Wall clock time and date at job start Sun Mar 7 2021 22:00:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35885 * 116.99872 * 2 1 4 4 C 1.38825 * 119.93946 * 180.02562 * 3 2 1 5 5 C 1.37918 * 120.06417 * 180.02562 * 4 3 2 6 6 C 1.39348 * 119.94193 * 359.97438 * 5 4 3 7 7 C 1.48409 * 120.06916 * 179.97438 * 6 5 4 8 8 N 1.31620 * 126.03502 * 317.17862 * 7 6 5 9 9 N 1.40074 * 108.10543 * 180.02562 * 8 7 6 10 10 C 1.46503 * 125.92739 * 180.02562 * 9 8 7 11 11 C 1.50697 * 109.47094 * 305.02572 * 10 9 8 12 12 O 1.21278 * 120.00235 * 359.97438 * 11 10 9 13 13 N 1.34778 * 120.00057 * 180.02562 * 11 10 9 14 14 C 1.46498 * 120.00008 * 179.97438 * 13 11 10 15 15 H 1.08992 * 112.85054 * 23.80427 * 14 13 11 16 16 C 1.53784 * 113.61046 * 155.00318 * 14 13 11 17 17 C 1.53781 * 87.08532 * 89.20039 * 16 14 13 18 18 H 1.08993 * 113.61291 * 140.05831 * 17 16 14 19 19 O 1.42894 * 113.61396 * 270.88302 * 17 16 14 20 20 C 1.53784 * 87.08052 * 25.42884 * 17 16 14 21 21 C 1.35028 * 108.14216 * 0.26418 * 9 8 7 22 22 C 1.35089 * 107.98153 * 359.57294 * 21 9 8 23 23 C 1.50700 * 126.07922 * 180.12550 * 22 21 9 24 24 O 1.42905 * 109.46805 * 105.23492 * 23 22 21 25 25 Si 1.86298 * 109.47078 * 345.23392 * 23 22 21 26 26 C 1.39357 * 119.86920 * 0.25701 * 6 5 4 27 27 C 1.37929 * 119.93488 * 359.51284 * 26 6 5 28 28 H 1.09004 * 109.47099 * 299.99397 * 1 2 3 29 29 H 1.08995 * 109.47034 * 59.99763 * 1 2 3 30 30 H 1.09003 * 109.46647 * 180.02562 * 1 2 3 31 31 H 1.08005 * 119.96223 * 359.97438 * 4 3 2 32 32 H 1.08003 * 120.03057 * 180.02562 * 5 4 3 33 33 H 1.08997 * 109.46832 * 185.02834 * 10 9 8 34 34 H 1.09000 * 109.47018 * 65.02803 * 10 9 8 35 35 H 0.97006 * 119.99668 * 359.97438 * 13 11 10 36 36 H 1.08998 * 113.61636 * 334.64380 * 16 14 13 37 37 H 1.09010 * 113.68425 * 203.76310 * 16 14 13 38 38 H 0.96702 * 114.00538 * 179.97438 * 19 17 16 39 39 H 1.09001 * 113.61184 * 89.11600 * 20 17 16 40 40 H 1.08996 * 113.61901 * 220.02410 * 20 17 16 41 41 H 1.08003 * 126.01290 * 179.73953 * 21 9 8 42 42 H 1.09003 * 109.47273 * 225.22896 * 23 22 21 43 43 H 0.96698 * 113.99798 * 299.99862 * 24 23 22 44 44 H 1.48498 * 109.99792 * 180.02562 * 25 23 22 45 45 H 1.48502 * 109.99942 * 301.31676 * 25 23 22 46 46 H 1.08003 * 120.03366 * 179.72114 * 26 6 5 47 47 H 1.07996 * 119.96661 * 180.23141 * 27 26 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4323 1.2820 -0.0005 5 6 4.0611 2.5095 0.0000 6 6 3.3035 3.6790 0.0005 7 6 3.9771 5.0014 0.0017 8 7 5.0240 5.3364 0.7257 9 7 5.3469 6.6679 0.4341 10 6 6.4486 7.4339 1.0221 11 6 6.3340 7.4061 2.5245 12 8 5.4217 6.8061 3.0521 13 7 7.2449 8.0490 3.2818 14 6 7.1332 8.0225 4.7422 15 1 6.5707 7.1636 5.1082 16 6 8.4731 8.2354 5.4664 17 6 8.1693 9.7422 5.4194 18 1 8.4444 10.2717 6.3315 19 8 8.6491 10.3863 4.2376 20 6 6.6812 9.3601 5.3517 21 6 4.4632 7.1245 -0.4791 22 6 3.6088 6.1197 -0.7714 23 6 2.4612 6.1859 -1.7458 24 8 2.8068 5.4769 -2.9375 25 14 2.1032 7.9657 -2.1638 26 6 1.9119 3.6045 0.0060 27 6 1.2885 2.3741 0.0006 28 1 -0.3633 0.5138 0.8901 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 4.0190 0.3752 -0.0005 32 1 5.1397 2.5643 -0.0008 33 1 6.4008 8.4654 0.6731 34 1 7.3989 6.9923 0.7219 35 1 7.9745 8.5293 2.8597 36 1 9.3407 7.9462 4.8734 37 1 8.4950 7.8256 6.4763 38 1 8.4607 11.3341 4.2020 39 1 6.2118 9.2576 6.3301 40 1 6.1022 9.9788 4.6661 41 1 4.4445 8.1175 -0.9034 42 1 1.5770 5.7330 -1.2972 43 1 3.5864 5.8260 -3.3907 44 1 0.9728 8.0445 -3.1236 45 1 1.7735 8.7211 -0.9285 46 1 1.3221 4.5093 0.0109 47 1 0.2101 2.3158 0.0010 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12622750.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:36 Heat of formation + Delta-G solvation = -0.736456 kcal Electronic energy + Delta-G solvation = -31825.418329 eV Core-core repulsion = 27364.761717 eV Total energy + Delta-G solvation = -4460.656612 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.39434 -41.33321 -40.79664 -39.61448 -38.24767 -37.55452 -36.18886 -34.59183 -33.83226 -32.14515 -31.82474 -30.96363 -28.95615 -27.92267 -26.93175 -26.13582 -25.25649 -23.63602 -23.43001 -21.98063 -21.46774 -20.84710 -20.70480 -19.00912 -18.93697 -18.49104 -18.03024 -17.32877 -17.07721 -16.95884 -16.55477 -16.51158 -16.44564 -16.13704 -15.92318 -15.53118 -15.41933 -15.19423 -14.99712 -14.73124 -14.57330 -14.29253 -14.20481 -13.88004 -13.85999 -13.75570 -13.50519 -13.25942 -12.95466 -12.81455 -12.66793 -12.46435 -12.31165 -12.09971 -12.01408 -11.62976 -11.61378 -11.53199 -11.07917 -10.88525 -10.34252 -10.15352 -10.09562 -9.80322 -9.53479 -8.75300 -5.06153 0.34220 0.57050 0.86657 1.27555 1.38900 1.49593 1.66351 1.88108 2.01964 2.04066 2.44403 2.85354 3.00439 3.31898 3.36135 3.47151 3.62482 3.66273 3.69092 3.70587 3.80012 3.91089 3.95694 3.96993 4.06639 4.22760 4.25901 4.31326 4.46850 4.51197 4.51739 4.55173 4.62846 4.64385 4.67459 4.74131 4.78234 4.82940 4.86798 4.87640 4.95058 5.20695 5.24573 5.47972 5.48250 5.72527 5.73912 5.89513 5.90418 6.37962 6.48643 6.55143 6.74529 6.78209 7.14397 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.317 6.317 3 C 0.135 3.865 4 C -0.151 4.151 5 C -0.050 4.050 6 C -0.044 4.044 7 C 0.137 3.863 8 N -0.249 5.249 9 N -0.358 5.358 10 C 0.117 3.883 11 C 0.499 3.501 12 O -0.507 6.507 13 N -0.705 5.705 14 C 0.127 3.873 15 H 0.104 0.896 16 C -0.141 4.141 17 C 0.077 3.923 18 H 0.072 0.928 19 O -0.554 6.554 20 C -0.185 4.185 21 C 0.064 3.936 22 C -0.253 4.253 23 C -0.027 4.027 24 O -0.538 6.538 25 Si 0.680 3.320 26 C -0.052 4.052 27 C -0.207 4.207 28 H 0.056 0.944 29 H 0.057 0.943 30 H 0.101 0.899 31 H 0.134 0.866 32 H 0.132 0.868 33 H 0.129 0.871 34 H 0.119 0.881 35 H 0.408 0.592 36 H 0.084 0.916 37 H 0.110 0.890 38 H 0.385 0.615 39 H 0.099 0.901 40 H 0.076 0.924 41 H 0.180 0.820 42 H 0.111 0.889 43 H 0.375 0.625 44 H -0.254 1.254 45 H -0.257 1.257 46 H 0.124 0.876 47 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.940 6.783 -0.396 7.854 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.230 6.230 3 C 0.089 3.911 4 C -0.170 4.170 5 C -0.069 4.069 6 C -0.046 4.046 7 C -0.030 4.030 8 N -0.070 5.070 9 N -0.140 5.140 10 C -0.008 4.008 11 C 0.283 3.717 12 O -0.380 6.380 13 N -0.359 5.359 14 C 0.021 3.979 15 H 0.122 0.878 16 C -0.179 4.179 17 C 0.018 3.982 18 H 0.090 0.910 19 O -0.361 6.361 20 C -0.224 4.224 21 C -0.081 4.081 22 C -0.265 4.265 23 C -0.139 4.139 24 O -0.342 6.342 25 Si 0.581 3.419 26 C -0.071 4.071 27 C -0.226 4.226 28 H 0.075 0.925 29 H 0.075 0.925 30 H 0.119 0.881 31 H 0.152 0.848 32 H 0.150 0.850 33 H 0.147 0.853 34 H 0.137 0.863 35 H 0.245 0.755 36 H 0.103 0.897 37 H 0.128 0.872 38 H 0.234 0.766 39 H 0.118 0.882 40 H 0.095 0.905 41 H 0.196 0.804 42 H 0.128 0.872 43 H 0.222 0.778 44 H -0.178 1.178 45 H -0.181 1.181 46 H 0.142 0.858 47 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 3.424 5.580 0.961 6.616 hybrid contribution -0.729 0.973 -0.108 1.220 sum 2.695 6.553 0.852 7.136 Atomic orbital electron populations 1.23096 0.78149 1.04171 1.01495 1.86079 1.21596 1.26881 1.88425 1.19125 0.92372 0.84165 0.95461 1.20354 0.91338 0.98575 1.06737 1.20958 0.99916 0.90377 0.95663 1.17557 0.92228 0.89090 1.05732 1.20502 0.94147 0.93691 0.94613 1.77815 1.16644 0.91841 1.20652 1.47845 1.24198 1.09552 1.32382 1.21495 0.90067 0.97547 0.91728 1.20570 0.82722 0.79363 0.89090 1.90829 1.32355 1.41121 1.73648 1.45567 1.30077 1.54207 1.06088 1.21737 0.97475 0.98844 0.79850 0.87841 1.23454 0.98042 0.94193 1.02238 1.22798 0.93375 0.94068 0.87952 0.90975 1.86340 1.81363 1.26924 1.41447 1.24139 0.97559 0.98265 1.02415 1.22200 0.91825 0.99631 0.94421 1.20444 1.04146 0.94029 1.07833 1.24377 0.96254 1.08063 0.85192 1.86524 1.51032 1.59421 1.37257 0.95372 0.87573 0.76462 0.82453 1.20839 0.93113 0.97120 0.96063 1.21118 1.00152 0.91953 1.09346 0.92542 0.92452 0.88062 0.84793 0.85048 0.85334 0.86321 0.75536 0.89741 0.87170 0.76636 0.88233 0.90489 0.80350 0.87229 0.77823 1.17806 1.18123 0.85790 0.85116 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 9.81 101.05 0.99 1.00 16 2 O -0.32 -1.20 10.49 -19.38 -0.20 -1.40 16 3 C 0.13 0.57 6.69 -39.15 -0.26 0.31 16 4 C -0.15 -0.61 9.97 -39.48 -0.39 -1.01 16 5 C -0.05 -0.22 9.77 -39.29 -0.38 -0.60 16 6 C -0.04 -0.22 5.74 -104.88 -0.60 -0.82 16 7 C 0.14 0.67 6.66 -82.78 -0.55 0.12 16 8 N -0.25 -1.39 11.67 33.43 0.39 -1.00 16 9 N -0.36 -0.70 3.40 -62.58 -0.21 -0.91 16 10 C 0.12 -0.20 6.99 -5.19 -0.04 -0.24 16 11 C 0.50 0.78 7.86 -10.99 -0.09 0.69 16 12 O -0.51 -3.47 15.30 5.56 0.09 -3.38 16 13 N -0.71 0.58 5.15 -53.02 -0.27 0.31 16 14 C 0.13 -0.04 4.32 -67.12 -0.29 -0.33 16 15 H 0.10 0.19 7.46 -51.93 -0.39 -0.20 16 16 C -0.14 0.29 7.66 -25.92 -0.20 0.09 16 17 C 0.08 -0.20 5.28 -25.92 -0.14 -0.34 16 18 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 19 O -0.55 1.54 12.32 -35.23 -0.43 1.11 16 20 C -0.18 0.29 7.71 -25.92 -0.20 0.09 16 21 C 0.06 0.01 9.96 -17.27 -0.17 -0.16 16 22 C -0.25 -0.56 5.35 -104.75 -0.56 -1.12 16 23 C -0.03 -0.03 2.52 36.01 0.09 0.06 16 24 O -0.54 -0.79 12.88 -35.23 -0.45 -1.24 16 25 Si 0.68 -0.57 30.74 -169.99 -5.22 -5.79 16 26 C -0.05 -0.21 8.87 -39.28 -0.35 -0.56 16 27 C -0.21 -0.70 9.02 -39.48 -0.36 -1.05 16 28 H 0.06 -0.03 7.65 -51.93 -0.40 -0.43 16 29 H 0.06 -0.04 7.66 -51.93 -0.40 -0.43 16 30 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.13 0.34 8.06 -52.48 -0.42 -0.08 16 32 H 0.13 0.45 8.06 -52.48 -0.42 0.02 16 33 H 0.13 -0.76 8.07 -51.93 -0.42 -1.18 16 34 H 0.12 -0.45 8.14 -51.93 -0.42 -0.87 16 35 H 0.41 -1.16 7.60 -40.82 -0.31 -1.47 16 36 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.11 -0.36 8.14 -51.92 -0.42 -0.78 16 38 H 0.39 -2.36 9.12 45.56 0.42 -1.94 16 39 H 0.10 -0.21 8.14 -51.93 -0.42 -0.64 16 40 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.18 -0.76 6.40 -52.48 -0.34 -1.09 16 42 H 0.11 0.21 5.56 -51.93 -0.29 -0.08 16 43 H 0.38 -0.96 8.70 45.56 0.40 -0.57 16 44 H -0.25 -0.61 7.11 56.52 0.40 -0.20 16 45 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 46 H 0.12 0.33 6.23 -52.48 -0.33 0.00 16 47 H 0.13 0.15 6.28 -52.49 -0.33 -0.18 16 LS Contribution 394.18 15.07 5.94 5.94 Total: 0.00 -13.43 394.18 -9.27 -22.70 By element: Atomic # 1 Polarization: -7.08 SS G_CDS: -5.38 Total: -12.46 kcal Atomic # 6 Polarization: -0.36 SS G_CDS: -3.50 Total: -3.86 kcal Atomic # 7 Polarization: -1.51 SS G_CDS: -0.10 Total: -1.61 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: -1.01 Total: -4.92 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.22 Total: -5.79 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -13.43 -9.27 -22.70 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12622750.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.962 kcal (2) G-P(sol) polarization free energy of solvation -13.432 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.530 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.266 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.698 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds