Wall clock time and date at job start Sun Mar 7 2021 22:00:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35885 * 116.99872 * 2 1 4 4 C 1.38825 * 119.93946 * 180.02562 * 3 2 1 5 5 C 1.37918 * 120.06417 * 180.02562 * 4 3 2 6 6 C 1.39348 * 119.94193 * 359.97438 * 5 4 3 7 7 C 1.48409 * 120.06916 * 179.97438 * 6 5 4 8 8 N 1.31620 * 126.03502 * 317.17862 * 7 6 5 9 9 N 1.40074 * 108.10543 * 180.02562 * 8 7 6 10 10 C 1.46503 * 125.92739 * 180.02562 * 9 8 7 11 11 C 1.50697 * 109.47094 * 305.02572 * 10 9 8 12 12 O 1.21278 * 120.00235 * 359.97438 * 11 10 9 13 13 N 1.34778 * 120.00057 * 180.02562 * 11 10 9 14 14 C 1.46498 * 120.00008 * 179.97438 * 13 11 10 15 15 H 1.08992 * 112.85054 * 23.80427 * 14 13 11 16 16 C 1.53784 * 113.61046 * 155.00318 * 14 13 11 17 17 C 1.53781 * 87.08532 * 89.20039 * 16 14 13 18 18 H 1.08993 * 113.61291 * 140.05831 * 17 16 14 19 19 O 1.42894 * 113.61396 * 270.88302 * 17 16 14 20 20 C 1.53784 * 87.08052 * 25.42884 * 17 16 14 21 21 C 1.35028 * 108.14216 * 0.26418 * 9 8 7 22 22 C 1.35089 * 107.98153 * 359.57294 * 21 9 8 23 23 C 1.50700 * 126.07922 * 180.12550 * 22 21 9 24 24 O 1.42905 * 109.46805 * 105.23492 * 23 22 21 25 25 Si 1.86298 * 109.47078 * 345.23392 * 23 22 21 26 26 C 1.39357 * 119.86920 * 0.25701 * 6 5 4 27 27 C 1.37929 * 119.93488 * 359.51284 * 26 6 5 28 28 H 1.09004 * 109.47099 * 299.99397 * 1 2 3 29 29 H 1.08995 * 109.47034 * 59.99763 * 1 2 3 30 30 H 1.09003 * 109.46647 * 180.02562 * 1 2 3 31 31 H 1.08005 * 119.96223 * 359.97438 * 4 3 2 32 32 H 1.08003 * 120.03057 * 180.02562 * 5 4 3 33 33 H 1.08997 * 109.46832 * 185.02834 * 10 9 8 34 34 H 1.09000 * 109.47018 * 65.02803 * 10 9 8 35 35 H 0.97006 * 119.99668 * 359.97438 * 13 11 10 36 36 H 1.08998 * 113.61636 * 334.64380 * 16 14 13 37 37 H 1.09010 * 113.68425 * 203.76310 * 16 14 13 38 38 H 0.96702 * 114.00538 * 179.97438 * 19 17 16 39 39 H 1.09001 * 113.61184 * 89.11600 * 20 17 16 40 40 H 1.08996 * 113.61901 * 220.02410 * 20 17 16 41 41 H 1.08003 * 126.01290 * 179.73953 * 21 9 8 42 42 H 1.09003 * 109.47273 * 225.22896 * 23 22 21 43 43 H 0.96698 * 113.99798 * 299.99862 * 24 23 22 44 44 H 1.48498 * 109.99792 * 180.02562 * 25 23 22 45 45 H 1.48502 * 109.99942 * 301.31676 * 25 23 22 46 46 H 1.08003 * 120.03366 * 179.72114 * 26 6 5 47 47 H 1.07996 * 119.96661 * 180.23141 * 27 26 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4323 1.2820 -0.0005 5 6 4.0611 2.5095 0.0000 6 6 3.3035 3.6790 0.0005 7 6 3.9771 5.0014 0.0017 8 7 5.0240 5.3364 0.7257 9 7 5.3469 6.6679 0.4341 10 6 6.4486 7.4339 1.0221 11 6 6.3340 7.4061 2.5245 12 8 5.4217 6.8061 3.0521 13 7 7.2449 8.0490 3.2818 14 6 7.1332 8.0225 4.7422 15 1 6.5707 7.1636 5.1082 16 6 8.4731 8.2354 5.4664 17 6 8.1693 9.7422 5.4194 18 1 8.4444 10.2717 6.3315 19 8 8.6491 10.3863 4.2376 20 6 6.6812 9.3601 5.3517 21 6 4.4632 7.1245 -0.4791 22 6 3.6088 6.1197 -0.7714 23 6 2.4612 6.1859 -1.7458 24 8 2.8068 5.4769 -2.9375 25 14 2.1032 7.9657 -2.1638 26 6 1.9119 3.6045 0.0060 27 6 1.2885 2.3741 0.0006 28 1 -0.3633 0.5138 0.8901 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 4.0190 0.3752 -0.0005 32 1 5.1397 2.5643 -0.0008 33 1 6.4008 8.4654 0.6731 34 1 7.3989 6.9923 0.7219 35 1 7.9745 8.5293 2.8597 36 1 9.3407 7.9462 4.8734 37 1 8.4950 7.8256 6.4763 38 1 8.4607 11.3341 4.2020 39 1 6.2118 9.2576 6.3301 40 1 6.1022 9.9788 4.6661 41 1 4.4445 8.1175 -0.9034 42 1 1.5770 5.7330 -1.2972 43 1 3.5864 5.8260 -3.3907 44 1 0.9728 8.0445 -3.1236 45 1 1.7735 8.7211 -0.9285 46 1 1.3221 4.5093 0.0109 47 1 0.2101 2.3158 0.0010 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_12622750.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:35 Heat of formation + Delta-G solvation = -8.604834 kcal Electronic energy + Delta-G solvation = -31825.759528 eV Core-core repulsion = 27364.761717 eV Total energy + Delta-G solvation = -4460.997811 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.49144 -41.32550 -41.00401 -39.62771 -38.46487 -37.61973 -36.03771 -34.67999 -33.83724 -32.36869 -31.96232 -31.12966 -29.00113 -28.00722 -26.79224 -26.16413 -25.22978 -23.79412 -23.67094 -22.04318 -21.52328 -21.00676 -20.61560 -19.22452 -18.86933 -18.52884 -17.90017 -17.36867 -17.22540 -17.05562 -16.71318 -16.52109 -16.37877 -16.24220 -15.98477 -15.59861 -15.45458 -15.28279 -14.99172 -14.87369 -14.65264 -14.46282 -14.24862 -13.98218 -13.86518 -13.61865 -13.57897 -13.25880 -13.07945 -12.83166 -12.69730 -12.43057 -12.33262 -12.19760 -12.14785 -11.80073 -11.67725 -11.47775 -11.23239 -10.71071 -10.47552 -10.22078 -10.11605 -10.08536 -9.64489 -8.99729 -5.00990 0.06581 0.27707 0.81831 1.30582 1.41588 1.44863 1.62490 1.75780 2.03387 2.07070 2.28971 2.72619 3.10272 3.35508 3.47365 3.54789 3.62294 3.70946 3.74711 3.80427 3.83340 3.84176 3.97628 4.12756 4.14164 4.17618 4.20250 4.28750 4.33789 4.38802 4.48138 4.55932 4.67873 4.68312 4.69244 4.75131 4.79769 4.84844 4.86456 4.95200 4.95385 5.00784 5.02700 5.20619 5.46332 5.50808 5.53263 5.63978 5.93799 6.33809 6.46626 6.61821 6.86534 6.92293 7.15659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.123 3.877 4 C -0.161 4.161 5 C -0.061 4.061 6 C -0.058 4.058 7 C 0.114 3.886 8 N -0.295 5.295 9 N -0.360 5.360 10 C 0.113 3.887 11 C 0.494 3.506 12 O -0.570 6.570 13 N -0.690 5.690 14 C 0.111 3.889 15 H 0.072 0.928 16 C -0.137 4.137 17 C 0.088 3.912 18 H 0.087 0.913 19 O -0.564 6.564 20 C -0.181 4.181 21 C 0.079 3.921 22 C -0.270 4.270 23 C -0.042 4.042 24 O -0.557 6.557 25 Si 0.800 3.200 26 C -0.062 4.062 27 C -0.207 4.207 28 H 0.064 0.936 29 H 0.065 0.935 30 H 0.119 0.881 31 H 0.143 0.857 32 H 0.132 0.868 33 H 0.180 0.820 34 H 0.142 0.858 35 H 0.421 0.579 36 H 0.082 0.918 37 H 0.120 0.880 38 H 0.401 0.599 39 H 0.102 0.898 40 H 0.070 0.930 41 H 0.228 0.772 42 H 0.093 0.907 43 H 0.392 0.608 44 H -0.299 1.299 45 H -0.286 1.286 46 H 0.132 0.868 47 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.842 9.094 -1.150 10.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.077 3.923 4 C -0.180 4.180 5 C -0.080 4.080 6 C -0.061 4.061 7 C -0.051 4.051 8 N -0.117 5.117 9 N -0.141 5.141 10 C -0.011 4.011 11 C 0.280 3.720 12 O -0.447 6.447 13 N -0.344 5.344 14 C 0.005 3.995 15 H 0.091 0.909 16 C -0.175 4.175 17 C 0.029 3.971 18 H 0.105 0.895 19 O -0.372 6.372 20 C -0.220 4.220 21 C -0.066 4.066 22 C -0.281 4.281 23 C -0.152 4.152 24 O -0.364 6.364 25 Si 0.704 3.296 26 C -0.082 4.082 27 C -0.226 4.226 28 H 0.082 0.918 29 H 0.084 0.916 30 H 0.137 0.863 31 H 0.161 0.839 32 H 0.150 0.850 33 H 0.198 0.802 34 H 0.160 0.840 35 H 0.259 0.741 36 H 0.100 0.900 37 H 0.138 0.862 38 H 0.251 0.749 39 H 0.120 0.880 40 H 0.089 0.911 41 H 0.244 0.756 42 H 0.110 0.890 43 H 0.241 0.759 44 H -0.227 1.227 45 H -0.213 1.213 46 H 0.150 0.850 47 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 4.398 7.896 0.205 9.040 hybrid contribution -1.015 0.243 0.156 1.055 sum 3.383 8.139 0.361 8.822 Atomic orbital electron populations 1.23362 0.76403 1.05679 1.02285 1.86054 1.23504 1.26687 1.88421 1.19268 0.92587 0.84704 0.95750 1.20537 0.91816 0.98827 1.06776 1.21038 1.00063 0.90625 0.96249 1.17828 0.92808 0.89721 1.05694 1.20705 0.94591 0.94361 0.95483 1.77716 1.17633 0.94338 1.21982 1.48123 1.24954 1.08671 1.32393 1.21962 0.90026 1.00053 0.89066 1.21213 0.81902 0.78282 0.90648 1.90810 1.34979 1.43933 1.75011 1.45488 1.29719 1.53319 1.05870 1.21827 0.98697 0.98540 0.80424 0.90939 1.23472 0.96590 0.95000 1.02434 1.22691 0.92025 0.93723 0.88667 0.89517 1.86301 1.81252 1.28369 1.41306 1.24119 0.98551 0.97105 1.02215 1.22888 0.89999 1.00794 0.92906 1.20638 1.05249 0.93901 1.08348 1.24717 0.95422 1.10103 0.84961 1.86478 1.52133 1.60363 1.37475 0.94063 0.84853 0.72436 0.78209 1.21021 0.93081 0.97762 0.96302 1.21352 1.01216 0.91454 1.08553 0.91772 0.91602 0.86283 0.83926 0.85007 0.80239 0.84014 0.74051 0.89980 0.86193 0.74855 0.87956 0.91147 0.75581 0.88971 0.75897 1.22696 1.21349 0.85049 0.83078 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 113.37 1.11 1.12 16 2 O -0.33 -2.87 10.49 -92.26 -0.97 -3.84 16 3 C 0.12 1.25 6.69 22.55 0.15 1.40 16 4 C -0.16 -1.68 9.97 22.33 0.22 -1.46 16 5 C -0.06 -0.70 9.77 22.46 0.22 -0.48 16 6 C -0.06 -0.73 5.74 -20.03 -0.11 -0.84 16 7 C 0.11 1.33 6.66 42.53 0.28 1.62 16 8 N -0.30 -3.82 11.67 -48.16 -0.56 -4.38 16 9 N -0.36 -1.28 3.40 -351.92 -1.20 -2.47 16 10 C 0.11 -0.56 6.99 85.63 0.60 0.04 16 11 C 0.49 1.78 7.86 87.66 0.69 2.47 16 12 O -0.57 -9.13 15.30 -3.02 -0.05 -9.17 16 13 N -0.69 1.09 5.15 -440.04 -2.27 -1.18 16 14 C 0.11 0.05 4.32 45.52 0.20 0.24 16 15 H 0.07 0.48 7.46 -2.39 -0.02 0.47 16 16 C -0.14 0.58 7.66 31.12 0.24 0.82 16 17 C 0.09 -0.55 5.28 31.12 0.16 -0.38 16 18 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 19 O -0.56 4.07 12.32 -148.98 -1.84 2.24 16 20 C -0.18 0.54 7.71 31.12 0.24 0.78 16 21 C 0.08 -0.07 9.96 83.48 0.83 0.76 16 22 C -0.27 -1.30 5.35 -19.95 -0.11 -1.41 16 23 C -0.04 -0.11 2.52 71.24 0.18 0.07 16 24 O -0.56 -1.87 12.88 -148.98 -1.92 -3.79 16 25 Si 0.80 -2.20 30.74 68.60 2.11 -0.09 16 26 C -0.06 -0.63 8.87 22.47 0.20 -0.43 16 27 C -0.21 -1.71 9.02 22.34 0.20 -1.51 16 28 H 0.06 -0.07 7.65 -2.38 -0.02 -0.09 16 29 H 0.07 -0.08 7.66 -2.39 -0.02 -0.10 16 30 H 0.12 -0.41 8.14 -2.39 -0.02 -0.43 16 31 H 0.14 1.05 8.06 -2.91 -0.02 1.03 16 32 H 0.13 1.33 8.06 -2.91 -0.02 1.31 16 33 H 0.18 -2.81 8.07 -2.39 -0.02 -2.83 16 34 H 0.14 -1.34 8.14 -2.39 -0.02 -1.36 16 35 H 0.42 -2.87 7.60 -92.70 -0.70 -3.57 16 36 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 37 H 0.12 -0.77 8.14 -2.38 -0.02 -0.79 16 38 H 0.40 -5.67 9.12 -74.06 -0.68 -6.34 16 39 H 0.10 -0.39 8.14 -2.39 -0.02 -0.41 16 40 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 41 H 0.23 -2.77 6.40 -2.91 -0.02 -2.79 16 42 H 0.09 0.50 5.56 -2.39 -0.01 0.48 16 43 H 0.39 -2.14 8.70 -74.06 -0.64 -2.78 16 44 H -0.30 -1.43 7.11 99.48 0.71 -0.73 16 45 H -0.29 -0.66 7.11 99.48 0.71 0.05 16 46 H 0.13 0.99 6.23 -2.91 -0.02 0.98 16 47 H 0.15 0.44 6.28 -2.91 -0.02 0.42 16 Total: 0.00 -36.27 394.18 -2.32 -38.58 By element: Atomic # 1 Polarization: -17.77 SS G_CDS: -0.94 Total: -18.70 kcal Atomic # 6 Polarization: -2.49 SS G_CDS: 5.30 Total: 2.81 kcal Atomic # 7 Polarization: -4.01 SS G_CDS: -4.03 Total: -8.03 kcal Atomic # 8 Polarization: -9.80 SS G_CDS: -4.77 Total: -14.57 kcal Atomic # 14 Polarization: -2.20 SS G_CDS: 2.11 Total: -0.09 kcal Total: -36.27 -2.32 -38.58 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12622750.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.980 kcal (2) G-P(sol) polarization free energy of solvation -36.267 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.287 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.318 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.584 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.605 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds