Wall clock time and date at job start Sun Mar 7 2021 22:00:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86296 * 109.47207 * 2 1 4 4 C 1.50695 * 109.46962 * 120.00209 * 2 1 3 5 5 C 1.38320 * 119.88193 * 64.99811 * 4 2 1 6 6 C 1.38024 * 120.12142 * 179.97438 * 5 4 2 7 7 C 1.39337 * 119.87801 * 0.02562 * 6 5 4 8 8 C 1.48393 * 120.11763 * 180.02562 * 7 6 5 9 9 C 1.39310 * 120.12276 * 56.72384 * 8 7 6 10 10 C 1.50701 * 120.06330 * 0.02562 * 9 8 7 11 11 C 1.50694 * 109.47153 * 81.10189 * 10 9 8 12 12 O 1.21288 * 119.99831 * 5.69449 * 11 10 9 13 13 N 1.34771 * 120.00213 * 185.68871 * 11 10 9 14 14 C 1.46502 * 120.00095 * 179.97438 * 13 11 10 15 15 H 1.09004 * 112.84901 * 23.81399 * 14 13 11 16 16 C 1.53782 * 113.61469 * 155.00210 * 14 13 11 17 17 C 1.53781 * 87.17234 * 139.94093 * 16 14 13 18 18 H 1.09008 * 113.61042 * 89.15795 * 17 16 14 19 19 O 1.42900 * 113.61628 * 220.06093 * 17 16 14 20 20 C 1.53781 * 113.61726 * 252.50276 * 14 13 11 21 21 C 1.38048 * 119.87520 * 180.29894 * 9 8 7 22 22 C 1.38295 * 120.12025 * 359.42179 * 21 9 8 23 23 C 1.38347 * 120.24113 * 0.60157 * 22 21 9 24 24 C 1.37987 * 120.12700 * 359.67562 * 23 22 21 25 25 C 1.39333 * 119.75867 * 0.26715 * 7 6 5 26 26 C 1.38021 * 119.87637 * 359.42873 * 25 7 6 27 27 H 0.96704 * 114.00419 * 60.00002 * 1 2 3 28 28 H 1.08996 * 109.47108 * 240.00032 * 2 1 3 29 29 H 1.48498 * 109.99945 * 298.68103 * 3 2 1 30 30 H 1.48503 * 109.99816 * 59.99773 * 3 2 1 31 31 H 1.07996 * 119.93855 * 359.97438 * 5 4 2 32 32 H 1.07997 * 120.05941 * 180.02562 * 6 5 4 33 33 H 1.09005 * 109.47048 * 321.10222 * 10 9 8 34 34 H 1.08999 * 109.47396 * 201.10735 * 10 9 8 35 35 H 0.96996 * 120.00375 * 0.02562 * 13 11 10 36 36 H 1.09000 * 113.61545 * 254.53319 * 16 14 13 37 37 H 1.09001 * 113.61012 * 25.35655 * 16 14 13 38 38 H 0.96698 * 113.99748 * 180.02562 * 19 17 16 39 39 H 1.08994 * 113.61648 * 334.56776 * 20 14 13 40 40 H 1.09007 * 113.61390 * 105.38645 * 20 14 13 41 41 H 1.08000 * 119.93926 * 179.72139 * 21 9 8 42 42 H 1.07994 * 119.88046 * 180.30065 * 22 21 9 43 43 H 1.08001 * 119.93414 * 179.70481 * 23 22 21 44 44 H 1.07996 * 120.06880 * 180.02562 * 24 23 22 45 45 H 1.08000 * 120.06045 * 179.72710 * 25 7 6 46 46 H 1.08001 * 119.93646 * 180.27173 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6830 -2.0611 1.3959 6 6 2.1412 -2.7168 2.5207 7 6 2.8545 -2.0156 3.4907 8 6 3.3501 -2.7154 4.7017 9 6 4.1811 -3.8265 4.5763 10 6 4.5798 -4.3206 3.2096 11 6 5.7200 -3.4857 2.6864 12 8 6.2334 -2.6472 3.3967 13 7 6.1694 -3.6709 1.4294 14 6 7.2776 -2.8588 0.9206 15 1 7.9097 -2.4605 1.7144 16 6 8.0658 -3.5341 -0.2141 17 6 8.1283 -2.1538 -0.8893 18 1 8.9934 -1.5611 -0.5920 19 8 7.9464 -2.2007 -2.3059 20 6 6.8455 -1.8050 -0.1127 21 6 4.6342 -4.4773 5.7063 22 6 4.2743 -4.0212 6.9612 23 6 3.4489 -2.9185 7.0915 24 6 2.9856 -2.2637 5.9688 25 6 3.0964 -0.6538 3.3218 26 6 2.6390 -0.0095 2.1902 27 1 -0.3934 0.4417 -0.7650 28 1 1.7923 -0.5138 -0.8900 29 1 1.5879 2.4585 -1.2242 30 1 1.5614 2.4678 1.2085 31 1 1.1297 -2.6035 0.6436 32 1 1.9472 -3.7715 2.6486 33 1 3.7297 -4.2401 2.5319 34 1 4.8932 -5.3624 3.2770 35 1 5.7587 -4.3412 0.8613 36 1 9.0397 -3.9129 0.0961 37 1 7.4847 -4.2676 -0.7730 38 1 7.9850 -1.3356 -2.7362 39 1 5.9304 -2.0648 -0.6447 40 1 6.8328 -0.7882 0.2798 41 1 5.2748 -5.3415 5.6101 42 1 4.6349 -4.5304 7.8426 43 1 3.1671 -2.5694 8.0739 44 1 2.3416 -1.4028 6.0716 45 1 3.6450 -0.1046 4.0727 46 1 2.8298 1.0451 2.0562 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_13158394.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:55 Heat of formation + Delta-G solvation = -33.514270 kcal Electronic energy + Delta-G solvation = -29696.679065 eV Core-core repulsion = 25711.446592 eV Total energy + Delta-G solvation = -3985.232472 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.151 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.51169 -40.76874 -39.80734 -39.12683 -37.66671 -36.32688 -34.36285 -33.85885 -33.26740 -31.92657 -30.73397 -28.84339 -26.81096 -26.56002 -25.12420 -23.91323 -23.30840 -22.60419 -21.64630 -21.33545 -20.76817 -18.79469 -18.56193 -18.21978 -17.92029 -17.16089 -16.95266 -16.79973 -16.40494 -16.27685 -16.12772 -15.54288 -15.50729 -15.24298 -14.91521 -14.70602 -14.52189 -14.34685 -14.08186 -13.96449 -13.68111 -13.60198 -13.53478 -13.51415 -13.20256 -13.02914 -12.65236 -12.38261 -12.28132 -12.20788 -11.98508 -11.75103 -11.70986 -11.66069 -10.93788 -10.71804 -10.52665 -10.08402 -9.97712 -9.86614 -9.65874 -9.14081 -4.99562 -0.01985 0.46151 0.49020 0.68828 1.25085 1.56019 1.73647 1.92615 2.17873 2.64144 2.93824 3.23689 3.33863 3.42297 3.59276 3.60470 3.72192 3.77945 3.84898 3.86164 3.91364 3.94646 4.01992 4.07110 4.20839 4.29612 4.32543 4.41172 4.47330 4.48897 4.57840 4.65762 4.67058 4.68833 4.73317 4.88515 4.91222 4.93806 5.02259 5.07262 5.12502 5.16762 5.40808 5.47850 5.54182 5.55392 5.59625 5.65822 5.73558 5.98679 6.10595 6.40469 6.52868 6.63685 7.31404 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.074 4.074 3 Si 0.679 3.321 4 C -0.072 4.072 5 C -0.090 4.090 6 C -0.115 4.115 7 C -0.036 4.036 8 C -0.036 4.036 9 C -0.052 4.052 10 C -0.114 4.114 11 C 0.520 3.480 12 O -0.525 6.525 13 N -0.721 5.721 14 C 0.126 3.874 15 H 0.118 0.882 16 C -0.138 4.138 17 C 0.079 3.921 18 H 0.087 0.913 19 O -0.558 6.558 20 C -0.181 4.181 21 C -0.106 4.106 22 C -0.115 4.115 23 C -0.117 4.117 24 C -0.104 4.104 25 C -0.093 4.093 26 C -0.112 4.112 27 H 0.379 0.621 28 H 0.075 0.925 29 H -0.260 1.260 30 H -0.255 1.255 31 H 0.126 0.874 32 H 0.127 0.873 33 H 0.108 0.892 34 H 0.104 0.896 35 H 0.401 0.599 36 H 0.081 0.919 37 H 0.095 0.905 38 H 0.381 0.619 39 H 0.093 0.907 40 H 0.076 0.924 41 H 0.123 0.877 42 H 0.124 0.876 43 H 0.125 0.875 44 H 0.124 0.876 45 H 0.128 0.872 46 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.616 -1.449 -2.881 3.607 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.184 4.184 3 Si 0.580 3.420 4 C -0.072 4.072 5 C -0.108 4.108 6 C -0.132 4.132 7 C -0.036 4.036 8 C -0.036 4.036 9 C -0.053 4.053 10 C -0.153 4.153 11 C 0.307 3.693 12 O -0.400 6.400 13 N -0.372 5.372 14 C 0.021 3.979 15 H 0.136 0.864 16 C -0.176 4.176 17 C 0.019 3.981 18 H 0.104 0.896 19 O -0.364 6.364 20 C -0.220 4.220 21 C -0.124 4.124 22 C -0.133 4.133 23 C -0.135 4.135 24 C -0.122 4.122 25 C -0.111 4.111 26 C -0.129 4.129 27 H 0.227 0.773 28 H 0.093 0.907 29 H -0.186 1.186 30 H -0.179 1.179 31 H 0.144 0.856 32 H 0.145 0.855 33 H 0.126 0.874 34 H 0.122 0.878 35 H 0.236 0.764 36 H 0.100 0.900 37 H 0.113 0.887 38 H 0.229 0.771 39 H 0.112 0.888 40 H 0.095 0.905 41 H 0.141 0.859 42 H 0.142 0.858 43 H 0.143 0.857 44 H 0.142 0.858 45 H 0.146 0.854 46 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 1.821 -0.946 -1.669 2.645 hybrid contribution -1.275 0.135 -0.881 1.555 sum 0.547 -0.811 -2.550 2.731 Atomic orbital electron populations 1.86599 1.17761 1.80120 1.49756 1.24778 0.84478 1.10840 0.98328 0.95056 0.91791 0.74878 0.80264 1.19252 0.98693 0.94110 0.95128 1.20890 0.98468 0.93800 0.97615 1.21208 0.98406 0.99893 0.93737 1.18780 0.97722 0.93331 0.93749 1.18533 0.97794 0.94921 0.92314 1.19184 0.97261 0.95203 0.93626 1.20878 0.98320 1.00452 0.95697 1.20479 0.83887 0.83665 0.81304 1.90734 1.58071 1.34303 1.56886 1.45900 1.36237 1.40555 1.14555 1.22171 0.88797 0.92252 0.94707 0.86442 1.23465 1.01514 0.97042 0.95568 1.23113 0.96671 0.97693 0.80617 0.89567 1.86514 1.95353 1.35138 1.19368 1.24213 0.99595 1.00385 0.97789 1.20931 0.99541 0.99995 0.91944 1.21184 0.97946 0.96801 0.97341 1.21113 0.97804 0.95972 0.98570 1.21172 0.99901 0.99813 0.91341 1.21128 0.98990 0.93515 0.97423 1.20919 0.98759 0.99407 0.93818 0.77279 0.90665 1.18572 1.17944 0.85634 0.85498 0.87366 0.87754 0.76429 0.90022 0.88665 0.77116 0.88815 0.90498 0.85909 0.85811 0.85749 0.85819 0.85404 0.85565 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.75 12.81 -35.23 -0.45 -1.20 16 2 C -0.07 -0.01 2.79 36.00 0.10 0.09 16 3 Si 0.68 -0.27 29.84 -169.99 -5.07 -5.34 16 4 C -0.07 -0.11 5.39 -104.56 -0.56 -0.68 16 5 C -0.09 -0.11 9.67 -39.63 -0.38 -0.49 16 6 C -0.11 -0.11 7.82 -39.25 -0.31 -0.42 16 7 C -0.04 -0.08 4.78 -104.90 -0.50 -0.58 16 8 C -0.04 -0.09 5.40 -104.90 -0.57 -0.65 16 9 C -0.05 -0.09 4.38 -104.29 -0.46 -0.55 16 10 C -0.11 0.05 5.31 -29.04 -0.15 -0.10 16 11 C 0.52 0.79 7.66 -10.99 -0.08 0.70 16 12 O -0.53 -2.92 15.65 5.55 0.09 -2.83 16 13 N -0.72 0.68 5.35 -53.01 -0.28 0.39 16 14 C 0.13 -0.09 4.24 -67.12 -0.28 -0.37 16 15 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 16 C -0.14 0.21 7.66 -25.92 -0.20 0.01 16 17 C 0.08 -0.12 5.22 -25.83 -0.13 -0.25 16 18 H 0.09 -0.22 8.14 -51.92 -0.42 -0.65 16 19 O -0.56 0.26 13.67 -35.23 -0.48 -0.22 16 20 C -0.18 0.24 7.72 -25.83 -0.20 0.04 16 21 C -0.11 -0.16 9.66 -39.63 -0.38 -0.54 16 22 C -0.11 -0.15 10.04 -39.52 -0.40 -0.55 16 23 C -0.12 -0.17 10.03 -39.63 -0.40 -0.57 16 24 C -0.10 -0.23 9.63 -39.25 -0.38 -0.61 16 25 C -0.09 -0.21 9.62 -39.25 -0.38 -0.59 16 26 C -0.11 -0.18 8.65 -39.63 -0.34 -0.53 16 27 H 0.38 -0.98 8.74 45.56 0.40 -0.58 16 28 H 0.08 -0.12 7.96 -51.93 -0.41 -0.53 16 29 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 30 H -0.25 -0.72 7.04 56.52 0.40 -0.32 16 31 H 0.13 0.01 8.06 -52.49 -0.42 -0.41 16 32 H 0.13 -0.09 7.11 -52.49 -0.37 -0.46 16 33 H 0.11 -0.19 4.83 -51.93 -0.25 -0.44 16 34 H 0.10 -0.28 8.01 -51.93 -0.42 -0.70 16 35 H 0.40 -1.33 8.73 -40.82 -0.36 -1.69 16 36 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 37 H 0.09 -0.14 8.12 -51.93 -0.42 -0.56 16 38 H 0.38 -1.65 9.12 45.56 0.42 -1.23 16 39 H 0.09 -0.09 8.14 -51.93 -0.42 -0.52 16 40 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 41 H 0.12 -0.04 8.04 -52.49 -0.42 -0.47 16 42 H 0.12 -0.07 8.06 -52.49 -0.42 -0.50 16 43 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 44 H 0.12 0.13 8.06 -52.49 -0.42 -0.29 16 45 H 0.13 0.23 8.06 -52.49 -0.42 -0.19 16 46 H 0.13 0.03 4.85 -52.49 -0.25 -0.22 16 LS Contribution 382.98 15.07 5.77 5.77 Total: 0.00 -9.70 382.98 -11.93 -21.63 By element: Atomic # 1 Polarization: -6.07 SS G_CDS: -5.49 Total: -11.56 kcal Atomic # 6 Polarization: -0.63 SS G_CDS: -6.01 Total: -6.64 kcal Atomic # 7 Polarization: 0.68 SS G_CDS: -0.28 Total: 0.39 kcal Atomic # 8 Polarization: -3.41 SS G_CDS: -0.85 Total: -4.26 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.07 Total: -5.34 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -9.70 -11.93 -21.63 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13158394.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.884 kcal (2) G-P(sol) polarization free energy of solvation -9.702 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.586 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.928 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.630 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.514 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds