Wall clock time and date at job start Sun Mar 7 2021 22:00:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86303 * 109.47219 * 2 1 4 4 C 1.50693 * 109.47579 * 239.99633 * 2 1 3 5 5 C 1.38903 * 119.67427 * 120.02448 * 4 2 1 6 6 C 1.36476 * 120.61273 * 179.97438 * 5 4 2 7 7 C 1.40057 * 119.83351 * 359.97438 * 6 5 4 8 8 C 1.41592 * 133.38352 * 180.02562 * 7 6 5 9 9 C 1.35869 * 107.72618 * 179.97438 * 8 7 6 10 10 C 1.47067 * 125.42335 * 179.97438 * 9 8 7 11 11 O 1.21641 * 119.99823 * 0.02562 * 10 9 8 12 12 N 1.34769 * 119.99973 * 180.02562 * 10 9 8 13 13 C 1.46497 * 120.00274 * 179.97438 * 12 10 9 14 14 H 1.09002 * 112.90477 * 336.24972 * 13 12 10 15 15 C 1.53779 * 113.61581 * 107.50145 * 13 12 10 16 16 C 1.53779 * 87.08402 * 139.98450 * 15 13 12 17 17 H 1.09000 * 113.61527 * 89.11480 * 16 15 13 18 18 O 1.42902 * 113.69320 * 220.01174 * 16 15 13 19 19 C 1.53784 * 113.61569 * 204.99925 * 13 12 10 20 20 N 1.38144 * 109.14821 * 0.24405 * 9 8 7 21 21 C 1.37485 * 108.78977 * 359.59925 * 20 9 8 22 22 C 1.37705 * 119.67954 * 300.00436 * 4 2 1 23 23 H 0.96701 * 114.00439 * 300.00759 * 1 2 3 24 24 H 1.09004 * 109.47031 * 119.99185 * 2 1 3 25 25 H 1.48494 * 110.00152 * 178.67811 * 3 2 1 26 26 H 1.48503 * 109.99977 * 299.99844 * 3 2 1 27 27 H 1.07995 * 119.69090 * 359.97438 * 5 4 2 28 28 H 1.08002 * 120.08349 * 179.97438 * 6 5 4 29 29 H 1.07994 * 126.13774 * 0.02562 * 8 7 6 30 30 H 0.97009 * 120.00192 * 359.97438 * 12 10 9 31 31 H 1.09006 * 113.61307 * 25.43652 * 15 13 12 32 32 H 1.08999 * 113.69146 * 254.54138 * 15 13 12 33 33 H 0.96703 * 113.99566 * 277.53373 * 18 16 15 34 34 H 1.09004 * 113.61451 * 105.47149 * 19 13 12 35 35 H 1.08994 * 113.61477 * 334.56451 * 19 13 12 36 36 H 0.97003 * 125.60427 * 179.71720 * 20 9 8 37 37 H 1.08009 * 120.09341 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2303 5 6 2.7300 -0.0291 -2.1399 6 6 3.1959 -0.6539 -3.2602 7 6 2.8680 -1.9947 -3.4975 8 6 3.1838 -2.9041 -4.5359 9 6 2.5869 -4.0891 -4.2437 10 6 2.6609 -5.3064 -5.0657 11 8 3.2976 -5.3025 -6.1022 12 7 2.0233 -6.4260 -4.6707 13 6 2.0965 -7.6384 -5.4897 14 1 2.3161 -7.4303 -6.5369 15 6 2.9808 -8.7400 -4.8820 16 6 1.9200 -9.7458 -5.3595 17 1 2.0914 -10.1138 -6.3711 18 8 1.6606 -10.7944 -4.4240 19 6 0.9065 -8.5914 -5.2874 20 7 1.8943 -3.9666 -3.0547 21 6 2.0586 -2.6882 -2.5762 22 6 1.5946 -2.0289 -1.4417 23 1 -0.3934 0.4418 0.7650 24 1 1.7923 -0.5137 0.8901 25 1 3.5345 1.7703 0.0322 26 1 1.5615 2.4679 -1.2085 27 1 2.9845 1.0047 -1.9589 28 1 3.8159 -0.1158 -3.9620 29 1 3.7910 -2.6938 -5.4038 30 1 1.5158 -6.4292 -3.8439 31 1 3.0688 -8.6803 -3.7971 32 1 3.9441 -8.8524 -5.3793 33 1 2.2948 -11.5234 -4.4645 34 1 0.1950 -8.5828 -6.1131 35 1 0.4276 -8.4911 -4.3135 36 1 1.3785 -4.6679 -2.6268 37 1 0.9737 -2.5503 -0.7281 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_13158378.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:51 Heat of formation + Delta-G solvation = -26.701087 kcal Electronic energy + Delta-G solvation = -21904.933478 eV Core-core repulsion = 18422.098056 eV Total energy + Delta-G solvation = -3482.835423 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.115 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.84663 -41.20225 -39.75215 -38.85698 -37.02389 -36.48626 -34.24155 -33.42243 -31.27781 -30.57530 -27.36262 -26.85125 -25.45761 -24.05919 -23.08696 -22.06520 -21.51636 -20.93901 -19.54752 -18.85959 -18.38791 -18.03300 -17.38686 -16.99445 -16.66848 -16.51857 -16.17191 -15.58831 -15.36590 -15.21288 -14.95470 -14.83208 -14.64385 -14.44522 -14.07902 -13.79708 -13.57868 -13.42894 -12.88094 -12.75906 -12.39689 -12.35599 -12.25486 -11.90104 -11.85545 -11.45856 -11.09342 -10.87068 -10.35916 -10.26488 -9.48399 -8.96211 -4.90020 -0.50959 0.32648 0.81094 1.32552 1.62721 1.68781 1.84725 2.02984 2.04645 2.58783 3.25378 3.31472 3.40279 3.46410 3.52172 3.60557 3.73575 3.80750 3.84330 3.89710 4.10857 4.19126 4.30023 4.31881 4.42916 4.55284 4.63255 4.68370 4.74409 4.83430 4.85333 4.87720 4.96145 5.12948 5.21866 5.32741 5.37652 5.42677 5.80676 6.13765 6.31928 6.81079 6.83699 6.93476 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.075 4.075 3 Si 0.774 3.226 4 C -0.061 4.061 5 C -0.167 4.167 6 C -0.059 4.059 7 C -0.137 4.137 8 C -0.117 4.117 9 C 0.014 3.986 10 C 0.589 3.411 11 O -0.557 6.557 12 N -0.700 5.700 13 C 0.119 3.881 14 H 0.112 0.888 15 C -0.179 4.179 16 C 0.082 3.918 17 H 0.102 0.898 18 O -0.576 6.576 19 C -0.132 4.132 20 N -0.560 5.560 21 C 0.110 3.890 22 C -0.102 4.102 23 H 0.404 0.596 24 H 0.099 0.901 25 H -0.289 1.289 26 H -0.299 1.299 27 H 0.120 0.880 28 H 0.144 0.856 29 H 0.158 0.842 30 H 0.412 0.588 31 H 0.091 0.909 32 H 0.075 0.925 33 H 0.397 0.603 34 H 0.091 0.909 35 H 0.099 0.901 36 H 0.434 0.566 37 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.278 -1.607 5.928 6.551 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.185 4.185 3 Si 0.681 3.319 4 C -0.063 4.063 5 C -0.186 4.186 6 C -0.077 4.077 7 C -0.141 4.141 8 C -0.144 4.144 9 C -0.096 4.096 10 C 0.376 3.624 11 O -0.435 6.435 12 N -0.351 5.351 13 C 0.015 3.985 14 H 0.130 0.870 15 C -0.218 4.218 16 C 0.022 3.978 17 H 0.120 0.880 18 O -0.385 6.385 19 C -0.170 4.170 20 N -0.166 5.166 21 C 0.000 4.000 22 C -0.123 4.123 23 H 0.256 0.744 24 H 0.117 0.883 25 H -0.216 1.216 26 H -0.227 1.227 27 H 0.138 0.862 28 H 0.162 0.838 29 H 0.175 0.825 30 H 0.248 0.752 31 H 0.110 0.890 32 H 0.094 0.906 33 H 0.248 0.752 34 H 0.110 0.890 35 H 0.117 0.883 36 H 0.275 0.725 37 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -1.848 -1.157 4.403 4.913 hybrid contribution 0.311 -1.049 -0.070 1.096 sum -1.537 -2.205 4.333 5.099 Atomic orbital electron populations 1.86439 1.17007 1.82378 1.51492 1.24782 0.85997 1.10793 0.96944 0.94535 0.77261 0.75448 0.84680 1.19434 0.97232 0.93578 0.96044 1.20516 1.02327 0.99494 0.96221 1.20534 0.98038 0.92346 0.96816 1.18378 1.03645 0.95207 0.96900 1.21090 1.02381 0.90919 0.99976 1.20002 1.03364 0.96154 0.90120 1.17251 0.78958 0.82124 0.84090 1.90853 1.43204 1.84317 1.25110 1.45711 1.52206 1.10549 1.26636 1.22339 0.97968 0.81807 0.96420 0.86974 1.24169 0.99290 0.96002 1.02320 1.23122 0.95267 0.86192 0.93210 0.88012 1.86468 1.57474 1.34117 1.60401 1.23458 0.96599 0.92486 1.04473 1.41762 1.44493 1.11085 1.19291 1.18441 0.99847 0.85222 0.96536 1.20040 1.02039 0.94076 0.96095 0.74434 0.88292 1.21627 1.22749 0.86218 0.83838 0.82461 0.75155 0.89041 0.90630 0.75243 0.88999 0.88283 0.72526 0.83530 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.88 12.73 -148.98 -1.90 -1.01 16 2 C -0.08 0.11 2.80 71.23 0.20 0.31 16 3 Si 0.77 -1.69 29.75 68.60 2.04 0.35 16 4 C -0.06 -0.28 5.43 -19.83 -0.11 -0.39 16 5 C -0.17 -1.07 8.59 22.02 0.19 -0.88 16 6 C -0.06 -0.38 10.06 22.30 0.22 -0.15 16 7 C -0.14 -1.02 6.16 -21.36 -0.13 -1.15 16 8 C -0.12 -0.86 10.53 22.55 0.24 -0.62 16 9 C 0.01 0.07 6.97 39.92 0.28 0.34 16 10 C 0.59 3.34 7.80 86.56 0.68 4.02 16 11 O -0.56 -7.45 16.44 -4.16 -0.07 -7.52 16 12 N -0.70 0.88 5.35 -443.66 -2.37 -1.50 16 13 C 0.12 -0.16 4.24 45.52 0.19 0.03 16 14 H 0.11 0.16 7.47 -2.39 -0.02 0.15 16 15 C -0.18 0.44 7.71 31.12 0.24 0.68 16 16 C 0.08 -0.30 5.21 31.12 0.16 -0.13 16 17 H 0.10 -0.64 8.14 -2.39 -0.02 -0.66 16 18 O -0.58 0.86 13.67 -148.98 -2.04 -1.18 16 19 C -0.13 0.52 7.66 31.12 0.24 0.76 16 20 N -0.56 -0.13 6.07 -177.18 -1.08 -1.21 16 21 C 0.11 0.53 7.25 39.13 0.28 0.81 16 22 C -0.10 -0.36 9.61 22.37 0.22 -0.14 16 23 H 0.40 -4.91 8.74 -74.06 -0.65 -5.55 16 24 H 0.10 -0.60 7.96 -2.38 -0.02 -0.62 16 25 H -0.29 -0.97 7.11 99.48 0.71 -0.27 16 26 H -0.30 -1.79 7.11 99.48 0.71 -1.08 16 27 H 0.12 0.64 4.82 -2.91 -0.01 0.62 16 28 H 0.14 0.36 8.06 -2.91 -0.02 0.33 16 29 H 0.16 1.03 8.06 -2.91 -0.02 1.01 16 30 H 0.41 -2.89 7.78 -92.70 -0.72 -3.61 16 31 H 0.09 -0.17 8.14 -2.38 -0.02 -0.19 16 32 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 33 H 0.40 -3.58 9.12 -74.05 -0.68 -4.26 16 34 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 35 H 0.10 -0.44 8.12 -2.39 -0.02 -0.46 16 36 H 0.43 -3.05 8.12 -92.71 -0.75 -3.80 16 37 H 0.15 -0.11 8.06 -2.91 -0.02 -0.13 16 Total: 0.00 -23.59 317.13 -4.12 -27.71 By element: Atomic # 1 Polarization: -17.52 SS G_CDS: -1.60 Total: -19.12 kcal Atomic # 6 Polarization: 0.58 SS G_CDS: 2.90 Total: 3.48 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -3.45 Total: -2.71 kcal Atomic # 8 Polarization: -5.71 SS G_CDS: -4.00 Total: -9.72 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: 2.04 Total: 0.35 kcal Total: -23.59 -4.12 -27.71 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13158378.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.010 kcal (2) G-P(sol) polarization free energy of solvation -23.595 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.585 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.116 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.711 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.701 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds