2.29 -4.91 16 13 C 0.11 0.30 4.32 45.52 0.20 0.49 16 14 H 0.08 0.57 7.46 -2.38 -0.02 0.55 16 15 C -0.14 0.31 7.66 31.12 0.24 0.55 16 16 C 0.08 -0.30 5.28 31.12 0.16 -0.14 16 17 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 18 O -0.57 1.72 12.32 -148.98 -1.84 -0.11 16 19 C -0.18 0.14 7.71 31.12 0.24 0.38 16 20 C -0.10 -0.35 9.41 22.58 0.21 -0.14 16 21 C -0.14 -0.72 8.65 22.23 0.19 -0.53 16 22 H 0.40 -4.54 8.74 -74.06 -0.65 -5.19 16 23 H 0.10 -0.49 7.96 -2.39 -0.02 -0.51 16 24 H -0.29 -0.76 7.11 99.48 0.71 -0.05 16 25 H -0.30 -1.58 7.11 99.48 0.71 -0.88 16 26 H 0.14 0.13 8.06 -2.91 -0.02 0.11 16 27 H 0.15 -0.05 8.06 -2.91 -0.02 -0.07 16 28 H 0.13 0.82 7.52 -2.91 -0.02 0.80 16 29 H 0.15 -0.30 6.07 -2.91 -0.02 -0.32 16 30 H 0.42 0.13 7.58 -92.71 -0.70 -0.58 16 31 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 32 H 0.13 -0.75 8.14 -2.39 -0.02 -0.77 16 33 H 0.40 -3.99 9.12 -74.06 -0.68 -4.67 16 34 H 0.11 -0.34 8.14 -2.39 -0.02 -0.36 16 35 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 36 H 0.15 -0.19 6.17 -2.91 -0.02 -0.21 16 37 H 0.12 0.46 4.85 -2.91 -0.01 0.45 16 Total: 0.00 -22.02 315.46 -2.14 -24.16 By element: Atomic # 1 Polarization: -11.45 SS G_CDS: -0.86 Total: -12.32 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: 2.77 Total: 4.62 kcal Atomic # 7 Polarization: -2.62 SS G_CDS: -2.29 Total: -4.91 kcal Atomic # 8 Polarization: -7.93 SS G_CDS: -3.80 Total: -11.73 kcal Atomic # 14 Polarization: -1.87 SS G_CDS: 2.04 Total: 0.17 kcal Total: -22.02 -2.14 -24.16 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12360594.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.362 kcal (2) G-P(sol) polarization free energy of solvation -22.019 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.381 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.143 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.161 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.523 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds