Wall clock time and date at job start Sun Mar 7 2021 22:00:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35647 * 117.00083 * 2 1 4 4 C 1.40139 * 120.14870 * 179.97438 * 3 2 1 5 5 C 1.47535 * 120.19292 * 359.95818 * 4 3 2 6 6 O 1.21588 * 120.00151 * 359.97438 * 5 4 3 7 7 N 1.34784 * 119.99965 * 179.97438 * 5 4 3 8 8 C 1.46494 * 119.99635 * 179.97438 * 7 5 4 9 9 H 1.09005 * 112.85456 * 336.19315 * 8 7 5 10 10 C 1.53780 * 113.61660 * 107.50699 * 8 7 5 11 11 C 1.53774 * 87.08267 * 89.11129 * 10 8 7 12 12 H 1.09006 * 113.61579 * 139.98493 * 11 10 8 13 13 O 1.42898 * 113.61593 * 270.88303 * 11 10 8 14 14 C 1.53782 * 87.08386 * 25.43475 * 11 10 8 15 15 C 1.39707 * 119.61703 * 180.22752 * 4 3 2 16 16 C 1.37794 * 119.90864 * 359.51629 * 15 4 3 17 17 C 1.50697 * 119.85144 * 180.22662 * 16 15 4 18 18 O 1.42896 * 109.46808 * 65.24102 * 17 16 15 19 19 Si 1.86306 * 109.47063 * 185.23587 * 17 16 15 20 20 C 1.38545 * 120.29615 * 0.47051 * 16 15 4 21 21 C 1.38060 * 120.39166 * 359.78126 * 20 16 15 22 22 H 1.09006 * 109.47080 * 300.00280 * 1 2 3 23 23 H 1.08994 * 109.47554 * 60.00044 * 1 2 3 24 24 H 1.08998 * 109.47351 * 180.02562 * 1 2 3 25 25 H 0.96995 * 120.00015 * 359.72371 * 7 5 4 26 26 H 1.08997 * 113.61467 * 203.66565 * 10 8 7 27 27 H 1.09000 * 113.60965 * 334.56513 * 10 8 7 28 28 H 0.96703 * 114.00661 * 277.49741 * 13 11 10 29 29 H 1.09000 * 113.61415 * 220.01821 * 14 11 10 30 30 H 1.09000 * 113.68771 * 89.11987 * 14 11 10 31 31 H 1.08002 * 120.04884 * 179.72724 * 15 4 3 32 32 H 1.08998 * 109.47441 * 305.23666 * 17 16 15 33 33 H 0.96701 * 114.00947 * 59.99850 * 18 17 16 34 34 H 1.48501 * 109.99623 * 58.68348 * 19 17 16 35 35 H 1.48500 * 110.00152 * 180.02562 * 19 17 16 36 36 H 1.08004 * 119.80641 * 179.76307 * 20 16 15 37 37 H 1.08004 * 119.95435 * 180.02562 * 21 20 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2086 0.0000 4 6 3.4441 1.2856 0.0005 5 6 4.2549 0.0530 0.0020 6 8 3.7094 -1.0336 0.0033 7 7 5.6005 0.1316 0.0020 8 6 6.4056 -1.0923 0.0041 9 1 5.8704 -1.9504 0.4109 10 6 7.0984 -1.3762 -1.3391 11 6 8.2770 -0.5364 -0.8192 12 1 9.2532 -0.9465 -1.0781 13 8 8.1623 0.8566 -1.1163 14 6 7.8110 -0.9041 0.5995 15 6 4.0668 2.5362 0.0054 16 6 3.3038 3.6836 -0.0005 17 6 3.9769 5.0319 -0.0005 18 8 4.6998 5.2034 -1.2211 19 14 2.6885 6.3691 0.1511 20 6 1.9207 3.6033 -0.0014 21 6 1.2925 2.3739 -0.0009 22 1 -0.3633 0.5139 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3634 -1.0276 0.0005 25 1 6.0357 0.9984 -0.0030 26 1 7.3442 -2.4273 -1.4900 27 1 6.5900 -0.9322 -2.1950 28 1 8.4540 1.0942 -2.0072 29 1 7.8779 -0.0790 1.3086 30 1 8.2510 -1.8259 0.9798 31 1 5.1447 2.6036 0.0103 32 1 4.6659 5.0941 0.8418 33 1 4.1486 5.1597 -2.0144 34 1 1.9085 6.1834 1.4010 35 1 3.3394 7.7039 0.1517 36 1 1.3304 4.5077 -0.0022 37 1 0.2138 2.3195 -0.0021 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12496546.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:25 Heat of formation + Delta-G solvation = -86.585033 kcal Electronic energy + Delta-G solvation = -22375.803594 eV Core-core repulsion = 18893.567409 eV Total energy + Delta-G solvation = -3482.236186 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -41.76511 -40.84059 -39.20129 -39.09913 -37.12530 -36.00159 -33.96717 -32.28945 -31.78395 -28.58587 -26.79198 -26.17969 -26.07637 -24.52418 -22.64522 -21.41857 -20.53043 -19.47734 -18.58282 -18.23874 -17.87932 -17.18561 -16.81053 -16.61962 -16.37357 -16.10430 -15.85643 -15.71330 -15.48948 -15.21262 -14.64869 -14.54525 -14.29595 -13.77750 -13.63759 -13.59036 -13.30112 -13.14448 -12.64484 -12.40973 -12.29969 -12.14788 -12.04702 -11.81528 -11.46607 -10.80367 -10.71210 -10.38509 -10.18939 -9.85279 -9.24744 -5.09190 -0.21086 0.22973 1.24569 1.58437 1.91473 1.94006 2.20095 2.25337 2.77161 3.00755 3.40733 3.48144 3.53516 3.63422 3.70554 3.74553 3.85995 4.00147 4.09830 4.12184 4.21783 4.22724 4.38552 4.51139 4.59032 4.63673 4.64929 4.71023 4.81412 4.88309 4.92726 4.98968 5.02292 5.12151 5.27747 5.53615 5.71374 6.32434 6.54213 6.57363 6.73736 7.44747 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.192 3.808 4 C -0.174 4.174 5 C 0.562 3.438 6 O -0.519 6.519 7 N -0.706 5.706 8 C 0.127 3.873 9 H 0.104 0.896 10 C -0.186 4.186 11 C 0.077 3.923 12 H 0.071 0.929 13 O -0.554 6.554 14 C -0.143 4.143 15 C -0.018 4.018 16 C -0.169 4.169 17 C -0.062 4.062 18 O -0.539 6.539 19 Si 0.684 3.316 20 C -0.046 4.046 21 C -0.215 4.215 22 H 0.058 0.942 23 H 0.059 0.941 24 H 0.105 0.895 25 H 0.406 0.594 26 H 0.099 0.901 27 H 0.077 0.923 28 H 0.385 0.615 29 H 0.082 0.918 30 H 0.110 0.890 31 H 0.137 0.863 32 H 0.114 0.886 33 H 0.379 0.621 34 H -0.257 1.257 35 H -0.253 1.253 36 H 0.134 0.866 37 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.843 1.791 -2.393 3.105 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.178 4.178 5 C 0.349 3.651 6 O -0.395 6.395 7 N -0.360 5.360 8 C 0.021 3.979 9 H 0.122 0.878 10 C -0.225 4.225 11 C 0.018 3.982 12 H 0.089 0.911 13 O -0.360 6.360 14 C -0.181 4.181 15 C -0.037 4.037 16 C -0.170 4.170 17 C -0.173 4.173 18 O -0.345 6.345 19 Si 0.586 3.414 20 C -0.064 4.064 21 C -0.234 4.234 22 H 0.076 0.924 23 H 0.077 0.923 24 H 0.123 0.877 25 H 0.243 0.757 26 H 0.117 0.883 27 H 0.096 0.904 28 H 0.233 0.767 29 H 0.101 0.899 30 H 0.128 0.872 31 H 0.154 0.846 32 H 0.131 0.869 33 H 0.226 0.774 34 H -0.182 1.182 35 H -0.178 1.178 36 H 0.151 0.849 37 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.197 1.537 -0.878 2.137 hybrid contribution 0.564 0.123 -0.311 0.656 sum -0.632 1.660 -1.189 2.138 Atomic orbital electron populations 1.23232 0.78240 1.04732 1.01433 1.86384 1.21155 1.25206 1.86205 1.19087 0.90920 0.85055 0.90581 1.19339 0.90866 0.93913 1.13658 1.17972 0.81892 0.88655 0.76548 1.90832 1.71589 1.28579 1.48518 1.45578 1.05414 1.09516 1.75485 1.21715 0.91092 0.88575 0.96470 0.87788 1.24144 0.98140 1.01441 0.98737 1.22787 0.97039 0.81806 0.96585 0.91067 1.86359 1.88805 1.23057 1.37758 1.23464 0.95358 1.03085 0.96191 1.21024 1.00041 0.89841 0.92765 1.20126 0.93526 0.96058 1.07298 1.24966 1.03083 0.98958 0.90265 1.86512 1.37883 1.95084 1.15001 0.94877 0.81155 0.77698 0.87704 1.20967 0.93596 0.97221 0.94631 1.21224 1.00717 0.91559 1.09860 0.92362 0.92265 0.87688 0.75699 0.88276 0.90405 0.76654 0.89908 0.87221 0.84573 0.86854 0.77371 1.18205 1.17817 0.84891 0.84123 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.28 -1.13 8.57 -40.52 -0.35 -1.48 16 3 C 0.19 0.57 6.70 -38.70 -0.26 0.31 16 4 C -0.17 -0.56 5.89 -104.84 -0.62 -1.17 16 5 C 0.56 2.75 7.76 -12.47 -0.10 2.65 16 6 O -0.52 -4.36 14.76 -16.59 -0.24 -4.60 16 7 N -0.71 -1.61 5.10 -54.05 -0.28 -1.89 16 8 C 0.13 0.19 4.32 -67.12 -0.29 -0.10 16 9 H 0.10 0.29 7.46 -51.93 -0.39 -0.09 16 10 C -0.19 0.01 7.71 -25.92 -0.20 -0.19 16 11 C 0.08 -0.08 5.28 -25.92 -0.14 -0.21 16 12 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 13 O -0.55 0.35 12.31 -35.23 -0.43 -0.09 16 14 C -0.14 0.08 7.66 -25.91 -0.20 -0.12 16 15 C -0.02 -0.02 9.16 -39.20 -0.36 -0.38 16 16 C -0.17 0.02 5.34 -104.67 -0.56 -0.54 16 17 C -0.06 0.05 2.79 36.00 0.10 0.15 16 18 O -0.54 0.24 12.83 -35.23 -0.45 -0.21 16 19 Si 0.68 -1.10 29.79 -169.99 -5.06 -6.16 16 20 C -0.05 0.04 8.65 -39.53 -0.34 -0.30 16 21 C -0.21 -0.02 9.03 -39.47 -0.36 -0.38 16 22 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 23 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 24 H 0.10 -0.15 8.14 -51.93 -0.42 -0.58 16 25 H 0.41 0.42 5.62 -40.82 -0.23 0.19 16 26 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 28 H 0.39 -1.54 9.12 45.56 0.42 -1.13 16 29 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 30 H 0.11 -0.24 8.14 -51.93 -0.42 -0.67 16 31 H 0.14 -0.01 6.40 -52.49 -0.34 -0.34 16 32 H 0.11 -0.05 7.96 -51.93 -0.41 -0.46 16 33 H 0.38 -1.58 8.70 45.56 0.40 -1.19 16 34 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 35 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 36 H 0.13 -0.44 4.88 -52.48 -0.26 -0.69 16 37 H 0.14 -0.32 6.30 -52.48 -0.33 -0.65 16 LS Contribution 308.30 15.07 4.65 4.65 Total: 0.00 -9.29 308.30 -8.16 -17.45 By element: Atomic # 1 Polarization: -4.69 SS G_CDS: -3.67 Total: -8.36 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: -2.32 Total: 0.70 kcal Atomic # 7 Polarization: -1.61 SS G_CDS: -0.28 Total: -1.89 kcal Atomic # 8 Polarization: -4.90 SS G_CDS: -1.48 Total: -6.38 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.06 Total: -6.16 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -9.29 -8.16 -17.45 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12496546.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.134 kcal (2) G-P(sol) polarization free energy of solvation -9.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.420 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.165 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.451 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds