Wall clock time and date at job start Sun Mar 7 2021 22:00:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35647 * 117.00083 * 2 1 4 4 C 1.40139 * 120.14870 * 179.97438 * 3 2 1 5 5 C 1.47535 * 120.19292 * 359.95818 * 4 3 2 6 6 O 1.21588 * 120.00151 * 359.97438 * 5 4 3 7 7 N 1.34784 * 119.99965 * 179.97438 * 5 4 3 8 8 C 1.46494 * 119.99635 * 179.97438 * 7 5 4 9 9 H 1.09005 * 112.85456 * 336.19315 * 8 7 5 10 10 C 1.53780 * 113.61660 * 107.50699 * 8 7 5 11 11 C 1.53774 * 87.08267 * 89.11129 * 10 8 7 12 12 H 1.09006 * 113.61579 * 139.98493 * 11 10 8 13 13 O 1.42898 * 113.61593 * 270.88303 * 11 10 8 14 14 C 1.53782 * 87.08386 * 25.43475 * 11 10 8 15 15 C 1.39707 * 119.61703 * 180.22752 * 4 3 2 16 16 C 1.37794 * 119.90864 * 359.51629 * 15 4 3 17 17 C 1.50697 * 119.85144 * 180.22662 * 16 15 4 18 18 O 1.42896 * 109.46808 * 65.24102 * 17 16 15 19 19 Si 1.86306 * 109.47063 * 185.23587 * 17 16 15 20 20 C 1.38545 * 120.29615 * 0.47051 * 16 15 4 21 21 C 1.38060 * 120.39166 * 359.78126 * 20 16 15 22 22 H 1.09006 * 109.47080 * 300.00280 * 1 2 3 23 23 H 1.08994 * 109.47554 * 60.00044 * 1 2 3 24 24 H 1.08998 * 109.47351 * 180.02562 * 1 2 3 25 25 H 0.96995 * 120.00015 * 359.72371 * 7 5 4 26 26 H 1.08997 * 113.61467 * 203.66565 * 10 8 7 27 27 H 1.09000 * 113.60965 * 334.56513 * 10 8 7 28 28 H 0.96703 * 114.00661 * 277.49741 * 13 11 10 29 29 H 1.09000 * 113.61415 * 220.01821 * 14 11 10 30 30 H 1.09000 * 113.68771 * 89.11987 * 14 11 10 31 31 H 1.08002 * 120.04884 * 179.72724 * 15 4 3 32 32 H 1.08998 * 109.47441 * 305.23666 * 17 16 15 33 33 H 0.96701 * 114.00947 * 59.99850 * 18 17 16 34 34 H 1.48501 * 109.99623 * 58.68348 * 19 17 16 35 35 H 1.48500 * 110.00152 * 180.02562 * 19 17 16 36 36 H 1.08004 * 119.80641 * 179.76307 * 20 16 15 37 37 H 1.08004 * 119.95435 * 180.02562 * 21 20 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2086 0.0000 4 6 3.4441 1.2856 0.0005 5 6 4.2549 0.0530 0.0020 6 8 3.7094 -1.0336 0.0033 7 7 5.6005 0.1316 0.0020 8 6 6.4056 -1.0923 0.0041 9 1 5.8704 -1.9504 0.4109 10 6 7.0984 -1.3762 -1.3391 11 6 8.2770 -0.5364 -0.8192 12 1 9.2532 -0.9465 -1.0781 13 8 8.1623 0.8566 -1.1163 14 6 7.8110 -0.9041 0.5995 15 6 4.0668 2.5362 0.0054 16 6 3.3038 3.6836 -0.0005 17 6 3.9769 5.0319 -0.0005 18 8 4.6998 5.2034 -1.2211 19 14 2.6885 6.3691 0.1511 20 6 1.9207 3.6033 -0.0014 21 6 1.2925 2.3739 -0.0009 22 1 -0.3633 0.5139 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3634 -1.0276 0.0005 25 1 6.0357 0.9984 -0.0030 26 1 7.3442 -2.4273 -1.4900 27 1 6.5900 -0.9322 -2.1950 28 1 8.4540 1.0942 -2.0072 29 1 7.8779 -0.0790 1.3086 30 1 8.2510 -1.8259 0.9798 31 1 5.1447 2.6036 0.0103 32 1 4.6659 5.0941 0.8418 33 1 4.1486 5.1597 -2.0144 34 1 1.9085 6.1834 1.4010 35 1 3.3394 7.7039 0.1517 36 1 1.3304 4.5077 -0.0022 37 1 0.2138 2.3195 -0.0021 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_12496546.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:25 Heat of formation + Delta-G solvation = -90.132604 kcal Electronic energy + Delta-G solvation = -22375.957428 eV Core-core repulsion = 18893.567409 eV Total energy + Delta-G solvation = -3482.390020 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.88767 -40.89271 -39.34339 -39.18822 -37.11374 -36.03636 -34.15350 -32.34508 -31.80338 -28.54487 -26.78451 -26.17296 -26.15808 -24.57699 -22.67256 -21.56876 -20.61764 -19.53201 -18.59773 -18.23199 -17.92861 -17.24075 -16.88901 -16.74736 -16.38193 -16.11725 -15.86003 -15.78914 -15.67318 -15.19625 -14.66542 -14.54420 -14.43795 -13.77922 -13.63898 -13.55009 -13.36509 -13.13745 -12.67965 -12.42431 -12.32917 -12.14351 -12.03258 -11.80928 -11.46965 -11.05711 -10.69433 -10.38665 -10.29755 -10.02088 -9.31430 -4.98125 -0.29581 0.19063 1.33330 1.66044 1.72975 1.99885 2.04987 2.25076 2.64536 3.11011 3.46198 3.48696 3.54954 3.66282 3.74485 3.75806 3.84560 3.97056 4.13380 4.14404 4.29754 4.35833 4.37631 4.54383 4.63682 4.69267 4.70356 4.73610 4.79975 4.86456 4.90364 4.96656 5.02150 5.09370 5.25804 5.54125 5.56251 6.29004 6.50356 6.81170 6.84487 7.18088 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.314 6.314 3 C 0.172 3.828 4 C -0.199 4.199 5 C 0.555 3.445 6 O -0.566 6.566 7 N -0.696 5.696 8 C 0.108 3.892 9 H 0.083 0.917 10 C -0.181 4.181 11 C 0.085 3.915 12 H 0.092 0.908 13 O -0.568 6.568 14 C -0.136 4.136 15 C -0.018 4.018 16 C -0.168 4.168 17 C -0.068 4.068 18 O -0.554 6.554 19 Si 0.777 3.223 20 C -0.039 4.039 21 C -0.210 4.210 22 H 0.072 0.928 23 H 0.076 0.924 24 H 0.107 0.893 25 H 0.412 0.588 26 H 0.111 0.889 27 H 0.064 0.936 28 H 0.399 0.601 29 H 0.076 0.924 30 H 0.128 0.872 31 H 0.141 0.859 32 H 0.108 0.892 33 H 0.395 0.605 34 H -0.283 1.283 35 H -0.301 1.301 36 H 0.163 0.837 37 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.938 2.994 -2.790 4.198 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.226 6.226 3 C 0.123 3.877 4 C -0.203 4.203 5 C 0.343 3.657 6 O -0.446 6.446 7 N -0.349 5.349 8 C 0.003 3.997 9 H 0.101 0.899 10 C -0.220 4.220 11 C 0.026 3.974 12 H 0.110 0.890 13 O -0.377 6.377 14 C -0.174 4.174 15 C -0.037 4.037 16 C -0.168 4.168 17 C -0.178 4.178 18 O -0.362 6.362 19 Si 0.683 3.317 20 C -0.057 4.057 21 C -0.229 4.229 22 H 0.091 0.909 23 H 0.095 0.905 24 H 0.126 0.874 25 H 0.250 0.750 26 H 0.129 0.871 27 H 0.083 0.917 28 H 0.250 0.750 29 H 0.095 0.905 30 H 0.146 0.854 31 H 0.159 0.841 32 H 0.126 0.874 33 H 0.245 0.755 34 H -0.210 1.210 35 H -0.229 1.229 36 H 0.180 0.820 37 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -1.262 2.739 -1.309 3.288 hybrid contribution 0.612 -0.195 -0.184 0.669 sum -0.650 2.544 -1.493 3.021 Atomic orbital electron populations 1.23467 0.76396 1.05529 1.02974 1.86337 1.23334 1.26366 1.86537 1.19394 0.91128 0.85717 0.91419 1.19406 0.91345 0.93827 1.15713 1.18384 0.82613 0.88796 0.75858 1.90787 1.72480 1.30242 1.51131 1.45553 1.04855 1.10153 1.74312 1.21923 0.91820 0.87744 0.98246 0.89907 1.24140 0.98278 1.02407 0.97145 1.22760 0.97356 0.81579 0.95731 0.89018 1.86325 1.89036 1.23226 1.39094 1.23501 0.93627 1.03782 0.96506 1.21075 1.00417 0.89514 0.92688 1.20271 0.93992 0.95874 1.06697 1.25134 1.03439 0.98959 0.90252 1.86480 1.38927 1.95023 1.15793 0.93842 0.78744 0.73730 0.85420 1.21294 0.93448 0.97989 0.92943 1.21505 1.01885 0.90745 1.08746 0.90896 0.90499 0.87445 0.74978 0.87075 0.91703 0.75002 0.90526 0.85368 0.84121 0.87418 0.75471 1.20966 1.22882 0.82028 0.81597 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.11 16 2 O -0.31 -3.12 8.57 -68.70 -0.59 -3.71 16 3 C 0.17 1.21 6.70 22.84 0.15 1.36 16 4 C -0.20 -1.62 5.89 -20.01 -0.12 -1.74 16 5 C 0.55 6.96 7.76 86.69 0.67 7.63 16 6 O -0.57 -11.56 14.76 16.93 0.25 -11.31 16 7 N -0.70 -4.63 5.10 -443.19 -2.26 -6.90 16 8 C 0.11 0.51 4.32 45.52 0.20 0.71 16 9 H 0.08 0.72 7.46 -2.38 -0.02 0.70 16 10 C -0.18 -0.12 7.71 31.12 0.24 0.12 16 11 C 0.08 -0.20 5.28 31.12 0.16 -0.03 16 12 H 0.09 -0.54 8.14 -2.38 -0.02 -0.56 16 13 O -0.57 0.82 12.31 -148.98 -1.83 -1.01 16 14 C -0.14 0.11 7.66 31.12 0.24 0.35 16 15 C -0.02 -0.05 9.16 22.52 0.21 0.16 16 16 C -0.17 0.14 5.34 -19.90 -0.11 0.03 16 17 C -0.07 0.16 2.79 71.24 0.20 0.36 16 18 O -0.55 0.95 12.83 -148.98 -1.91 -0.96 16 19 Si 0.78 -3.43 29.79 68.60 2.04 -1.39 16 20 C -0.04 0.12 8.65 22.30 0.19 0.32 16 21 C -0.21 0.12 9.03 22.34 0.20 0.32 16 22 H 0.07 -0.30 7.66 -2.38 -0.02 -0.32 16 23 H 0.08 -0.37 7.66 -2.39 -0.02 -0.38 16 24 H 0.11 -0.21 8.14 -2.39 -0.02 -0.23 16 25 H 0.41 1.49 5.62 -92.71 -0.52 0.97 16 26 H 0.11 -0.23 8.14 -2.39 -0.02 -0.24 16 27 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 28 H 0.40 -3.37 9.12 -74.06 -0.68 -4.04 16 29 H 0.08 0.05 8.14 -2.39 -0.02 0.03 16 30 H 0.13 -0.62 8.14 -2.39 -0.02 -0.64 16 31 H 0.14 0.11 6.40 -2.91 -0.02 0.10 16 32 H 0.11 -0.13 7.96 -2.39 -0.02 -0.15 16 33 H 0.40 -3.80 8.70 -74.06 -0.64 -4.45 16 34 H -0.28 -0.02 7.11 99.48 0.71 0.69 16 35 H -0.30 -1.10 7.11 99.48 0.71 -0.40 16 36 H 0.16 -1.51 4.88 -2.91 -0.01 -1.52 16 37 H 0.17 -1.06 6.30 -2.91 -0.02 -1.08 16 Total: 0.00 -24.29 308.30 -1.62 -25.91 By element: Atomic # 1 Polarization: -10.66 SS G_CDS: -0.67 Total: -11.32 kcal Atomic # 6 Polarization: 7.34 SS G_CDS: 3.35 Total: 10.69 kcal Atomic # 7 Polarization: -4.63 SS G_CDS: -2.26 Total: -6.90 kcal Atomic # 8 Polarization: -12.91 SS G_CDS: -4.08 Total: -16.99 kcal Atomic # 14 Polarization: -3.43 SS G_CDS: 2.04 Total: -1.39 kcal Total: -24.29 -1.62 -25.91 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12496546.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.224 kcal (2) G-P(sol) polarization free energy of solvation -24.293 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.517 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.909 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.133 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds