Wall clock time and date at job start Sun Mar 7 2021 22:00:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42890 * 1 3 3 Si 1.86302 * 109.47523 * 2 1 4 4 C 1.50703 * 109.47297 * 119.99846 * 2 1 3 5 5 C 1.38338 * 119.86949 * 64.99719 * 4 2 1 6 6 C 1.38005 * 120.12483 * 180.02562 * 5 4 2 7 7 C 1.39400 * 119.87410 * 359.97438 * 6 5 4 8 8 C 1.48273 * 120.13030 * 180.02562 * 7 6 5 9 9 C 1.39494 * 119.97870 * 179.97438 * 8 7 6 10 10 C 1.37671 * 120.02701 * 180.02562 * 9 8 7 11 11 C 1.39708 * 119.97266 * 0.26653 * 10 9 8 12 12 C 1.47718 * 120.02289 * 179.71953 * 11 10 9 13 13 O 1.21572 * 120.00129 * 359.97438 * 12 11 10 14 14 N 1.34777 * 119.99936 * 179.97438 * 12 11 10 15 15 C 1.46494 * 120.00122 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.84985 * 334.66737 * 15 14 12 17 17 C 1.53775 * 113.61737 * 105.86351 * 15 14 12 18 18 C 1.54048 * 86.98699 * 89.16397 * 17 15 14 19 19 H 1.08995 * 113.62629 * 139.98033 * 18 17 15 20 20 O 1.42906 * 113.69075 * 270.87718 * 18 17 15 21 21 C 1.53780 * 87.07535 * 25.43430 * 18 17 15 22 22 C 1.39708 * 119.95032 * 359.43559 * 11 10 9 23 23 C 1.37668 * 119.97348 * 0.60175 * 22 11 10 24 24 C 1.39405 * 119.74362 * 0.27722 * 7 6 5 25 25 C 1.38001 * 119.86832 * 359.48886 * 24 7 6 26 26 H 0.96698 * 114.00144 * 300.00078 * 1 2 3 27 27 H 1.09003 * 109.47360 * 239.99424 * 2 1 3 28 28 H 1.48503 * 109.99591 * 299.99795 * 3 2 1 29 29 H 1.48498 * 109.99957 * 61.31434 * 3 2 1 30 30 H 1.07996 * 119.93511 * 0.02562 * 5 4 2 31 31 H 1.08003 * 120.06077 * 179.97438 * 6 5 4 32 32 H 1.08004 * 119.99105 * 0.02562 * 9 8 7 33 33 H 1.08002 * 120.01096 * 179.97438 * 10 9 8 34 34 H 0.97000 * 119.99776 * 0.02562 * 14 12 11 35 35 H 1.09004 * 113.61985 * 203.66316 * 17 15 14 36 36 H 1.08995 * 113.61662 * 334.57144 * 17 15 14 37 37 H 0.96696 * 113.99691 * 277.52802 * 20 18 17 38 38 H 1.09009 * 113.61473 * 220.02291 * 21 18 17 39 39 H 1.08991 * 113.61631 * 89.12233 * 21 18 17 40 40 H 1.07997 * 120.01192 * 180.28338 * 22 11 10 41 41 H 1.07999 * 119.98468 * 179.67469 * 23 22 11 42 42 H 1.07994 * 120.06341 * 179.70530 * 24 7 6 43 43 H 1.08008 * 119.93311 * 180.23453 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6829 -2.0612 1.3958 6 6 2.1401 -2.7169 2.5209 7 6 2.8538 -2.0155 3.4914 8 6 3.3481 -2.7144 4.7020 9 6 4.0624 -2.0095 5.6709 10 6 4.5223 -2.6576 6.7952 11 6 4.2781 -4.0229 6.9627 12 6 4.7763 -4.7207 8.1656 13 8 5.3996 -4.1070 9.0100 14 7 4.5401 -6.0377 8.3270 15 6 5.0337 -6.7296 9.5202 16 1 5.9037 -6.2436 9.9618 17 6 3.9313 -7.0635 10.5390 18 6 3.7457 -8.3915 9.7807 19 1 3.5752 -9.2473 10.4337 20 8 2.8025 -8.3142 8.7098 21 6 5.2074 -8.2452 9.3259 22 6 3.5572 -4.7265 5.9947 23 6 3.0990 -4.0765 4.8709 24 6 3.0964 -0.6532 3.3218 25 6 2.6386 -0.0092 2.1904 26 1 -0.3933 0.4417 0.7650 27 1 1.7923 -0.5139 -0.8899 28 1 1.5615 2.4678 -1.2086 29 1 1.5879 2.4586 1.2242 30 1 1.1303 -2.6036 0.6431 31 1 1.9452 -3.7714 2.6491 32 1 4.2548 -0.9550 5.5392 33 1 5.0756 -2.1117 7.5450 34 1 4.0431 -6.5274 7.6531 35 1 4.3009 -7.1900 11.5566 36 1 3.0676 -6.4013 10.4806 37 1 1.8814 -8.4055 8.9896 38 1 5.3732 -8.5363 8.2886 39 1 5.9252 -8.6940 10.0123 40 1 3.3639 -5.7810 6.1254 41 1 2.5462 -4.6214 4.1200 42 1 3.6447 -0.1038 4.0727 43 1 2.8293 1.0454 2.0562 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_13158362.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:48 Heat of formation + Delta-G solvation = -29.065252 kcal Electronic energy + Delta-G solvation = -26004.223809 eV Core-core repulsion = 22174.721880 eV Total energy + Delta-G solvation = -3829.501930 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.135 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.59140 -40.96817 -40.03462 -38.93613 -37.63107 -36.13041 -34.38178 -33.60235 -32.57164 -31.60406 -30.77237 -27.19588 -26.87348 -25.64538 -24.70835 -24.16506 -22.63627 -22.37416 -21.33378 -20.62347 -19.37678 -18.65615 -18.18159 -17.75944 -17.21266 -16.86267 -16.52234 -16.35159 -16.05109 -15.97534 -15.73996 -15.47348 -15.28213 -15.03124 -14.95333 -14.81727 -14.33076 -14.23132 -14.07376 -13.74789 -13.65273 -13.48839 -13.15551 -12.82045 -12.70979 -12.61310 -12.39438 -12.05741 -11.95684 -11.57095 -11.55434 -10.92208 -10.79263 -10.75782 -10.60496 -10.07866 -10.01980 -10.00911 -9.09734 -4.99309 -0.68254 0.32118 0.34748 0.50848 1.24372 1.55675 1.88322 1.93259 2.09775 2.60264 2.92466 2.99627 3.31632 3.38354 3.42065 3.55749 3.59139 3.67549 3.75292 3.79036 3.86076 3.92897 3.97938 4.02560 4.21978 4.23293 4.30403 4.48440 4.56751 4.59142 4.59302 4.65658 4.73237 4.79848 4.82742 4.87614 4.90658 4.93822 5.00545 5.11736 5.16672 5.27800 5.38352 5.43556 5.58000 5.61484 5.78372 5.86404 6.35590 6.47406 6.59927 7.26728 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.686 3.314 4 C -0.112 4.112 5 C -0.090 4.090 6 C -0.105 4.105 7 C -0.047 4.047 8 C -0.018 4.018 9 C -0.119 4.119 10 C -0.054 4.054 11 C -0.136 4.136 12 C 0.560 3.440 13 O -0.537 6.537 14 N -0.702 5.702 15 C 0.125 3.875 16 H 0.104 0.896 17 C -0.185 4.185 18 C 0.077 3.923 19 H 0.072 0.928 20 O -0.555 6.555 21 C -0.142 4.142 22 C -0.080 4.080 23 C -0.118 4.118 24 C -0.101 4.101 25 C -0.116 4.116 26 H 0.376 0.624 27 H 0.119 0.881 28 H -0.257 1.257 29 H -0.260 1.260 30 H 0.129 0.871 31 H 0.129 0.871 32 H 0.135 0.865 33 H 0.140 0.860 34 H 0.407 0.593 35 H 0.100 0.900 36 H 0.077 0.923 37 H 0.385 0.615 38 H 0.083 0.917 39 H 0.111 0.889 40 H 0.130 0.870 41 H 0.133 0.867 42 H 0.132 0.868 43 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.100 -2.859 -0.059 2.861 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.186 4.186 3 Si 0.587 3.413 4 C -0.113 4.113 5 C -0.108 4.108 6 C -0.123 4.123 7 C -0.047 4.047 8 C -0.019 4.019 9 C -0.136 4.136 10 C -0.073 4.073 11 C -0.139 4.139 12 C 0.348 3.652 13 O -0.415 6.415 14 N -0.355 5.355 15 C 0.019 3.981 16 H 0.122 0.878 17 C -0.224 4.224 18 C 0.017 3.983 19 H 0.090 0.910 20 O -0.361 6.361 21 C -0.180 4.180 22 C -0.099 4.099 23 C -0.136 4.136 24 C -0.119 4.119 25 C -0.133 4.133 26 H 0.224 0.776 27 H 0.137 0.863 28 H -0.182 1.182 29 H -0.185 1.185 30 H 0.147 0.853 31 H 0.147 0.853 32 H 0.152 0.848 33 H 0.158 0.842 34 H 0.245 0.755 35 H 0.118 0.882 36 H 0.096 0.904 37 H 0.234 0.766 38 H 0.102 0.898 39 H 0.129 0.871 40 H 0.147 0.853 41 H 0.151 0.849 42 H 0.149 0.851 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.771 -1.829 -0.356 2.017 hybrid contribution -1.881 -0.598 0.631 2.072 sum -1.110 -2.427 0.275 2.683 Atomic orbital electron populations 1.86607 1.17619 1.79974 1.49330 1.25050 0.84027 1.11062 0.98465 0.94941 0.91667 0.74467 0.80203 1.20384 0.99248 0.94945 0.96684 1.20980 0.98582 0.93726 0.97530 1.21322 0.97336 1.00151 0.93483 1.18825 0.98665 0.93462 0.93792 1.18987 0.96294 0.93316 0.93268 1.21236 0.98430 1.00470 0.93501 1.21227 0.96274 0.92895 0.96913 1.19967 1.03022 0.95051 0.95820 1.18297 0.79272 0.81806 0.85872 1.90789 1.40563 1.66115 1.43997 1.45586 1.57313 1.09032 1.23539 1.21758 0.97560 0.92550 0.86234 0.87763 1.24186 1.00500 0.98394 0.99350 1.22852 0.90154 0.96523 0.88725 0.90975 1.86345 1.19560 1.95924 1.34269 1.23452 0.95357 0.95308 1.03847 1.21245 0.95785 0.99752 0.93121 1.21163 1.00707 0.93720 0.98000 1.21224 0.99452 0.93578 0.97606 1.21006 0.98533 0.99770 0.94038 0.77617 0.86312 1.18191 1.18497 0.85295 0.85276 0.84765 0.84244 0.75537 0.88170 0.90399 0.76630 0.89809 0.87103 0.85252 0.84913 0.85066 0.85255 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.54 12.83 -35.23 -0.45 -0.99 16 2 C -0.08 0.04 2.80 36.01 0.10 0.14 16 3 Si 0.69 -0.79 29.87 -169.99 -5.08 -5.87 16 4 C -0.11 0.02 5.36 -104.55 -0.56 -0.54 16 5 C -0.09 0.00 9.67 -39.63 -0.38 -0.38 16 6 C -0.11 0.02 9.43 -39.23 -0.37 -0.35 16 7 C -0.05 -0.01 5.88 -104.90 -0.62 -0.63 16 8 C -0.02 -0.01 5.88 -104.83 -0.62 -0.63 16 9 C -0.12 -0.05 9.41 -39.32 -0.37 -0.42 16 10 C -0.05 -0.09 9.58 -39.24 -0.38 -0.47 16 11 C -0.14 -0.27 5.88 -104.93 -0.62 -0.88 16 12 C 0.56 1.95 7.77 -12.39 -0.10 1.85 16 13 O -0.54 -3.72 15.95 5.30 0.08 -3.63 16 14 N -0.70 -0.74 5.09 -54.01 -0.27 -1.02 16 15 C 0.12 0.06 4.29 -67.13 -0.29 -0.23 16 16 H 0.10 0.19 7.50 -51.93 -0.39 -0.20 16 17 C -0.19 0.16 7.73 -25.78 -0.20 -0.04 16 18 C 0.08 -0.14 5.28 -25.78 -0.14 -0.28 16 19 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 20 O -0.55 0.93 12.35 -35.23 -0.44 0.50 16 21 C -0.14 0.22 7.65 -25.92 -0.20 0.02 16 22 C -0.08 0.00 9.52 -39.24 -0.37 -0.37 16 23 C -0.12 0.03 9.41 -39.32 -0.37 -0.34 16 24 C -0.10 0.04 9.43 -39.23 -0.37 -0.33 16 25 C -0.12 0.07 8.65 -39.64 -0.34 -0.27 16 26 H 0.38 -0.64 8.70 45.56 0.40 -0.25 16 27 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 28 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 29 H -0.26 -0.18 7.00 56.52 0.40 0.21 16 30 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 31 H 0.13 -0.25 6.19 -52.48 -0.33 -0.57 16 32 H 0.13 -0.22 6.19 -52.48 -0.32 -0.54 16 33 H 0.14 0.25 7.64 -52.49 -0.40 -0.15 16 34 H 0.41 -0.16 5.65 -40.82 -0.23 -0.39 16 35 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 36 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 37 H 0.39 -1.94 9.12 45.56 0.42 -1.52 16 38 H 0.08 -0.08 8.14 -51.92 -0.42 -0.51 16 39 H 0.11 -0.34 8.14 -51.93 -0.42 -0.77 16 40 H 0.13 -0.27 6.39 -52.49 -0.34 -0.60 16 41 H 0.13 -0.30 6.19 -52.49 -0.32 -0.62 16 42 H 0.13 -0.28 6.19 -52.49 -0.33 -0.61 16 43 H 0.13 -0.28 4.82 -52.48 -0.25 -0.53 16 LS Contribution 355.12 15.07 5.35 5.35 Total: 0.00 -8.53 355.12 -11.24 -19.77 By element: Atomic # 1 Polarization: -5.71 SS G_CDS: -4.25 Total: -9.96 kcal Atomic # 6 Polarization: 2.03 SS G_CDS: -6.18 Total: -4.15 kcal Atomic # 7 Polarization: -0.74 SS G_CDS: -0.27 Total: -1.02 kcal Atomic # 8 Polarization: -3.32 SS G_CDS: -0.80 Total: -4.13 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.08 Total: -5.87 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -8.53 -11.24 -19.77 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13158362.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.295 kcal (2) G-P(sol) polarization free energy of solvation -8.534 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.829 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.236 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.770 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.065 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds