Wall clock time and date at job start Sun Mar 7 2021 22:00:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86302 * 109.47284 * 2 1 4 4 C 1.50700 * 109.46739 * 119.99826 * 2 1 3 5 5 C 1.34837 * 125.65284 * 65.00339 * 4 2 1 6 6 C 1.40807 * 107.04883 * 180.02562 * 5 4 2 7 7 C 1.36102 * 106.73060 * 359.97438 * 6 5 4 8 8 C 1.47567 * 125.94068 * 179.97438 * 7 6 5 9 9 C 1.39919 * 119.95783 * 0.02562 * 8 7 6 10 10 C 1.36425 * 120.28057 * 179.97438 * 9 8 7 11 11 C 1.39878 * 120.18589 * 0.02562 * 10 9 8 12 12 C 1.47301 * 120.04484 * 180.02562 * 11 10 9 13 13 O 1.21623 * 119.99668 * 179.97438 * 12 11 10 14 14 N 1.34776 * 119.99894 * 359.97438 * 12 11 10 15 15 C 1.46501 * 119.99615 * 179.97438 * 14 12 11 16 16 H 1.08995 * 112.85522 * 336.19843 * 15 14 12 17 17 C 1.53783 * 113.61194 * 107.50427 * 15 14 12 18 18 C 1.53788 * 87.08146 * 89.11504 * 17 15 14 19 19 H 1.08993 * 113.61445 * 139.97982 * 18 17 15 20 20 O 1.42899 * 113.69114 * 270.87319 * 18 17 15 21 21 C 1.53777 * 87.07850 * 25.43205 * 18 17 15 22 22 C 1.40404 * 119.90727 * 0.02562 * 11 10 9 23 23 O 1.35676 * 120.13265 * 179.97438 * 22 11 10 24 24 C 1.38269 * 119.72637 * 359.97438 * 22 11 10 25 25 O 1.34239 * 125.65356 * 245.28613 * 4 2 1 26 26 H 0.96698 * 113.99879 * 300.00584 * 1 2 3 27 27 H 1.08996 * 109.46794 * 239.99619 * 2 1 3 28 28 H 1.48494 * 109.99721 * 178.68042 * 3 2 1 29 29 H 1.48501 * 109.99576 * 299.99915 * 3 2 1 30 30 H 1.07995 * 126.47649 * 0.03556 * 5 4 2 31 31 H 1.07995 * 126.63153 * 179.97438 * 6 5 4 32 32 H 1.08000 * 119.85960 * 0.02562 * 9 8 7 33 33 H 1.08001 * 119.90650 * 179.74296 * 10 9 8 34 34 H 0.96996 * 120.00191 * 0.02562 * 14 12 11 35 35 H 1.08998 * 113.61925 * 203.66269 * 17 15 14 36 36 H 1.09000 * 113.61649 * 334.57074 * 17 15 14 37 37 H 0.96694 * 114.00085 * 277.53839 * 20 18 17 38 38 H 1.09000 * 113.61805 * 220.01863 * 21 18 17 39 39 H 1.09007 * 113.69273 * 89.12817 * 21 18 17 40 40 H 0.96707 * 114.00004 * 269.99323 * 23 22 11 41 41 H 1.07998 * 120.09942 * 180.02562 * 24 22 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7567 -2.0180 1.5094 6 6 2.3799 -2.2627 2.7481 7 6 2.9072 -1.0783 3.1621 8 6 3.6554 -0.8538 4.4141 9 6 3.8755 -1.9169 5.2968 10 6 4.5667 -1.7169 6.4558 11 6 5.0601 -0.4463 6.7701 12 6 5.8065 -0.2339 8.0221 13 8 6.2355 0.8711 8.2944 14 7 6.0141 -1.2641 8.8660 15 6 6.7569 -1.0530 10.1109 16 1 7.4234 -0.1918 10.0653 17 6 5.8726 -1.0840 11.3687 18 6 6.1249 -2.6004 11.4129 19 1 6.2807 -2.9879 12.4196 20 8 5.1745 -3.3625 10.6659 21 6 7.4311 -2.3259 10.6494 22 6 4.8428 0.6264 5.8906 23 8 5.3188 1.8608 6.1912 24 6 4.1417 0.4194 4.7169 25 8 2.6220 -0.1451 2.2332 26 1 -0.3933 0.4418 0.7650 27 1 1.7923 -0.5139 -0.8899 28 1 3.5346 1.7702 0.0321 29 1 1.5616 2.4678 -1.2085 30 1 1.2372 -2.7410 0.8981 31 1 2.4298 -3.2075 3.2688 32 1 3.4973 -2.9002 5.0591 33 1 4.7296 -2.5408 7.1347 34 1 5.6722 -2.1455 8.6487 35 1 6.2986 -0.5457 12.2153 36 1 4.8325 -0.8198 11.1778 37 1 4.3508 -3.5383 11.1408 38 1 7.6494 -3.0642 9.8777 39 1 8.2842 -2.1271 11.2982 40 1 4.7017 2.4082 6.6959 41 1 3.9715 1.2401 4.0359 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12807986.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:40 Heat of formation + Delta-G solvation = -73.400744 kcal Electronic energy + Delta-G solvation = -27608.330332 eV Core-core repulsion = 23423.305247 eV Total energy + Delta-G solvation = -4185.025085 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.118 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -43.73861 -41.67423 -40.63861 -39.03241 -38.10059 -37.78811 -36.09208 -34.41210 -34.05504 -32.94129 -31.28505 -30.44275 -27.22702 -26.87397 -25.60993 -24.24678 -24.03707 -22.47772 -21.99606 -21.36013 -20.63452 -19.69213 -19.02957 -18.52829 -18.12356 -17.71029 -17.42630 -17.19567 -16.60170 -16.53564 -16.36225 -15.87680 -15.81522 -15.76582 -15.39070 -15.07735 -14.75623 -14.35237 -14.22343 -14.02288 -13.88896 -13.74622 -13.69735 -13.56914 -13.41056 -12.87258 -12.74542 -12.72079 -12.40455 -12.11752 -11.79974 -11.55624 -11.12476 -10.85449 -10.73555 -10.71318 -10.58537 -10.00577 -9.93240 -9.01073 -5.07523 -0.76797 0.13234 0.66541 1.10540 1.40214 1.46352 1.75017 1.90565 2.00586 2.08114 2.66008 2.91646 3.02966 3.21218 3.36096 3.38885 3.55335 3.60433 3.73436 3.77985 3.85160 3.92292 3.95140 4.02058 4.18644 4.26317 4.38738 4.56644 4.56716 4.61885 4.67438 4.73042 4.75699 4.80899 4.84896 4.89606 4.94168 5.02422 5.10532 5.19914 5.37987 5.47838 5.59306 5.95920 6.35120 6.46712 6.60031 6.70811 7.29219 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.028 4.028 3 Si 0.700 3.300 4 C -0.046 4.046 5 C -0.174 4.174 6 C -0.178 4.178 7 C 0.024 3.976 8 C 0.029 3.971 9 C -0.116 4.116 10 C -0.063 4.063 11 C -0.164 4.164 12 C 0.559 3.441 13 O -0.520 6.520 14 N -0.704 5.704 15 C 0.126 3.874 16 H 0.105 0.895 17 C -0.185 4.185 18 C 0.077 3.923 19 H 0.072 0.928 20 O -0.555 6.555 21 C -0.143 4.143 22 C 0.178 3.822 23 O -0.474 6.474 24 C -0.141 4.141 25 O -0.161 6.161 26 H 0.384 0.616 27 H 0.134 0.866 28 H -0.252 1.252 29 H -0.246 1.246 30 H 0.155 0.845 31 H 0.156 0.844 32 H 0.139 0.861 33 H 0.138 0.862 34 H 0.406 0.594 35 H 0.100 0.900 36 H 0.077 0.923 37 H 0.385 0.615 38 H 0.083 0.917 39 H 0.110 0.890 40 H 0.399 0.601 41 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.269 -3.052 4.029 6.020 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.138 4.138 3 Si 0.600 3.400 4 C -0.096 4.096 5 C -0.193 4.193 6 C -0.197 4.197 7 C -0.026 4.026 8 C 0.029 3.971 9 C -0.134 4.134 10 C -0.082 4.082 11 C -0.168 4.168 12 C 0.347 3.653 13 O -0.397 6.397 14 N -0.357 5.357 15 C 0.020 3.980 16 H 0.123 0.877 17 C -0.224 4.224 18 C 0.018 3.982 19 H 0.090 0.910 20 O -0.361 6.361 21 C -0.181 4.181 22 C 0.132 3.868 23 O -0.285 6.285 24 C -0.160 4.160 25 O -0.059 6.059 26 H 0.232 0.768 27 H 0.151 0.849 28 H -0.176 1.176 29 H -0.170 1.170 30 H 0.173 0.827 31 H 0.174 0.826 32 H 0.156 0.844 33 H 0.155 0.845 34 H 0.243 0.757 35 H 0.118 0.882 36 H 0.096 0.904 37 H 0.234 0.766 38 H 0.102 0.898 39 H 0.129 0.871 40 H 0.257 0.743 41 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -1.328 -1.806 2.518 3.371 hybrid contribution -0.986 -1.250 0.499 1.669 sum -2.314 -3.056 3.018 4.878 Atomic orbital electron populations 1.86566 1.16107 1.81731 1.49159 1.24420 0.85227 1.11287 0.92896 0.94260 0.81726 0.76845 0.87201 1.22993 1.00647 0.93887 0.92085 1.21582 1.03991 0.95708 0.97993 1.21912 1.01954 0.98426 0.97396 1.20324 1.03674 0.87479 0.91077 1.17755 0.95722 0.93705 0.89933 1.20705 1.00261 0.98664 0.93791 1.20864 0.95159 0.95626 0.96515 1.20491 1.04712 0.95105 0.96494 1.17997 0.79761 0.84612 0.82970 1.90836 1.49783 1.23625 1.75440 1.45588 1.56998 1.12607 1.20555 1.21748 0.93862 0.99058 0.83336 0.87693 1.24142 1.01841 0.97425 0.98970 1.22795 0.90259 0.90482 0.94693 0.90996 1.86341 1.30046 1.74365 1.45366 1.23464 0.96387 0.97506 1.00712 1.18276 0.91407 0.85739 0.91426 1.84778 1.44614 1.22727 1.76411 1.21581 0.98815 0.97530 0.98059 1.83936 1.57784 1.37728 1.26410 0.76817 0.84901 1.17644 1.16982 0.82716 0.82616 0.84360 0.84452 0.75661 0.88185 0.90422 0.76641 0.89840 0.87138 0.74283 0.83805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.28 12.88 -35.23 -0.45 -0.18 16 2 C -0.03 0.01 2.98 36.01 0.11 0.12 16 3 Si 0.70 -0.54 32.11 -169.99 -5.46 -6.00 16 4 C -0.05 -0.03 6.20 -35.51 -0.22 -0.25 16 5 C -0.17 -0.12 10.78 -39.82 -0.43 -0.54 16 6 C -0.18 -0.05 10.26 -39.38 -0.40 -0.46 16 7 C 0.02 0.03 7.02 -36.55 -0.26 -0.23 16 8 C 0.03 0.02 5.87 -104.95 -0.62 -0.59 16 9 C -0.12 0.10 9.48 -39.61 -0.38 -0.28 16 10 C -0.06 0.04 9.47 -39.62 -0.38 -0.33 16 11 C -0.16 -0.29 5.89 -104.78 -0.62 -0.91 16 12 C 0.56 1.82 7.75 -12.58 -0.10 1.72 16 13 O -0.52 -3.44 14.74 -16.70 -0.25 -3.68 16 14 N -0.70 -0.53 5.10 -54.13 -0.28 -0.80 16 15 C 0.13 0.03 4.32 -67.12 -0.29 -0.26 16 16 H 0.11 0.18 7.46 -51.93 -0.39 -0.20 16 17 C -0.18 0.24 7.71 -25.91 -0.20 0.04 16 18 C 0.08 -0.17 5.27 -25.92 -0.14 -0.30 16 19 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 20 O -0.55 1.18 12.32 -35.23 -0.43 0.74 16 21 C -0.14 0.23 7.66 -25.92 -0.20 0.03 16 22 C 0.18 0.40 6.71 -38.76 -0.26 0.14 16 23 O -0.47 -1.36 11.56 -40.69 -0.47 -1.83 16 24 C -0.14 -0.17 9.65 -39.06 -0.38 -0.55 16 25 O -0.16 -0.24 8.79 4.71 0.04 -0.20 16 26 H 0.38 -1.64 8.70 45.56 0.40 -1.24 16 27 H 0.13 -0.13 7.96 -51.93 -0.41 -0.54 16 28 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 29 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 30 H 0.16 -0.08 8.06 -52.49 -0.42 -0.50 16 31 H 0.16 -0.31 7.24 -52.49 -0.38 -0.69 16 32 H 0.14 -0.44 6.95 -52.49 -0.36 -0.80 16 33 H 0.14 -0.42 6.38 -52.49 -0.33 -0.75 16 34 H 0.41 -0.33 5.60 -40.82 -0.23 -0.56 16 35 H 0.10 -0.22 8.14 -51.93 -0.42 -0.65 16 36 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 37 H 0.39 -2.13 9.12 45.56 0.42 -1.72 16 38 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 39 H 0.11 -0.34 8.14 -51.92 -0.42 -0.76 16 40 H 0.40 -0.42 9.06 45.56 0.41 -0.01 16 41 H 0.14 0.06 7.90 -52.49 -0.41 -0.36 16 LS Contribution 353.89 15.07 5.33 5.33 Total: 0.00 -10.11 353.89 -9.74 -19.86 By element: Atomic # 1 Polarization: -7.55 SS G_CDS: -3.03 Total: -10.59 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -4.75 Total: -2.65 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -0.28 Total: -0.80 kcal Atomic # 8 Polarization: -3.58 SS G_CDS: -1.56 Total: -5.15 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: -5.46 Total: -6.00 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -10.11 -9.74 -19.86 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12807986.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.544 kcal (2) G-P(sol) polarization free energy of solvation -10.113 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.657 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.744 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.857 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.401 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds