Wall clock time and date at job start Sun Mar 7 2021 22:00:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86298 * 109.47333 * 2 1 4 4 C 1.50702 * 109.47124 * 240.00051 * 2 1 3 5 5 C 1.35085 * 126.07744 * 105.24622 * 4 2 1 6 6 N 1.35038 * 107.97759 * 180.19784 * 5 4 2 7 7 C 1.46504 * 125.92764 * 179.83222 * 6 5 4 8 8 C 1.50699 * 109.46693 * 124.71669 * 7 6 5 9 9 O 1.21279 * 120.00503 * 0.02562 * 8 7 6 10 10 N 1.34776 * 120.00004 * 179.97438 * 8 7 6 11 11 C 1.46494 * 120.00204 * 180.02562 * 10 8 7 12 12 H 1.08992 * 112.91059 * 23.75071 * 11 10 8 13 13 C 1.53787 * 113.61564 * 155.00348 * 11 10 8 14 14 C 1.53776 * 87.08355 * 89.11555 * 13 11 10 15 15 H 1.09001 * 113.61856 * 140.06546 * 14 13 11 16 16 O 1.42901 * 113.61250 * 270.88433 * 14 13 11 17 17 C 1.53783 * 87.08415 * 25.43000 * 14 13 11 18 18 N 1.40068 * 108.14251 * 359.57338 * 6 5 4 19 19 C 1.31623 * 108.10536 * 0.26457 * 18 6 5 20 20 C 1.48425 * 126.03691 * 179.97438 * 19 18 6 21 21 C 1.39316 * 120.12118 * 136.98692 * 20 19 18 22 22 C 1.38025 * 119.87737 * 179.72043 * 21 20 19 23 23 C 1.38312 * 120.12147 * 0.55226 * 22 21 20 24 24 C 1.38324 * 120.24152 * 359.72174 * 23 22 21 25 25 C 1.38025 * 120.11578 * 0.02562 * 24 23 22 26 26 H 0.96705 * 113.99484 * 299.99938 * 1 2 3 27 27 H 1.09005 * 109.46736 * 120.00229 * 2 1 3 28 28 H 1.48501 * 109.99991 * 178.68017 * 3 2 1 29 29 H 1.48499 * 110.00115 * 300.00290 * 3 2 1 30 30 H 1.07998 * 126.00889 * 0.06050 * 5 4 2 31 31 H 1.09000 * 109.47121 * 4.71906 * 7 6 5 32 32 H 1.08994 * 109.47217 * 244.72026 * 7 6 5 33 33 H 0.97008 * 119.99749 * 359.97438 * 10 8 7 34 34 H 1.09001 * 113.61239 * 334.56625 * 13 11 10 35 35 H 1.09004 * 113.61486 * 203.66093 * 13 11 10 36 36 H 0.96703 * 114.00060 * 179.97438 * 16 14 13 37 37 H 1.09007 * 113.60878 * 89.11238 * 17 14 13 38 38 H 1.08994 * 113.61736 * 219.93671 * 17 14 13 39 39 H 1.08001 * 120.06175 * 359.97060 * 21 20 19 40 40 H 1.08004 * 119.93777 * 180.27487 * 22 21 20 41 41 H 1.07997 * 119.88463 * 179.74692 * 23 22 21 42 42 H 1.07996 * 119.94339 * 180.02562 * 24 23 22 43 43 H 1.07997 * 120.05986 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.4672 -0.1253 -2.3238 6 7 2.7870 -1.0990 -3.2031 7 6 3.3910 -0.9008 -4.5230 8 6 4.6570 -1.7122 -4.6230 9 8 5.0188 -2.3896 -3.6844 10 7 5.3866 -1.6858 -5.7559 11 6 6.6170 -2.4749 -5.8533 12 1 6.6325 -3.3229 -5.1687 13 6 7.0012 -2.8414 -7.2966 14 6 7.7833 -1.5181 -7.3410 15 1 8.7396 -1.5932 -7.8586 16 8 7.0010 -0.4053 -7.7792 17 6 7.8984 -1.6257 -5.8113 18 7 2.4465 -2.3317 -2.6317 19 6 1.9304 -2.1028 -1.4428 20 6 1.4344 -3.1305 -0.4936 21 6 1.7366 -3.0331 0.8629 22 6 1.2679 -3.9885 1.7420 23 6 0.5092 -5.0472 1.2767 24 6 0.2110 -5.1518 -0.0699 25 6 0.6702 -4.1993 -0.9570 26 1 -0.3933 0.4417 0.7651 27 1 1.7923 -0.5139 0.8900 28 1 3.5347 1.7702 0.0321 29 1 1.5615 2.4679 -1.2084 30 1 2.6121 0.9349 -2.4699 31 1 3.6242 0.1550 -4.6611 32 1 2.6915 -1.2222 -5.2947 33 1 5.0966 -1.1448 -6.5071 34 1 6.1528 -2.8703 -7.9803 35 1 7.6347 -3.7255 -7.3688 36 1 7.4874 0.4300 -7.8088 37 1 8.7772 -2.1776 -5.4774 38 1 7.7758 -0.6731 -5.2960 39 1 2.3331 -2.2095 1.2266 40 1 1.4979 -3.9116 2.7945 41 1 0.1479 -5.7947 1.9674 42 1 -0.3822 -5.9803 -0.4279 43 1 0.4365 -4.2816 -2.0081 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_12622748.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:31 Heat of formation + Delta-G solvation = 29.459951 kcal Electronic energy + Delta-G solvation = -27760.546245 eV Core-core repulsion = 23775.418859 eV Total energy + Delta-G solvation = -3985.127387 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.66183 -41.40178 -39.95536 -39.59878 -37.61933 -36.12078 -34.99629 -34.00270 -32.49708 -31.96646 -31.53701 -28.97577 -26.84981 -26.21233 -25.41541 -24.08984 -23.47298 -22.15198 -21.72220 -20.97266 -20.68834 -18.90773 -18.54500 -18.30085 -17.94980 -17.67771 -16.92427 -16.79304 -16.44060 -16.21454 -16.01658 -15.61358 -15.51516 -15.26290 -15.14933 -14.89567 -14.58460 -14.36741 -14.31006 -14.11336 -13.77438 -13.63814 -13.61700 -13.37566 -12.76987 -12.69503 -12.40401 -12.30931 -12.16471 -11.94171 -11.80339 -11.54997 -11.41553 -10.81120 -10.71996 -10.21843 -10.15107 -9.94029 -9.88207 -9.40749 -4.94762 0.05162 0.44039 0.60401 1.08905 1.29808 1.34475 1.52136 1.72266 1.91967 1.98439 2.84862 3.03385 3.18263 3.40618 3.41383 3.42371 3.63783 3.75392 3.77702 3.80121 3.91528 3.93398 4.02914 4.07114 4.08168 4.23198 4.26557 4.43505 4.52296 4.61443 4.64146 4.67324 4.73850 4.78885 4.79242 4.89081 4.92227 4.94968 5.08514 5.19764 5.43007 5.51939 5.54814 5.55573 5.68281 6.01194 6.33046 6.40975 6.79904 7.01347 7.01626 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.564 6.564 2 C -0.047 4.047 3 Si 0.785 3.215 4 C -0.225 4.225 5 C 0.055 3.945 6 N -0.360 5.360 7 C 0.110 3.890 8 C 0.497 3.503 9 O -0.566 6.566 10 N -0.689 5.689 11 C 0.110 3.890 12 H 0.075 0.925 13 C -0.136 4.136 14 C 0.088 3.912 15 H 0.090 0.910 16 O -0.566 6.566 17 C -0.181 4.181 18 N -0.289 5.289 19 C 0.112 3.888 20 C -0.029 4.029 21 C -0.104 4.104 22 C -0.118 4.118 23 C -0.115 4.115 24 C -0.125 4.125 25 C -0.114 4.114 26 H 0.398 0.602 27 H 0.078 0.922 28 H -0.292 1.292 29 H -0.279 1.279 30 H 0.198 0.802 31 H 0.170 0.830 32 H 0.142 0.858 33 H 0.420 0.580 34 H 0.081 0.919 35 H 0.123 0.877 36 H 0.400 0.600 37 H 0.106 0.894 38 H 0.067 0.933 39 H 0.133 0.867 40 H 0.155 0.845 41 H 0.151 0.849 42 H 0.142 0.858 43 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.594 5.820 -0.839 6.092 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.157 4.157 3 Si 0.688 3.312 4 C -0.237 4.237 5 C -0.090 4.090 6 N -0.142 5.142 7 C -0.014 4.014 8 C 0.282 3.718 9 O -0.443 6.443 10 N -0.342 5.342 11 C 0.004 3.996 12 H 0.093 0.907 13 C -0.173 4.173 14 C 0.028 3.972 15 H 0.108 0.892 16 O -0.374 6.374 17 C -0.220 4.220 18 N -0.110 5.110 19 C -0.053 4.053 20 C -0.031 4.031 21 C -0.124 4.124 22 C -0.135 4.135 23 C -0.134 4.134 24 C -0.143 4.143 25 C -0.133 4.133 26 H 0.249 0.751 27 H 0.096 0.904 28 H -0.220 1.220 29 H -0.205 1.205 30 H 0.215 0.785 31 H 0.187 0.813 32 H 0.160 0.840 33 H 0.259 0.741 34 H 0.100 0.900 35 H 0.142 0.858 36 H 0.251 0.749 37 H 0.124 0.876 38 H 0.086 0.914 39 H 0.151 0.849 40 H 0.172 0.828 41 H 0.169 0.831 42 H 0.160 0.840 43 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges 2.357 4.333 -2.250 5.421 hybrid contribution 0.345 0.488 -0.234 0.642 sum 2.702 4.821 -2.484 6.059 Atomic orbital electron populations 1.86492 1.17624 1.82436 1.50778 1.24358 0.85508 1.10880 0.94932 0.94133 0.77089 0.74212 0.85770 1.19901 1.12446 0.92112 0.99202 1.22605 1.00350 0.96053 0.90025 1.48103 1.47805 1.03563 1.14688 1.21948 0.93181 1.04413 0.81837 1.20993 0.85584 0.82287 0.82893 1.90800 1.71475 1.42808 1.39227 1.45479 1.24118 1.48408 1.16229 1.21885 0.84389 0.94466 0.98879 0.90659 1.23479 1.01519 0.97840 0.94495 1.22719 0.94640 0.87191 0.92615 0.89236 1.86306 1.42117 1.20159 1.88857 1.24130 0.98113 1.01066 0.98660 1.77695 1.19620 1.03528 1.10145 1.21007 0.97978 0.93554 0.92779 1.17952 0.99396 0.93447 0.92266 1.21310 0.99729 0.99957 0.91361 1.21429 0.97437 0.93871 1.00800 1.21616 0.97532 0.98549 0.95657 1.21363 1.00173 0.98911 0.93870 1.21243 0.97967 0.94221 0.99865 0.75114 0.90391 1.21971 1.20526 0.78530 0.81264 0.83997 0.74110 0.90043 0.85843 0.74871 0.87603 0.91382 0.84898 0.82780 0.83146 0.83989 0.87156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.10 12.86 -148.98 -1.92 -4.01 16 2 C -0.05 -0.17 2.51 71.24 0.18 0.01 16 3 Si 0.78 -1.33 30.77 68.60 2.11 0.78 16 4 C -0.23 -2.44 5.39 -19.95 -0.11 -2.55 16 5 C 0.05 0.44 9.96 83.47 0.83 1.28 16 6 N -0.36 -3.66 3.40 -351.92 -1.20 -4.86 16 7 C 0.11 0.09 6.99 85.63 0.60 0.68 16 8 C 0.50 3.53 7.86 87.66 0.69 4.22 16 9 O -0.57 -10.58 15.30 -3.02 -0.05 -10.63 16 10 N -0.69 -0.73 5.15 -440.04 -2.27 -3.00 16 11 C 0.11 0.21 4.32 45.52 0.20 0.41 16 12 H 0.08 0.58 7.47 -2.39 -0.02 0.57 16 13 C -0.14 0.42 7.66 31.12 0.24 0.66 16 14 C 0.09 -0.44 5.28 31.12 0.16 -0.27 16 15 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 16 O -0.57 3.07 12.31 -148.98 -1.83 1.23 16 17 C -0.18 0.31 7.71 31.12 0.24 0.55 16 18 N -0.29 -5.08 11.67 -48.15 -0.56 -5.65 16 19 C 0.11 1.76 6.67 42.53 0.28 2.05 16 20 C -0.03 -0.38 5.74 -20.04 -0.12 -0.50 16 21 C -0.10 -0.85 8.88 22.48 0.20 -0.65 16 22 C -0.12 -0.46 10.03 22.24 0.22 -0.23 16 23 C -0.12 -0.43 10.04 22.31 0.22 -0.21 16 24 C -0.13 -0.86 10.03 22.24 0.22 -0.63 16 25 C -0.11 -1.38 9.78 22.48 0.22 -1.16 16 26 H 0.40 -2.93 8.74 -74.05 -0.65 -3.58 16 27 H 0.08 0.09 5.57 -2.38 -0.01 0.08 16 28 H -0.29 -1.25 7.11 99.48 0.71 -0.54 16 29 H -0.28 -0.67 7.04 99.48 0.70 0.03 16 30 H 0.20 0.24 6.35 -2.91 -0.02 0.22 16 31 H 0.17 -1.45 8.07 -2.39 -0.02 -1.47 16 32 H 0.14 -0.56 8.14 -2.39 -0.02 -0.58 16 33 H 0.42 -1.64 7.59 -92.70 -0.70 -2.35 16 34 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 35 H 0.12 -0.72 8.14 -2.38 -0.02 -0.74 16 36 H 0.40 -4.95 9.12 -74.06 -0.68 -5.63 16 37 H 0.11 -0.33 8.14 -2.38 -0.02 -0.34 16 38 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 39 H 0.13 0.68 6.23 -2.91 -0.02 0.66 16 40 H 0.15 -0.35 8.06 -2.91 -0.02 -0.38 16 41 H 0.15 -0.30 8.06 -2.91 -0.02 -0.32 16 42 H 0.14 0.32 8.06 -2.91 -0.02 0.30 16 43 H 0.11 1.45 8.06 -2.91 -0.02 1.42 16 Total: 0.00 -33.73 364.68 -2.34 -36.07 By element: Atomic # 1 Polarization: -12.67 SS G_CDS: -0.92 Total: -13.59 kcal Atomic # 6 Polarization: -0.65 SS G_CDS: 4.29 Total: 3.64 kcal Atomic # 7 Polarization: -9.48 SS G_CDS: -4.03 Total: -13.50 kcal Atomic # 8 Polarization: -9.61 SS G_CDS: -3.80 Total: -13.41 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: 2.11 Total: 0.78 kcal Total: -33.73 -2.34 -36.07 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12622748.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.534 kcal (2) G-P(sol) polarization free energy of solvation -33.735 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.799 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.339 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.074 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.460 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds