Wall clock time and date at job start Sun Mar 7 2021 22:00:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86298 * 109.47333 * 2 1 4 4 C 1.50702 * 109.47124 * 240.00051 * 2 1 3 5 5 C 1.35085 * 126.07744 * 105.24622 * 4 2 1 6 6 N 1.35038 * 107.97759 * 180.19784 * 5 4 2 7 7 C 1.46504 * 125.92764 * 179.83222 * 6 5 4 8 8 C 1.50699 * 109.46693 * 124.71669 * 7 6 5 9 9 O 1.21279 * 120.00503 * 0.02562 * 8 7 6 10 10 N 1.34776 * 120.00004 * 179.97438 * 8 7 6 11 11 C 1.46494 * 120.00204 * 180.02562 * 10 8 7 12 12 H 1.08992 * 112.91059 * 23.75071 * 11 10 8 13 13 C 1.53787 * 113.61564 * 155.00348 * 11 10 8 14 14 C 1.53776 * 87.08355 * 89.11555 * 13 11 10 15 15 H 1.09001 * 113.61856 * 140.06546 * 14 13 11 16 16 O 1.42901 * 113.61250 * 270.88433 * 14 13 11 17 17 C 1.53783 * 87.08415 * 25.43000 * 14 13 11 18 18 N 1.40068 * 108.14251 * 359.57338 * 6 5 4 19 19 C 1.31623 * 108.10536 * 0.26457 * 18 6 5 20 20 C 1.48425 * 126.03691 * 179.97438 * 19 18 6 21 21 C 1.39316 * 120.12118 * 136.98692 * 20 19 18 22 22 C 1.38025 * 119.87737 * 179.72043 * 21 20 19 23 23 C 1.38312 * 120.12147 * 0.55226 * 22 21 20 24 24 C 1.38324 * 120.24152 * 359.72174 * 23 22 21 25 25 C 1.38025 * 120.11578 * 0.02562 * 24 23 22 26 26 H 0.96705 * 113.99484 * 299.99938 * 1 2 3 27 27 H 1.09005 * 109.46736 * 120.00229 * 2 1 3 28 28 H 1.48501 * 109.99991 * 178.68017 * 3 2 1 29 29 H 1.48499 * 110.00115 * 300.00290 * 3 2 1 30 30 H 1.07998 * 126.00889 * 0.06050 * 5 4 2 31 31 H 1.09000 * 109.47121 * 4.71906 * 7 6 5 32 32 H 1.08994 * 109.47217 * 244.72026 * 7 6 5 33 33 H 0.97008 * 119.99749 * 359.97438 * 10 8 7 34 34 H 1.09001 * 113.61239 * 334.56625 * 13 11 10 35 35 H 1.09004 * 113.61486 * 203.66093 * 13 11 10 36 36 H 0.96703 * 114.00060 * 179.97438 * 16 14 13 37 37 H 1.09007 * 113.60878 * 89.11238 * 17 14 13 38 38 H 1.08994 * 113.61736 * 219.93671 * 17 14 13 39 39 H 1.08001 * 120.06175 * 359.97060 * 21 20 19 40 40 H 1.08004 * 119.93777 * 180.27487 * 22 21 20 41 41 H 1.07997 * 119.88463 * 179.74692 * 23 22 21 42 42 H 1.07996 * 119.94339 * 180.02562 * 24 23 22 43 43 H 1.07997 * 120.05986 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.4672 -0.1253 -2.3238 6 7 2.7870 -1.0990 -3.2031 7 6 3.3910 -0.9008 -4.5230 8 6 4.6570 -1.7122 -4.6230 9 8 5.0188 -2.3896 -3.6844 10 7 5.3866 -1.6858 -5.7559 11 6 6.6170 -2.4749 -5.8533 12 1 6.6325 -3.3229 -5.1687 13 6 7.0012 -2.8414 -7.2966 14 6 7.7833 -1.5181 -7.3410 15 1 8.7396 -1.5932 -7.8586 16 8 7.0010 -0.4053 -7.7792 17 6 7.8984 -1.6257 -5.8113 18 7 2.4465 -2.3317 -2.6317 19 6 1.9304 -2.1028 -1.4428 20 6 1.4344 -3.1305 -0.4936 21 6 1.7366 -3.0331 0.8629 22 6 1.2679 -3.9885 1.7420 23 6 0.5092 -5.0472 1.2767 24 6 0.2110 -5.1518 -0.0699 25 6 0.6702 -4.1993 -0.9570 26 1 -0.3933 0.4417 0.7651 27 1 1.7923 -0.5139 0.8900 28 1 3.5347 1.7702 0.0321 29 1 1.5615 2.4679 -1.2084 30 1 2.6121 0.9349 -2.4699 31 1 3.6242 0.1550 -4.6611 32 1 2.6915 -1.2222 -5.2947 33 1 5.0966 -1.1448 -6.5071 34 1 6.1528 -2.8703 -7.9803 35 1 7.6347 -3.7255 -7.3688 36 1 7.4874 0.4300 -7.8088 37 1 8.7772 -2.1776 -5.4774 38 1 7.7758 -0.6731 -5.2960 39 1 2.3331 -2.2095 1.2266 40 1 1.4979 -3.9116 2.7945 41 1 0.1479 -5.7947 1.9674 42 1 -0.3822 -5.9803 -0.4279 43 1 0.4365 -4.2816 -2.0081 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12622748.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:32 Heat of formation + Delta-G solvation = 35.793940 kcal Electronic energy + Delta-G solvation = -27760.271583 eV Core-core repulsion = 23775.418859 eV Total energy + Delta-G solvation = -3984.852724 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.42303 -41.34082 -39.81096 -39.44781 -37.54429 -36.20371 -34.78605 -33.91345 -32.28914 -31.77730 -31.31509 -28.82969 -26.94114 -26.10664 -25.36124 -23.91513 -23.27304 -22.01049 -21.50178 -20.75132 -20.70206 -18.89600 -18.40262 -18.21524 -17.98749 -17.51537 -16.83550 -16.64327 -16.45927 -16.05563 -15.83563 -15.48193 -15.40812 -15.19729 -15.04452 -14.78472 -14.44185 -14.20302 -14.12935 -14.03718 -13.78024 -13.66564 -13.43112 -13.27259 -12.82669 -12.59161 -12.47214 -12.15253 -11.98270 -11.78367 -11.62580 -11.58383 -11.15649 -10.89944 -10.50254 -10.11837 -10.08053 -9.68525 -9.65456 -9.16988 -4.99305 0.30592 0.66370 0.83246 1.20688 1.35111 1.46863 1.64504 1.85803 1.98080 2.02062 2.84347 3.07256 3.27679 3.32670 3.44987 3.58601 3.64261 3.66341 3.72395 3.84217 3.88927 3.96018 4.06602 4.21853 4.22337 4.36030 4.40732 4.50712 4.54150 4.64223 4.66515 4.70282 4.72862 4.82027 4.85883 4.86716 4.93610 5.13343 5.27482 5.42852 5.46731 5.73468 5.75785 5.78324 5.84354 6.19702 6.36174 6.47228 6.70309 6.81022 7.11774 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.030 4.030 3 Si 0.679 3.321 4 C -0.203 4.203 5 C 0.059 3.941 6 N -0.357 5.357 7 C 0.117 3.883 8 C 0.500 3.500 9 O -0.506 6.506 10 N -0.705 5.705 11 C 0.126 3.874 12 H 0.104 0.896 13 C -0.141 4.141 14 C 0.077 3.923 15 H 0.073 0.927 16 O -0.555 6.555 17 C -0.185 4.185 18 N -0.245 5.245 19 C 0.133 3.867 20 C -0.005 4.005 21 C -0.095 4.095 22 C -0.119 4.119 23 C -0.114 4.114 24 C -0.120 4.120 25 C -0.091 4.091 26 H 0.378 0.622 27 H 0.071 0.929 28 H -0.256 1.256 29 H -0.253 1.253 30 H 0.172 0.828 31 H 0.127 0.873 32 H 0.120 0.880 33 H 0.408 0.592 34 H 0.084 0.916 35 H 0.111 0.889 36 H 0.385 0.615 37 H 0.100 0.900 38 H 0.076 0.924 39 H 0.124 0.876 40 H 0.126 0.874 41 H 0.124 0.876 42 H 0.125 0.875 43 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.580 4.504 -0.959 4.869 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.142 4.142 3 Si 0.580 3.420 4 C -0.214 4.214 5 C -0.086 4.086 6 N -0.138 5.138 7 C -0.009 4.009 8 C 0.283 3.717 9 O -0.379 6.379 10 N -0.359 5.359 11 C 0.021 3.979 12 H 0.122 0.878 13 C -0.179 4.179 14 C 0.018 3.982 15 H 0.091 0.909 16 O -0.361 6.361 17 C -0.224 4.224 18 N -0.065 5.065 19 C -0.034 4.034 20 C -0.007 4.007 21 C -0.114 4.114 22 C -0.137 4.137 23 C -0.132 4.132 24 C -0.138 4.138 25 C -0.110 4.110 26 H 0.225 0.775 27 H 0.089 0.911 28 H -0.181 1.181 29 H -0.178 1.178 30 H 0.189 0.811 31 H 0.145 0.855 32 H 0.138 0.862 33 H 0.245 0.755 34 H 0.103 0.897 35 H 0.129 0.871 36 H 0.234 0.766 37 H 0.118 0.882 38 H 0.095 0.905 39 H 0.142 0.858 40 H 0.144 0.856 41 H 0.142 0.858 42 H 0.143 0.857 43 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 2.363 3.008 -2.343 4.485 hybrid contribution 0.332 0.928 -0.156 0.998 sum 2.695 3.935 -2.499 5.385 Atomic orbital electron populations 1.86547 1.17454 1.81704 1.49196 1.23984 0.85416 1.08888 0.95923 0.95315 0.80881 0.77855 0.87908 1.19382 1.11972 0.92463 0.97585 1.22134 1.01026 0.95052 0.90379 1.47811 1.48131 1.04256 1.13638 1.21512 0.94233 1.02336 0.82808 1.20525 0.84994 0.82893 0.83239 1.90824 1.69847 1.40116 1.37119 1.45562 1.24586 1.49079 1.16661 1.21750 0.83601 0.94635 0.97940 0.87783 1.23455 1.01343 0.96678 0.96418 1.22803 0.94212 0.87519 0.93667 0.90924 1.86344 1.41378 1.19339 1.89048 1.24142 0.98885 1.01879 0.97480 1.77802 1.18227 1.01422 1.09077 1.20633 0.97870 0.92227 0.92640 1.17687 0.98556 0.93069 0.91360 1.21108 0.99402 0.99072 0.91865 1.21060 0.98389 0.94633 0.99655 1.21251 0.98137 0.98091 0.95717 1.21102 1.00265 0.98982 0.93449 1.21177 0.96702 0.93186 0.99932 0.77528 0.91082 1.18069 1.17776 0.81126 0.85517 0.86194 0.75522 0.89738 0.87111 0.76632 0.88176 0.90524 0.85801 0.85569 0.85823 0.85694 0.85914 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.92 12.86 -35.23 -0.45 -1.37 16 2 C -0.03 -0.05 2.51 36.01 0.09 0.04 16 3 Si 0.68 -0.38 30.77 -169.99 -5.23 -5.61 16 4 C -0.20 -0.94 5.39 -104.76 -0.56 -1.51 16 5 C 0.06 0.21 9.96 -17.26 -0.17 0.04 16 6 N -0.36 -1.53 3.40 -62.58 -0.21 -1.75 16 7 C 0.12 0.02 6.99 -5.19 -0.04 -0.02 16 8 C 0.50 1.35 7.86 -10.99 -0.09 1.27 16 9 O -0.51 -3.91 15.30 5.56 0.09 -3.82 16 10 N -0.70 -0.04 5.15 -53.02 -0.27 -0.32 16 11 C 0.13 0.03 4.32 -67.12 -0.29 -0.26 16 12 H 0.10 0.24 7.47 -51.93 -0.39 -0.15 16 13 C -0.14 0.23 7.66 -25.92 -0.20 0.03 16 14 C 0.08 -0.16 5.28 -25.92 -0.14 -0.30 16 15 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 16 O -0.55 1.19 12.31 -35.23 -0.43 0.76 16 17 C -0.18 0.20 7.71 -25.91 -0.20 0.00 16 18 N -0.25 -1.78 11.67 33.43 0.39 -1.39 16 19 C 0.13 0.86 6.67 -82.77 -0.55 0.30 16 20 C 0.00 -0.03 5.74 -104.90 -0.60 -0.63 16 21 C -0.10 -0.33 8.88 -39.26 -0.35 -0.68 16 22 C -0.12 -0.25 10.03 -39.63 -0.40 -0.65 16 23 C -0.11 -0.24 10.04 -39.52 -0.40 -0.63 16 24 C -0.12 -0.35 10.03 -39.63 -0.40 -0.75 16 25 C -0.09 -0.43 9.78 -39.26 -0.38 -0.81 16 26 H 0.38 -1.32 8.74 45.56 0.40 -0.92 16 27 H 0.07 0.02 5.57 -51.93 -0.29 -0.27 16 28 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 29 H -0.25 -0.42 7.04 56.52 0.40 -0.02 16 30 H 0.17 0.13 6.35 -52.49 -0.33 -0.20 16 31 H 0.13 -0.46 8.07 -51.93 -0.42 -0.88 16 32 H 0.12 -0.24 8.14 -51.93 -0.42 -0.66 16 33 H 0.41 -0.78 7.59 -40.82 -0.31 -1.09 16 34 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 35 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 36 H 0.39 -2.12 9.12 45.56 0.42 -1.71 16 37 H 0.10 -0.18 8.14 -51.92 -0.42 -0.60 16 38 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 39 H 0.12 0.24 6.23 -52.49 -0.33 -0.08 16 40 H 0.13 -0.04 8.06 -52.48 -0.42 -0.47 16 41 H 0.12 -0.02 8.06 -52.49 -0.42 -0.44 16 42 H 0.13 0.11 8.06 -52.49 -0.42 -0.32 16 43 H 0.12 0.55 8.06 -52.49 -0.42 0.13 16 LS Contribution 364.68 15.07 5.50 5.50 Total: 0.00 -12.71 364.68 -9.99 -22.69 By element: Atomic # 1 Polarization: -5.47 SS G_CDS: -4.68 Total: -10.15 kcal Atomic # 6 Polarization: 0.14 SS G_CDS: -4.67 Total: -4.54 kcal Atomic # 7 Polarization: -3.36 SS G_CDS: -0.10 Total: -3.45 kcal Atomic # 8 Polarization: -3.64 SS G_CDS: -0.80 Total: -4.44 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.23 Total: -5.61 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -12.71 -9.99 -22.69 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12622748.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.487 kcal (2) G-P(sol) polarization free energy of solvation -12.707 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.780 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.986 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.693 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.794 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds