Wall clock time and date at job start Sun Mar 7 2021 22:00:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.39282 * 121.03274 * 2 1 4 4 C 1.46490 * 134.20417 * 0.02562 * 3 2 1 5 5 C 1.50710 * 126.59711 * 359.95744 * 4 3 2 6 6 O 1.42891 * 109.47067 * 74.99987 * 5 4 3 7 7 Si 1.86298 * 109.46963 * 195.00021 * 5 4 3 8 8 C 1.34181 * 106.80779 * 180.02562 * 4 3 2 9 9 N 1.36954 * 109.94716 * 0.02562 * 8 4 3 10 10 C 1.37158 * 110.11162 * 0.02562 * 9 8 4 11 11 N 1.32824 * 132.95667 * 179.97438 * 10 9 8 12 12 C 1.31307 * 121.88411 * 179.70644 * 11 10 9 13 13 C 1.39759 * 121.02977 * 180.02562 * 2 1 3 14 14 C 1.47665 * 120.45155 * 359.96312 * 13 2 1 15 15 O 1.21577 * 120.00118 * 354.16900 * 14 13 2 16 16 N 1.34775 * 119.99987 * 174.45222 * 14 13 2 17 17 C 1.46500 * 120.00254 * 179.97438 * 16 14 13 18 18 H 1.09002 * 112.84280 * 23.80270 * 17 16 14 19 19 C 1.53780 * 113.61417 * 154.99315 * 17 16 14 20 20 C 1.53782 * 87.07865 * 139.98108 * 19 17 16 21 21 H 1.09002 * 113.61444 * 89.11583 * 20 19 17 22 22 O 1.42897 * 113.61619 * 220.02005 * 20 19 17 23 23 C 1.53777 * 113.61248 * 252.49575 * 17 16 14 24 24 H 1.08998 * 109.47276 * 263.84031 * 1 2 3 25 25 H 1.08997 * 109.46990 * 23.84157 * 1 2 3 26 26 H 1.09001 * 109.46850 * 143.83986 * 1 2 3 27 27 H 1.09000 * 109.46973 * 314.99846 * 5 4 3 28 28 H 0.96698 * 114.00049 * 60.00086 * 6 5 4 29 29 H 1.48500 * 110.00317 * 58.68009 * 7 5 4 30 30 H 1.48506 * 110.00026 * 179.97438 * 7 5 4 31 31 H 1.08000 * 125.02590 * 179.97438 * 8 4 3 32 32 H 0.96997 * 124.93687 * 179.97438 * 9 8 4 33 33 H 1.08000 * 119.31299 * 180.31125 * 12 11 10 34 34 H 0.97007 * 119.99557 * 359.97438 * 16 14 13 35 35 H 1.08989 * 113.61771 * 254.53194 * 19 17 16 36 36 H 1.09004 * 113.61602 * 25.35533 * 19 17 16 37 37 H 0.96703 * 113.99823 * 180.02562 * 22 20 19 38 38 H 1.08996 * 113.61721 * 334.56554 * 23 17 16 39 39 H 1.08999 * 113.61247 * 105.47499 * 23 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8517 2.6100 0.0005 5 6 0.4528 3.1705 0.0002 6 8 -0.1195 3.0235 1.3013 7 14 0.5075 4.9766 -0.4536 8 6 2.9949 3.3125 -0.0004 9 7 4.0670 2.4603 -0.0019 10 6 3.6348 1.1586 -0.0027 11 7 4.2721 -0.0067 -0.0046 12 6 3.6266 -1.1502 0.0007 13 6 2.2274 -1.1976 -0.0005 14 6 1.5224 -2.4951 -0.0003 15 8 0.3119 -2.5291 0.1073 16 7 2.2214 -3.6418 -0.1137 17 6 1.5220 -4.9291 -0.1129 18 1 0.4815 -4.8456 -0.4266 19 6 2.2935 -6.0497 -0.8297 20 6 1.8254 -6.9854 0.2973 21 1 0.8673 -7.4651 0.0969 22 8 2.8285 -7.9062 0.7306 23 6 1.7140 -5.7336 1.1836 24 1 -0.3634 -0.1103 1.0217 25 1 -0.3633 0.9400 -0.4154 26 1 -0.3633 -0.8297 -0.6064 27 1 -0.1545 2.6314 -0.7269 28 1 0.3701 3.4785 2.0000 29 1 1.1298 5.1455 -1.7913 30 1 -0.8661 5.5410 -0.4580 31 1 3.0600 4.3906 -0.0007 32 1 4.9967 2.7371 -0.0031 33 1 4.1868 -2.0736 0.0040 34 1 3.1876 -3.6148 -0.1958 35 1 1.8847 -6.3050 -1.8073 36 1 3.3721 -5.8937 -0.8496 37 1 2.5399 -8.4977 1.4391 38 1 2.6342 -5.4918 1.7153 39 1 0.8372 -5.7338 1.8312 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12890568.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:44 Heat of formation + Delta-G solvation = -8.366856 kcal Electronic energy + Delta-G solvation = -24664.266991 eV Core-core repulsion = 20961.263071 eV Total energy + Delta-G solvation = -3703.003921 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.126 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -42.84259 -41.23515 -39.86508 -38.59358 -37.73353 -36.42456 -34.97059 -34.05628 -31.91701 -30.89971 -28.82512 -26.82922 -26.62218 -25.53791 -24.36314 -23.62615 -21.76533 -21.01013 -20.64265 -19.32809 -18.80503 -18.59081 -17.62846 -17.47958 -16.97571 -16.61766 -16.43393 -16.34039 -15.92129 -15.53721 -15.46153 -15.15181 -14.71562 -14.61892 -14.13512 -13.90492 -13.82992 -13.62084 -13.56438 -13.50430 -13.19111 -13.01727 -12.64233 -12.31696 -12.25166 -12.02864 -11.75566 -11.12312 -11.02506 -10.88145 -10.41778 -10.17907 -10.04437 -9.58429 -9.12795 -5.13392 -0.22528 -0.05096 1.23344 1.37618 1.56651 1.64567 1.91568 1.94473 2.08282 2.84866 3.21670 3.26748 3.42059 3.44115 3.52678 3.59747 3.61918 3.73335 3.76896 3.79780 3.88942 4.08852 4.22143 4.28326 4.38190 4.48065 4.65477 4.66098 4.68211 4.79019 4.87263 4.91888 4.98653 5.06814 5.09500 5.20945 5.37916 5.47626 5.58181 5.78002 6.10027 6.47751 6.61347 6.63668 6.85894 7.24333 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.085 3.915 3 C -0.150 4.150 4 C -0.181 4.181 5 C -0.036 4.036 6 O -0.537 6.537 7 Si 0.686 3.314 8 C 0.069 3.931 9 N -0.570 5.570 10 C 0.308 3.692 11 N -0.504 5.504 12 C 0.181 3.819 13 C -0.235 4.235 14 C 0.573 3.427 15 O -0.529 6.529 16 N -0.716 5.716 17 C 0.126 3.874 18 H 0.121 0.879 19 C -0.138 4.138 20 C 0.079 3.921 21 H 0.088 0.912 22 O -0.558 6.558 23 C -0.183 4.183 24 H 0.088 0.912 25 H 0.067 0.933 26 H 0.096 0.904 27 H 0.116 0.884 28 H 0.378 0.622 29 H -0.255 1.255 30 H -0.253 1.253 31 H 0.186 0.814 32 H 0.426 0.574 33 H 0.162 0.838 34 H 0.400 0.600 35 H 0.083 0.917 36 H 0.096 0.904 37 H 0.381 0.619 38 H 0.094 0.906 39 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.876 2.289 1.241 3.879 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.076 3.924 3 C -0.156 4.156 4 C -0.188 4.188 5 C -0.147 4.147 6 O -0.342 6.342 7 Si 0.587 3.413 8 C -0.057 4.057 9 N -0.176 5.176 10 C 0.075 3.925 11 N -0.217 5.217 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.362 3.638 15 O -0.407 6.407 16 N -0.368 5.368 17 C 0.021 3.979 18 H 0.139 0.861 19 C -0.176 4.176 20 C 0.019 3.981 21 H 0.105 0.895 22 O -0.364 6.364 23 C -0.222 4.222 24 H 0.106 0.894 25 H 0.086 0.914 26 H 0.115 0.885 27 H 0.133 0.867 28 H 0.225 0.775 29 H -0.180 1.180 30 H -0.177 1.177 31 H 0.203 0.797 32 H 0.264 0.736 33 H 0.179 0.821 34 H 0.236 0.764 35 H 0.102 0.898 36 H 0.115 0.885 37 H 0.229 0.771 38 H 0.112 0.888 39 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 2.674 3.018 -0.062 4.033 hybrid contribution -0.057 -0.776 0.235 0.813 sum 2.617 2.242 0.173 3.450 Atomic orbital electron populations 1.21174 0.88732 1.03547 1.04404 1.19933 0.97153 0.89197 0.86070 1.19466 0.92803 0.93563 1.09811 1.20687 0.95357 0.91077 1.11728 1.24519 0.90384 1.10599 0.89230 1.86532 1.53595 1.77942 1.16122 0.95316 0.84422 0.76702 0.84874 1.21729 0.84971 0.95790 1.03201 1.41514 1.09621 1.02696 1.63721 1.18501 0.89337 0.85905 0.98800 1.66443 1.40549 0.96010 1.18694 1.22507 0.90077 0.94463 0.91726 1.20422 0.94768 0.93718 1.15303 1.17910 0.86853 0.83300 0.75780 1.90754 1.13559 1.87050 1.49325 1.45814 1.10505 1.05301 1.75176 1.22221 0.98234 0.80746 0.96662 0.86116 1.23472 1.02001 0.93815 0.98275 1.23082 0.91690 0.87952 0.95331 0.89462 1.86515 1.40174 1.51397 1.58292 1.24209 1.03520 0.96529 0.97922 0.89370 0.91413 0.88529 0.86666 0.77526 1.17968 1.17687 0.79699 0.73573 0.82086 0.76377 0.89829 0.88550 0.77076 0.88778 0.90523 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.40 8.69 36.01 0.31 -0.09 16 2 C 0.08 0.29 5.98 -103.67 -0.62 -0.33 16 3 C -0.15 -0.40 6.16 -105.13 -0.65 -1.05 16 4 C -0.18 -0.02 5.57 -102.72 -0.57 -0.60 16 5 C -0.04 0.02 2.06 36.01 0.07 0.09 16 6 O -0.54 0.02 12.88 -35.23 -0.45 -0.43 16 7 Si 0.69 -1.52 30.76 -169.99 -5.23 -6.75 16 8 C 0.07 -0.16 10.44 -16.69 -0.17 -0.33 16 9 N -0.57 0.56 6.04 -12.11 -0.07 0.49 16 10 C 0.31 0.72 8.42 -155.71 -1.31 -0.59 16 11 N -0.50 -1.40 10.37 -11.96 -0.12 -1.52 16 12 C 0.18 0.23 10.67 -17.12 -0.18 0.05 16 13 C -0.23 -0.60 5.89 -104.82 -0.62 -1.22 16 14 C 0.57 1.58 7.72 -12.41 -0.10 1.48 16 15 O -0.53 -2.95 13.09 5.30 0.07 -2.88 16 16 N -0.72 0.06 5.31 -54.02 -0.29 -0.23 16 17 C 0.13 -0.03 4.24 -67.12 -0.28 -0.32 16 18 H 0.12 0.09 7.47 -51.93 -0.39 -0.29 16 19 C -0.14 0.16 7.66 -25.92 -0.20 -0.04 16 20 C 0.08 -0.08 5.21 -25.92 -0.14 -0.22 16 21 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 22 O -0.56 -0.07 13.67 -35.23 -0.48 -0.55 16 23 C -0.18 0.12 7.71 -25.92 -0.20 -0.08 16 24 H 0.09 0.35 8.14 -51.93 -0.42 -0.08 16 25 H 0.07 0.17 5.06 -51.93 -0.26 -0.10 16 26 H 0.10 0.41 5.94 -51.93 -0.31 0.11 16 27 H 0.12 0.06 6.05 -51.93 -0.31 -0.25 16 28 H 0.38 -1.50 8.70 45.56 0.40 -1.11 16 29 H -0.26 -0.06 7.11 56.52 0.40 0.35 16 30 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 31 H 0.19 -1.17 6.35 -52.49 -0.33 -1.51 16 32 H 0.43 -1.52 8.96 -40.82 -0.37 -1.88 16 33 H 0.16 -0.35 6.43 -52.49 -0.34 -0.69 16 34 H 0.40 -0.97 6.80 -40.82 -0.28 -1.24 16 35 H 0.08 -0.13 8.14 -51.94 -0.42 -0.55 16 36 H 0.10 -0.11 8.12 -51.93 -0.42 -0.53 16 37 H 0.38 -1.42 9.12 45.56 0.42 -1.00 16 38 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 39 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 LS Contribution 322.46 15.07 4.86 4.86 Total: 0.00 -10.63 322.46 -9.88 -20.51 By element: Atomic # 1 Polarization: -6.75 SS G_CDS: -3.51 Total: -10.26 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -4.65 Total: -3.23 kcal Atomic # 7 Polarization: -0.78 SS G_CDS: -0.48 Total: -1.26 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -0.87 Total: -3.86 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.23 Total: -6.75 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -10.63 -9.88 -20.51 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12890568.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.139 kcal (2) G-P(sol) polarization free energy of solvation -10.626 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.512 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.879 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.505 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.367 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds