Wall clock time and date at job start Sun Mar 7 2021 22:00:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.47234 * 2 1 4 4 C 1.50706 * 109.47049 * 119.99570 * 2 1 3 5 5 C 1.38605 * 119.84332 * 195.02168 * 4 2 1 6 6 F 1.35099 * 119.91846 * 359.97438 * 5 4 2 7 7 C 1.38110 * 120.16459 * 179.97438 * 5 4 2 8 8 C 1.39613 * 119.85445 * 0.02562 * 7 5 4 9 9 C 1.47698 * 120.15854 * 180.02562 * 8 7 5 10 10 O 1.21578 * 120.00053 * 179.97438 * 9 8 7 11 11 N 1.34777 * 119.99886 * 359.97438 * 9 8 7 12 12 C 1.46503 * 119.99807 * 180.02562 * 11 9 8 13 13 H 1.08998 * 112.85040 * 25.32889 * 12 11 9 14 14 C 1.53777 * 113.61171 * 156.52737 * 12 11 9 15 15 C 1.53785 * 87.07914 * 139.97883 * 14 12 11 16 16 H 1.08996 * 113.61714 * 89.19876 * 15 14 12 17 17 O 1.42899 * 113.61456 * 220.01747 * 15 14 12 18 18 C 1.53780 * 113.61113 * 254.13379 * 12 11 9 19 19 C 1.39846 * 119.68660 * 359.70531 * 8 7 5 20 20 F 1.35104 * 120.08342 * 180.29901 * 19 8 7 21 21 C 1.38235 * 119.84022 * 15.00347 * 4 2 1 22 22 H 0.96699 * 113.99949 * 300.00817 * 1 2 3 23 23 H 1.09000 * 109.47634 * 239.99528 * 2 1 3 24 24 H 1.48498 * 110.00086 * 178.68089 * 3 2 1 25 25 H 1.48497 * 109.99562 * 299.99546 * 3 2 1 26 26 H 1.08003 * 120.07860 * 179.97438 * 7 5 4 27 27 H 0.96997 * 119.99825 * 359.97438 * 11 9 8 28 28 H 1.09003 * 113.61555 * 254.52256 * 14 12 11 29 29 H 1.09000 * 113.61729 * 25.34607 * 14 12 11 30 30 H 0.96698 * 114.00414 * 179.97438 * 17 15 14 31 31 H 1.09002 * 113.61351 * 334.56979 * 18 12 11 32 32 H 1.08999 * 113.61437 * 105.46956 * 18 12 11 33 33 H 1.08002 * 119.92494 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 3.2560 -0.5721 1.6143 6 9 4.0922 0.1980 0.8843 7 6 3.7233 -1.2196 2.7412 8 6 2.8581 -2.0156 3.4943 9 6 3.3506 -2.7107 4.7009 10 8 2.5946 -3.4027 5.3549 11 7 4.6380 -2.5778 5.0769 12 6 5.1266 -3.2677 6.2734 13 1 4.5463 -4.1582 6.5152 14 6 6.6460 -3.5045 6.2706 15 6 6.6251 -3.1473 7.7662 16 1 6.4561 -4.0047 8.4176 17 8 7.7346 -2.3470 8.1792 18 6 5.3510 -2.3339 7.4744 19 6 1.5214 -2.1462 3.1047 20 9 0.6758 -2.9096 3.8310 21 6 1.0686 -1.4964 1.9714 22 1 -0.3933 0.4418 0.7650 23 1 1.7924 -0.5139 -0.8899 24 1 3.5346 1.7703 0.0321 25 1 1.5616 2.4678 -1.2086 26 1 4.7558 -1.1113 3.0387 27 1 5.2412 -2.0260 4.5549 28 1 6.9263 -4.5391 6.0727 29 1 7.1979 -2.7918 5.6578 30 1 7.7269 -2.1187 9.1188 31 1 5.5483 -1.2996 7.1924 32 1 4.5874 -2.4247 8.2468 33 1 0.0375 -1.5991 1.6670 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_12360598.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:22 Heat of formation + Delta-G solvation = -135.428262 kcal Electronic energy + Delta-G solvation = -22433.287880 eV Core-core repulsion = 18484.245553 eV Total energy + Delta-G solvation = -3949.042327 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 286.085 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -50.45062 -50.09777 -41.56935 -40.37197 -39.46283 -37.66525 -36.42370 -34.38599 -32.72348 -31.43587 -28.11616 -26.80436 -25.47839 -24.21476 -23.45438 -21.89636 -21.10803 -19.51008 -19.15625 -18.74916 -18.46442 -17.80521 -17.53779 -17.27280 -16.75670 -16.73803 -16.26774 -16.05723 -15.93796 -15.75893 -15.74717 -15.20954 -14.74240 -14.49690 -14.19227 -13.72686 -13.71062 -13.52025 -13.25810 -13.01206 -12.72749 -12.52476 -12.31368 -11.78517 -11.54845 -11.18784 -11.00793 -10.81440 -10.30321 -10.17172 -9.72732 -5.00390 -0.79408 -0.28795 1.13427 1.45257 1.65013 1.82743 1.98002 2.26829 2.79139 2.82971 3.11935 3.18888 3.31143 3.38403 3.51478 3.53815 3.64932 3.78433 3.81287 3.94061 4.19350 4.32249 4.39113 4.44816 4.64234 4.69265 4.72685 4.74230 4.78094 4.91430 4.93656 5.04022 5.38444 5.42180 6.28109 6.63553 6.85452 6.95584 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.071 4.071 3 Si 0.763 3.237 4 C -0.083 4.083 5 C 0.072 3.928 6 F -0.121 7.121 7 C -0.069 4.069 8 C -0.159 4.159 9 C 0.559 3.441 10 O -0.563 6.563 11 N -0.697 5.697 12 C 0.119 3.881 13 H 0.107 0.893 14 C -0.131 4.131 15 C 0.081 3.919 16 H 0.100 0.900 17 O -0.576 6.576 18 C -0.178 4.178 19 C 0.140 3.860 20 F -0.127 7.127 21 C -0.115 4.115 22 H 0.400 0.600 23 H 0.128 0.872 24 H -0.254 1.254 25 H -0.303 1.303 26 H 0.179 0.821 27 H 0.416 0.584 28 H 0.090 0.910 29 H 0.101 0.899 30 H 0.397 0.603 31 H 0.094 0.906 32 H 0.073 0.927 33 H 0.176 0.824 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.490 3.251 1.433 4.338 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.180 4.180 3 Si 0.666 3.334 4 C -0.084 4.084 5 C 0.052 3.948 6 F -0.100 7.100 7 C -0.089 4.089 8 C -0.163 4.163 9 C 0.346 3.654 10 O -0.442 6.442 11 N -0.349 5.349 12 C 0.015 3.985 13 H 0.125 0.875 14 C -0.169 4.169 15 C 0.021 3.979 16 H 0.118 0.882 17 O -0.384 6.384 18 C -0.217 4.217 19 C 0.120 3.880 20 F -0.105 7.105 21 C -0.134 4.134 22 H 0.251 0.749 23 H 0.145 0.855 24 H -0.179 1.179 25 H -0.231 1.231 26 H 0.196 0.804 27 H 0.254 0.746 28 H 0.109 0.891 29 H 0.119 0.881 30 H 0.247 0.753 31 H 0.112 0.888 32 H 0.091 0.909 33 H 0.193 0.807 Dipole moment (debyes) X Y Z Total from point charges 2.698 2.967 0.338 4.025 hybrid contribution -0.003 -0.483 0.153 0.507 sum 2.695 2.484 0.490 3.698 Atomic orbital electron populations 1.86502 1.16218 1.81820 1.50970 1.25176 0.86085 1.10614 0.96153 0.94280 0.79055 0.73903 0.86133 1.20480 0.92058 0.97643 0.98269 1.17298 0.88022 0.96474 0.92996 1.91604 1.70981 1.71702 1.75710 1.21279 1.01436 0.93812 0.92341 1.19789 0.93565 1.04176 0.98790 1.18145 0.82804 0.80513 0.83903 1.90862 1.56620 1.40957 1.55776 1.45718 1.09921 1.50473 1.28780 1.22287 0.95066 0.96530 0.84666 0.87501 1.23444 0.93668 1.03879 0.95935 1.23154 0.85180 0.93572 0.95976 0.88249 1.86466 1.46744 1.72575 1.32639 1.24194 0.98837 1.00389 0.98289 1.17946 0.86843 0.92093 0.91143 1.91596 1.69756 1.72766 1.76383 1.20890 1.03107 0.96704 0.92682 0.74865 0.85468 1.17921 1.23071 0.80405 0.74563 0.89111 0.88059 0.75294 0.88751 0.90855 0.80682 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.38 11.63 -148.98 -1.73 0.64 16 2 C -0.07 0.30 2.96 71.24 0.21 0.51 16 3 Si 0.76 -3.08 30.81 68.60 2.11 -0.97 16 4 C -0.08 0.30 5.14 -19.78 -0.10 0.20 16 5 C 0.07 -0.23 6.65 22.33 0.15 -0.08 16 6 F -0.12 0.14 12.80 44.97 0.58 0.72 16 7 C -0.07 0.32 9.52 22.57 0.21 0.54 16 8 C -0.16 -0.15 5.88 -20.06 -0.12 -0.27 16 9 C 0.56 2.62 7.77 86.74 0.67 3.29 16 10 O -0.56 -7.73 14.96 -3.96 -0.06 -7.79 16 11 N -0.70 1.38 5.31 -443.04 -2.35 -0.98 16 12 C 0.12 -0.18 4.21 45.52 0.19 0.01 16 13 H 0.11 0.20 7.50 -2.39 -0.02 0.18 16 14 C -0.13 0.55 7.66 31.12 0.24 0.79 16 15 C 0.08 -0.30 5.21 31.18 0.16 -0.14 16 16 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 17 O -0.58 0.94 13.67 -148.98 -2.04 -1.09 16 18 C -0.18 0.47 7.73 31.18 0.24 0.71 16 19 C 0.14 0.41 7.28 22.67 0.17 0.57 16 20 F -0.13 -1.18 15.55 44.97 0.70 -0.48 16 21 C -0.12 0.27 9.20 22.28 0.20 0.48 16 22 H 0.40 -5.09 8.42 -74.06 -0.62 -5.71 16 23 H 0.13 -0.44 7.96 -2.39 -0.02 -0.46 16 24 H -0.25 -0.10 5.26 99.48 0.52 0.42 16 25 H -0.30 -1.17 7.11 99.48 0.71 -0.46 16 26 H 0.18 -1.96 6.40 -2.91 -0.02 -1.97 16 27 H 0.42 -3.40 6.74 -92.71 -0.63 -4.02 16 28 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 29 H 0.10 -0.50 8.11 -2.39 -0.02 -0.52 16 30 H 0.40 -3.62 9.12 -74.06 -0.68 -4.29 16 31 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 32 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 33 H 0.18 -0.91 7.06 -2.91 -0.02 -0.93 16 Total: 0.00 -21.16 290.20 -1.43 -22.59 By element: Atomic # 1 Polarization: -18.39 SS G_CDS: -0.87 Total: -19.26 kcal Atomic # 6 Polarization: 4.37 SS G_CDS: 2.23 Total: 6.60 kcal Atomic # 7 Polarization: 1.38 SS G_CDS: -2.35 Total: -0.98 kcal Atomic # 8 Polarization: -4.41 SS G_CDS: -3.83 Total: -8.24 kcal Atomic # 9 Polarization: -1.03 SS G_CDS: 1.27 Total: 0.24 kcal Atomic # 14 Polarization: -3.08 SS G_CDS: 2.11 Total: -0.97 kcal Total: -21.16 -1.43 -22.59 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12360598.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.835 kcal (2) G-P(sol) polarization free energy of solvation -21.164 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.999 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.593 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.428 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds