Wall clock time and date at job start Sun Mar 7 2021 22:00:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86303 * 109.47219 * 2 1 4 4 C 1.50693 * 109.47579 * 239.99633 * 2 1 3 5 5 C 1.38903 * 119.67427 * 120.02448 * 4 2 1 6 6 C 1.36476 * 120.61273 * 179.97438 * 5 4 2 7 7 C 1.40057 * 119.83351 * 359.97438 * 6 5 4 8 8 C 1.41592 * 133.38352 * 180.02562 * 7 6 5 9 9 C 1.35869 * 107.72618 * 179.97438 * 8 7 6 10 10 C 1.47067 * 125.42335 * 179.97438 * 9 8 7 11 11 O 1.21641 * 119.99823 * 0.02562 * 10 9 8 12 12 N 1.34769 * 119.99973 * 180.02562 * 10 9 8 13 13 C 1.46497 * 120.00274 * 179.97438 * 12 10 9 14 14 H 1.09002 * 112.90477 * 336.24972 * 13 12 10 15 15 C 1.53779 * 113.61581 * 107.50145 * 13 12 10 16 16 C 1.53779 * 87.08402 * 139.98450 * 15 13 12 17 17 H 1.09000 * 113.61527 * 89.11480 * 16 15 13 18 18 O 1.42902 * 113.69320 * 220.01174 * 16 15 13 19 19 C 1.53784 * 113.61569 * 204.99925 * 13 12 10 20 20 N 1.38144 * 109.14821 * 0.24405 * 9 8 7 21 21 C 1.37485 * 108.78977 * 359.59925 * 20 9 8 22 22 C 1.37705 * 119.67954 * 300.00436 * 4 2 1 23 23 H 0.96701 * 114.00439 * 300.00759 * 1 2 3 24 24 H 1.09004 * 109.47031 * 119.99185 * 2 1 3 25 25 H 1.48494 * 110.00152 * 178.67811 * 3 2 1 26 26 H 1.48503 * 109.99977 * 299.99844 * 3 2 1 27 27 H 1.07995 * 119.69090 * 359.97438 * 5 4 2 28 28 H 1.08002 * 120.08349 * 179.97438 * 6 5 4 29 29 H 1.07994 * 126.13774 * 0.02562 * 8 7 6 30 30 H 0.97009 * 120.00192 * 359.97438 * 12 10 9 31 31 H 1.09006 * 113.61307 * 25.43652 * 15 13 12 32 32 H 1.08999 * 113.69146 * 254.54138 * 15 13 12 33 33 H 0.96703 * 113.99566 * 277.53373 * 18 16 15 34 34 H 1.09004 * 113.61451 * 105.47149 * 19 13 12 35 35 H 1.08994 * 113.61477 * 334.56451 * 19 13 12 36 36 H 0.97003 * 125.60427 * 179.71720 * 20 9 8 37 37 H 1.08009 * 120.09341 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2303 5 6 2.7300 -0.0291 -2.1399 6 6 3.1959 -0.6539 -3.2602 7 6 2.8680 -1.9947 -3.4975 8 6 3.1838 -2.9041 -4.5359 9 6 2.5869 -4.0891 -4.2437 10 6 2.6609 -5.3064 -5.0657 11 8 3.2976 -5.3025 -6.1022 12 7 2.0233 -6.4260 -4.6707 13 6 2.0965 -7.6384 -5.4897 14 1 2.3161 -7.4303 -6.5369 15 6 2.9808 -8.7400 -4.8820 16 6 1.9200 -9.7458 -5.3595 17 1 2.0914 -10.1138 -6.3711 18 8 1.6606 -10.7944 -4.4240 19 6 0.9065 -8.5914 -5.2874 20 7 1.8943 -3.9666 -3.0547 21 6 2.0586 -2.6882 -2.5762 22 6 1.5946 -2.0289 -1.4417 23 1 -0.3934 0.4418 0.7650 24 1 1.7923 -0.5137 0.8901 25 1 3.5345 1.7703 0.0322 26 1 1.5615 2.4679 -1.2085 27 1 2.9845 1.0047 -1.9589 28 1 3.8159 -0.1158 -3.9620 29 1 3.7910 -2.6938 -5.4038 30 1 1.5158 -6.4292 -3.8439 31 1 3.0688 -8.6803 -3.7971 32 1 3.9441 -8.8524 -5.3793 33 1 2.2948 -11.5234 -4.4645 34 1 0.1950 -8.5828 -6.1131 35 1 0.4276 -8.4911 -4.3135 36 1 1.3785 -4.6679 -2.6268 37 1 0.9737 -2.5503 -0.7281 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_13158378.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:51 Heat of formation + Delta-G solvation = -21.927416 kcal Electronic energy + Delta-G solvation = -21904.726476 eV Core-core repulsion = 18422.098056 eV Total energy + Delta-G solvation = -3482.628421 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.115 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -42.71465 -41.15431 -39.69738 -38.79193 -37.01942 -36.50087 -34.18337 -33.29886 -31.17337 -30.45168 -27.30085 -26.95484 -25.45189 -23.97939 -22.98234 -21.94151 -21.45825 -20.91738 -19.47547 -18.91939 -18.44255 -17.96632 -17.31934 -16.92697 -16.62321 -16.39934 -16.16813 -15.56257 -15.28484 -15.11464 -14.91287 -14.73406 -14.58168 -14.33135 -14.02832 -13.82475 -13.67529 -13.33960 -12.89402 -12.67208 -12.45138 -12.26518 -12.14900 -11.90768 -11.84114 -11.29491 -10.96137 -10.94753 -10.35165 -10.27442 -9.33765 -8.83432 -4.96003 -0.35671 0.48592 0.97587 1.27131 1.65610 1.73370 1.87497 1.99778 2.21902 2.72496 3.10198 3.25282 3.35652 3.44605 3.55150 3.60144 3.64151 3.77120 3.83749 3.94809 4.18272 4.26668 4.32331 4.35813 4.44474 4.52701 4.55684 4.56513 4.74218 4.79082 4.87039 4.91469 4.95160 5.21633 5.34478 5.36876 5.50862 5.58678 5.93249 6.16221 6.31723 6.54350 6.58486 6.94729 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.072 4.072 3 Si 0.685 3.315 4 C -0.044 4.044 5 C -0.152 4.152 6 C -0.049 4.049 7 C -0.118 4.118 8 C -0.098 4.098 9 C 0.012 3.988 10 C 0.588 3.412 11 O -0.517 6.517 12 N -0.717 5.717 13 C 0.125 3.875 14 H 0.124 0.876 15 C -0.183 4.183 16 C 0.080 3.920 17 H 0.089 0.911 18 O -0.558 6.558 19 C -0.137 4.137 20 N -0.577 5.577 21 C 0.118 3.882 22 C -0.100 4.100 23 H 0.383 0.617 24 H 0.075 0.925 25 H -0.254 1.254 26 H -0.250 1.250 27 H 0.121 0.879 28 H 0.132 0.868 29 H 0.159 0.841 30 H 0.398 0.602 31 H 0.093 0.907 32 H 0.078 0.922 33 H 0.383 0.617 34 H 0.085 0.915 35 H 0.095 0.905 36 H 0.418 0.582 37 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.338 -0.772 4.604 4.856 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.182 4.182 3 Si 0.586 3.414 4 C -0.046 4.046 5 C -0.170 4.170 6 C -0.067 4.067 7 C -0.122 4.122 8 C -0.125 4.125 9 C -0.097 4.097 10 C 0.374 3.626 11 O -0.391 6.391 12 N -0.367 5.367 13 C 0.020 3.980 14 H 0.142 0.858 15 C -0.222 4.222 16 C 0.021 3.979 17 H 0.107 0.893 18 O -0.364 6.364 19 C -0.175 4.175 20 N -0.182 5.182 21 C 0.007 3.993 22 C -0.120 4.120 23 H 0.230 0.770 24 H 0.093 0.907 25 H -0.179 1.179 26 H -0.174 1.174 27 H 0.138 0.862 28 H 0.150 0.850 29 H 0.177 0.823 30 H 0.232 0.768 31 H 0.112 0.888 32 H 0.097 0.903 33 H 0.230 0.770 34 H 0.104 0.896 35 H 0.114 0.886 36 H 0.256 0.744 37 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.860 -0.271 3.007 3.139 hybrid contribution 0.017 -1.307 0.361 1.356 sum -0.842 -1.578 3.368 3.814 Atomic orbital electron populations 1.86493 1.17179 1.81815 1.49741 1.24701 0.85725 1.10546 0.97239 0.95421 0.80693 0.77830 0.87441 1.19025 0.97356 0.93070 0.95157 1.20345 1.01707 0.99258 0.95721 1.20320 0.97773 0.92205 0.96423 1.18193 1.02876 0.94759 0.96395 1.20971 1.01589 0.90274 0.99620 1.20076 1.03388 0.96531 0.89694 1.17209 0.79207 0.81533 0.84631 1.90875 1.41224 1.83644 1.23391 1.45802 1.53280 1.11312 1.26336 1.22300 0.96882 0.81888 0.96941 0.85818 1.24214 0.99328 0.96081 1.02578 1.23066 0.95718 0.86365 0.92796 0.89277 1.86513 1.56528 1.33339 1.59987 1.23476 0.96900 0.93110 1.04050 1.41874 1.45084 1.11191 1.20082 1.18284 0.99898 0.84664 0.96413 1.19829 1.02071 0.94097 0.96033 0.76969 0.90675 1.17903 1.17417 0.86191 0.85002 0.82312 0.76786 0.88844 0.90307 0.76955 0.89610 0.88628 0.74418 0.85312 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.07 12.73 -35.23 -0.45 -0.38 16 2 C -0.07 0.02 2.80 36.00 0.10 0.12 16 3 Si 0.69 -0.79 29.75 -169.99 -5.06 -5.85 16 4 C -0.04 -0.10 5.43 -104.57 -0.57 -0.67 16 5 C -0.15 -0.40 8.59 -39.97 -0.34 -0.74 16 6 C -0.05 -0.12 10.06 -39.54 -0.40 -0.52 16 7 C -0.12 -0.37 6.16 -106.93 -0.66 -1.03 16 8 C -0.10 -0.29 10.53 -39.15 -0.41 -0.70 16 9 C 0.01 0.02 6.97 -82.29 -0.57 -0.55 16 10 C 0.59 1.45 7.80 -12.68 -0.10 1.35 16 11 O -0.52 -3.05 16.44 5.24 0.09 -2.97 16 12 N -0.72 0.43 5.35 -54.21 -0.29 0.14 16 13 C 0.12 -0.09 4.24 -67.12 -0.28 -0.37 16 14 H 0.12 0.04 7.47 -51.93 -0.39 -0.35 16 15 C -0.18 0.21 7.71 -25.92 -0.20 0.01 16 16 C 0.08 -0.12 5.21 -25.92 -0.14 -0.25 16 17 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 18 O -0.56 0.18 13.67 -35.23 -0.48 -0.30 16 19 C -0.14 0.22 7.66 -25.91 -0.20 0.02 16 20 N -0.58 -0.13 6.07 -7.35 -0.04 -0.17 16 21 C 0.12 0.27 7.25 -83.97 -0.61 -0.34 16 22 C -0.10 -0.20 9.61 -39.42 -0.38 -0.57 16 23 H 0.38 -1.98 8.74 45.56 0.40 -1.58 16 24 H 0.08 -0.15 7.96 -51.93 -0.41 -0.56 16 25 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 26 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 27 H 0.12 0.22 4.82 -52.49 -0.25 -0.03 16 28 H 0.13 0.05 8.06 -52.49 -0.42 -0.37 16 29 H 0.16 0.33 8.06 -52.49 -0.42 -0.09 16 30 H 0.40 -1.23 7.78 -40.82 -0.32 -1.55 16 31 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 33 H 0.38 -1.59 9.12 45.56 0.42 -1.17 16 34 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 35 H 0.10 -0.16 8.12 -51.93 -0.42 -0.58 16 36 H 0.42 -1.26 8.12 -40.82 -0.33 -1.59 16 37 H 0.13 0.05 8.06 -52.48 -0.42 -0.38 16 LS Contribution 317.13 15.07 4.78 4.78 Total: 0.00 -9.88 317.13 -9.68 -19.56 By element: Atomic # 1 Polarization: -7.09 SS G_CDS: -3.47 Total: -10.56 kcal Atomic # 6 Polarization: 0.51 SS G_CDS: -4.76 Total: -4.25 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -0.33 Total: -0.04 kcal Atomic # 8 Polarization: -2.80 SS G_CDS: -0.84 Total: -3.65 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.06 Total: -5.85 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -9.88 -9.68 -19.56 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13158378.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.370 kcal (2) G-P(sol) polarization free energy of solvation -9.875 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.682 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.557 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.927 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds