Wall clock time and date at job start Sun Mar 7 2021 22:00:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.39282 * 121.03274 * 2 1 4 4 C 1.46490 * 134.20417 * 0.02562 * 3 2 1 5 5 C 1.50710 * 126.59711 * 359.95744 * 4 3 2 6 6 O 1.42891 * 109.47067 * 74.99987 * 5 4 3 7 7 Si 1.86298 * 109.46963 * 195.00021 * 5 4 3 8 8 C 1.34181 * 106.80779 * 180.02562 * 4 3 2 9 9 N 1.36954 * 109.94716 * 0.02562 * 8 4 3 10 10 C 1.37158 * 110.11162 * 0.02562 * 9 8 4 11 11 N 1.32824 * 132.95667 * 179.97438 * 10 9 8 12 12 C 1.31307 * 121.88411 * 179.70644 * 11 10 9 13 13 C 1.39759 * 121.02977 * 180.02562 * 2 1 3 14 14 C 1.47665 * 120.45155 * 359.96312 * 13 2 1 15 15 O 1.21577 * 120.00118 * 354.16900 * 14 13 2 16 16 N 1.34775 * 119.99987 * 174.45222 * 14 13 2 17 17 C 1.46500 * 120.00254 * 179.97438 * 16 14 13 18 18 H 1.09002 * 112.84280 * 23.80270 * 17 16 14 19 19 C 1.53780 * 113.61417 * 154.99315 * 17 16 14 20 20 C 1.53782 * 87.07865 * 139.98108 * 19 17 16 21 21 H 1.09002 * 113.61444 * 89.11583 * 20 19 17 22 22 O 1.42897 * 113.61619 * 220.02005 * 20 19 17 23 23 C 1.53777 * 113.61248 * 252.49575 * 17 16 14 24 24 H 1.08998 * 109.47276 * 263.84031 * 1 2 3 25 25 H 1.08997 * 109.46990 * 23.84157 * 1 2 3 26 26 H 1.09001 * 109.46850 * 143.83986 * 1 2 3 27 27 H 1.09000 * 109.46973 * 314.99846 * 5 4 3 28 28 H 0.96698 * 114.00049 * 60.00086 * 6 5 4 29 29 H 1.48500 * 110.00317 * 58.68009 * 7 5 4 30 30 H 1.48506 * 110.00026 * 179.97438 * 7 5 4 31 31 H 1.08000 * 125.02590 * 179.97438 * 8 4 3 32 32 H 0.96997 * 124.93687 * 179.97438 * 9 8 4 33 33 H 1.08000 * 119.31299 * 180.31125 * 12 11 10 34 34 H 0.97007 * 119.99557 * 359.97438 * 16 14 13 35 35 H 1.08989 * 113.61771 * 254.53194 * 19 17 16 36 36 H 1.09004 * 113.61602 * 25.35533 * 19 17 16 37 37 H 0.96703 * 113.99823 * 180.02562 * 22 20 19 38 38 H 1.08996 * 113.61721 * 334.56554 * 23 17 16 39 39 H 1.08999 * 113.61247 * 105.47499 * 23 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8517 2.6100 0.0005 5 6 0.4528 3.1705 0.0002 6 8 -0.1195 3.0235 1.3013 7 14 0.5075 4.9766 -0.4536 8 6 2.9949 3.3125 -0.0004 9 7 4.0670 2.4603 -0.0019 10 6 3.6348 1.1586 -0.0027 11 7 4.2721 -0.0067 -0.0046 12 6 3.6266 -1.1502 0.0007 13 6 2.2274 -1.1976 -0.0005 14 6 1.5224 -2.4951 -0.0003 15 8 0.3119 -2.5291 0.1073 16 7 2.2214 -3.6418 -0.1137 17 6 1.5220 -4.9291 -0.1129 18 1 0.4815 -4.8456 -0.4266 19 6 2.2935 -6.0497 -0.8297 20 6 1.8254 -6.9854 0.2973 21 1 0.8673 -7.4651 0.0969 22 8 2.8285 -7.9062 0.7306 23 6 1.7140 -5.7336 1.1836 24 1 -0.3634 -0.1103 1.0217 25 1 -0.3633 0.9400 -0.4154 26 1 -0.3633 -0.8297 -0.6064 27 1 -0.1545 2.6314 -0.7269 28 1 0.3701 3.4785 2.0000 29 1 1.1298 5.1455 -1.7913 30 1 -0.8661 5.5410 -0.4580 31 1 3.0600 4.3906 -0.0007 32 1 4.9967 2.7371 -0.0031 33 1 4.1868 -2.0736 0.0040 34 1 3.1876 -3.6148 -0.1958 35 1 1.8847 -6.3050 -1.8073 36 1 3.3721 -5.8937 -0.8496 37 1 2.5399 -8.4977 1.4391 38 1 2.6342 -5.4918 1.7153 39 1 0.8372 -5.7338 1.8312 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_12890568.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:43 Heat of formation + Delta-G solvation = -14.220554 kcal Electronic energy + Delta-G solvation = -24664.520827 eV Core-core repulsion = 20961.263071 eV Total energy + Delta-G solvation = -3703.257756 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.126 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.87242 -41.32067 -39.89303 -38.67661 -37.70105 -36.44812 -35.08316 -34.15801 -31.91945 -30.95848 -28.98733 -26.77708 -26.60288 -25.57323 -24.40780 -23.69128 -21.89380 -20.98989 -20.61317 -19.37523 -18.81095 -18.60791 -17.63384 -17.48610 -17.02139 -16.67239 -16.50798 -16.32586 -15.98256 -15.55532 -15.46271 -15.20127 -14.74818 -14.66255 -14.18446 -14.00297 -13.83949 -13.75697 -13.62153 -13.49278 -13.29624 -13.13171 -12.65697 -12.32360 -12.27244 -12.02115 -11.70439 -11.25169 -11.16494 -10.83480 -10.53500 -10.20368 -10.15045 -9.64676 -9.12235 -4.98401 -0.38197 -0.10695 1.35158 1.42328 1.64751 1.72829 1.76478 2.01112 2.05833 2.71553 3.26996 3.32820 3.45226 3.47130 3.59821 3.60966 3.62224 3.73677 3.76072 3.81976 3.95719 4.13230 4.24814 4.28797 4.34403 4.50097 4.57409 4.67442 4.71527 4.75097 4.77017 4.93092 4.93903 4.99601 5.07097 5.19242 5.21338 5.36382 5.49454 5.71720 6.21787 6.42042 6.80509 6.86617 6.88478 7.10613 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C 0.060 3.940 3 C -0.167 4.167 4 C -0.206 4.206 5 C -0.050 4.050 6 O -0.557 6.557 7 Si 0.805 3.195 8 C 0.097 3.903 9 N -0.560 5.560 10 C 0.287 3.713 11 N -0.516 5.516 12 C 0.179 3.821 13 C -0.242 4.242 14 C 0.571 3.429 15 O -0.565 6.565 16 N -0.702 5.702 17 C 0.122 3.878 18 H 0.108 0.892 19 C -0.132 4.132 20 C 0.081 3.919 21 H 0.100 0.900 22 O -0.576 6.576 23 C -0.178 4.178 24 H 0.074 0.926 25 H 0.070 0.930 26 H 0.081 0.919 27 H 0.096 0.904 28 H 0.394 0.606 29 H -0.280 1.280 30 H -0.305 1.305 31 H 0.233 0.767 32 H 0.439 0.561 33 H 0.192 0.808 34 H 0.413 0.587 35 H 0.089 0.911 36 H 0.099 0.901 37 H 0.396 0.604 38 H 0.092 0.908 39 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.572 3.223 1.310 5.745 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.051 3.949 3 C -0.174 4.174 4 C -0.214 4.214 5 C -0.159 4.159 6 O -0.365 6.365 7 Si 0.709 3.291 8 C -0.030 4.030 9 N -0.166 5.166 10 C 0.054 3.946 11 N -0.229 5.229 12 C 0.010 3.990 13 C -0.249 4.249 14 C 0.360 3.640 15 O -0.446 6.446 16 N -0.354 5.354 17 C 0.017 3.983 18 H 0.126 0.874 19 C -0.170 4.170 20 C 0.022 3.978 21 H 0.118 0.882 22 O -0.384 6.384 23 C -0.218 4.218 24 H 0.092 0.908 25 H 0.089 0.911 26 H 0.100 0.900 27 H 0.113 0.887 28 H 0.244 0.756 29 H -0.207 1.207 30 H -0.234 1.234 31 H 0.249 0.751 32 H 0.281 0.719 33 H 0.209 0.791 34 H 0.251 0.749 35 H 0.108 0.892 36 H 0.118 0.882 37 H 0.247 0.753 38 H 0.110 0.890 39 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 4.437 3.909 0.038 5.913 hybrid contribution -0.611 -1.073 0.224 1.255 sum 3.826 2.836 0.262 4.769 Atomic orbital electron populations 1.20984 0.89431 1.03008 1.03221 1.20073 0.97004 0.90277 0.87500 1.19786 0.93337 0.94543 1.09751 1.20817 0.96421 0.90215 1.13912 1.24806 0.89841 1.12487 0.88770 1.86492 1.54426 1.78681 1.16923 0.94052 0.80623 0.72479 0.81940 1.22418 0.83598 0.97390 0.99593 1.41632 1.10748 1.01617 1.62646 1.18788 0.89482 0.86938 0.99426 1.66513 1.40842 0.96504 1.19043 1.22927 0.89665 0.95319 0.91053 1.20498 0.95466 0.93328 1.15651 1.18042 0.86493 0.84032 0.75448 1.90734 1.15044 1.87550 1.51245 1.45724 1.11089 1.04709 1.73892 1.22236 0.97866 0.80761 0.97443 0.87401 1.23450 1.01995 0.93068 0.98535 1.23127 0.92047 0.87738 0.94922 0.88213 1.86470 1.40960 1.51879 1.59130 1.24161 1.03187 0.96790 0.97621 0.90761 0.91091 0.90009 0.88710 0.75619 1.20697 1.23359 0.75132 0.71933 0.79147 0.74912 0.89231 0.88244 0.75343 0.88986 0.90935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.08 8.69 71.24 0.62 -0.46 16 2 C 0.06 0.54 5.98 -19.25 -0.12 0.42 16 3 C -0.17 -1.07 6.16 -20.20 -0.12 -1.19 16 4 C -0.21 -0.03 5.57 -18.64 -0.10 -0.13 16 5 C -0.05 0.02 2.06 71.24 0.15 0.17 16 6 O -0.56 -0.41 12.88 -148.98 -1.92 -2.33 16 7 Si 0.80 -4.27 30.76 68.60 2.11 -2.16 16 8 C 0.10 -0.62 10.44 82.97 0.87 0.24 16 9 N -0.56 1.91 6.04 -192.24 -1.16 0.75 16 10 C 0.29 1.35 8.42 134.02 1.13 2.48 16 11 N -0.52 -2.93 10.37 -191.75 -1.99 -4.91 16 12 C 0.18 0.55 10.67 85.20 0.91 1.46 16 13 C -0.24 -1.64 5.89 -19.99 -0.12 -1.76 16 14 C 0.57 4.24 7.72 86.73 0.67 4.91 16 15 O -0.57 -7.91 13.09 -3.96 -0.05 -7.97 16 16 N -0.70 -0.52 5.31 -443.08 -2.35 -2.87 16 17 C 0.12 0.04 4.24 45.52 0.19 0.23 16 18 H 0.11 0.35 7.47 -2.39 -0.02 0.34 16 19 C -0.13 0.31 7.66 31.12 0.24 0.54 16 20 C 0.08 -0.17 5.21 31.12 0.16 -0.01 16 21 H 0.10 -0.47 8.14 -2.39 -0.02 -0.49 16 22 O -0.58 0.10 13.67 -148.98 -2.04 -1.94 16 23 C -0.18 0.14 7.71 31.12 0.24 0.38 16 24 H 0.07 0.86 8.14 -2.39 -0.02 0.84 16 25 H 0.07 0.58 5.06 -2.39 -0.01 0.56 16 26 H 0.08 1.01 5.94 -2.39 -0.01 1.00 16 27 H 0.10 0.28 6.05 -2.39 -0.01 0.27 16 28 H 0.39 -3.17 8.70 -74.06 -0.64 -3.82 16 29 H -0.28 0.28 7.11 99.48 0.71 0.99 16 30 H -0.31 -1.09 7.11 99.48 0.71 -0.38 16 31 H 0.23 -3.85 6.35 -2.91 -0.02 -3.87 16 32 H 0.44 -3.99 8.96 -92.71 -0.83 -4.82 16 33 H 0.19 -0.90 6.43 -2.91 -0.02 -0.92 16 34 H 0.41 -1.96 6.80 -92.70 -0.63 -2.59 16 35 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 36 H 0.10 -0.27 8.12 -2.39 -0.02 -0.29 16 37 H 0.40 -3.09 9.12 -74.06 -0.68 -3.77 16 38 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 39 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 Total: 0.00 -27.19 322.46 -4.26 -31.45 By element: Atomic # 1 Polarization: -15.74 SS G_CDS: -1.58 Total: -17.32 kcal Atomic # 6 Polarization: 2.58 SS G_CDS: 4.71 Total: 7.29 kcal Atomic # 7 Polarization: -1.53 SS G_CDS: -5.50 Total: -7.03 kcal Atomic # 8 Polarization: -8.23 SS G_CDS: -4.01 Total: -12.23 kcal Atomic # 14 Polarization: -4.27 SS G_CDS: 2.11 Total: -2.16 kcal Total: -27.19 -4.26 -31.45 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12890568.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.230 kcal (2) G-P(sol) polarization free energy of solvation -27.187 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.451 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.221 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds