Wall clock time and date at job start Sun Mar 7 2021 22:00:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86296 * 109.47207 * 2 1 4 4 C 1.50695 * 109.46962 * 120.00209 * 2 1 3 5 5 C 1.38320 * 119.88193 * 64.99811 * 4 2 1 6 6 C 1.38024 * 120.12142 * 179.97438 * 5 4 2 7 7 C 1.39337 * 119.87801 * 0.02562 * 6 5 4 8 8 C 1.48393 * 120.11763 * 180.02562 * 7 6 5 9 9 C 1.39310 * 120.12276 * 56.72384 * 8 7 6 10 10 C 1.50701 * 120.06330 * 0.02562 * 9 8 7 11 11 C 1.50694 * 109.47153 * 81.10189 * 10 9 8 12 12 O 1.21288 * 119.99831 * 5.69449 * 11 10 9 13 13 N 1.34771 * 120.00213 * 185.68871 * 11 10 9 14 14 C 1.46502 * 120.00095 * 179.97438 * 13 11 10 15 15 H 1.09004 * 112.84901 * 23.81399 * 14 13 11 16 16 C 1.53782 * 113.61469 * 155.00210 * 14 13 11 17 17 C 1.53781 * 87.17234 * 139.94093 * 16 14 13 18 18 H 1.09008 * 113.61042 * 89.15795 * 17 16 14 19 19 O 1.42900 * 113.61628 * 220.06093 * 17 16 14 20 20 C 1.53781 * 113.61726 * 252.50276 * 14 13 11 21 21 C 1.38048 * 119.87520 * 180.29894 * 9 8 7 22 22 C 1.38295 * 120.12025 * 359.42179 * 21 9 8 23 23 C 1.38347 * 120.24113 * 0.60157 * 22 21 9 24 24 C 1.37987 * 120.12700 * 359.67562 * 23 22 21 25 25 C 1.39333 * 119.75867 * 0.26715 * 7 6 5 26 26 C 1.38021 * 119.87637 * 359.42873 * 25 7 6 27 27 H 0.96704 * 114.00419 * 60.00002 * 1 2 3 28 28 H 1.08996 * 109.47108 * 240.00032 * 2 1 3 29 29 H 1.48498 * 109.99945 * 298.68103 * 3 2 1 30 30 H 1.48503 * 109.99816 * 59.99773 * 3 2 1 31 31 H 1.07996 * 119.93855 * 359.97438 * 5 4 2 32 32 H 1.07997 * 120.05941 * 180.02562 * 6 5 4 33 33 H 1.09005 * 109.47048 * 321.10222 * 10 9 8 34 34 H 1.08999 * 109.47396 * 201.10735 * 10 9 8 35 35 H 0.96996 * 120.00375 * 0.02562 * 13 11 10 36 36 H 1.09000 * 113.61545 * 254.53319 * 16 14 13 37 37 H 1.09001 * 113.61012 * 25.35655 * 16 14 13 38 38 H 0.96698 * 113.99748 * 180.02562 * 19 17 16 39 39 H 1.08994 * 113.61648 * 334.56776 * 20 14 13 40 40 H 1.09007 * 113.61390 * 105.38645 * 20 14 13 41 41 H 1.08000 * 119.93926 * 179.72139 * 21 9 8 42 42 H 1.07994 * 119.88046 * 180.30065 * 22 21 9 43 43 H 1.08001 * 119.93414 * 179.70481 * 23 22 21 44 44 H 1.07996 * 120.06880 * 180.02562 * 24 23 22 45 45 H 1.08000 * 120.06045 * 179.72710 * 25 7 6 46 46 H 1.08001 * 119.93646 * 180.27173 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6830 -2.0611 1.3959 6 6 2.1412 -2.7168 2.5207 7 6 2.8545 -2.0156 3.4907 8 6 3.3501 -2.7154 4.7017 9 6 4.1811 -3.8265 4.5763 10 6 4.5798 -4.3206 3.2096 11 6 5.7200 -3.4857 2.6864 12 8 6.2334 -2.6472 3.3967 13 7 6.1694 -3.6709 1.4294 14 6 7.2776 -2.8588 0.9206 15 1 7.9097 -2.4605 1.7144 16 6 8.0658 -3.5341 -0.2141 17 6 8.1283 -2.1538 -0.8893 18 1 8.9934 -1.5611 -0.5920 19 8 7.9464 -2.2007 -2.3059 20 6 6.8455 -1.8050 -0.1127 21 6 4.6342 -4.4773 5.7063 22 6 4.2743 -4.0212 6.9612 23 6 3.4489 -2.9185 7.0915 24 6 2.9856 -2.2637 5.9688 25 6 3.0964 -0.6538 3.3218 26 6 2.6390 -0.0095 2.1902 27 1 -0.3934 0.4417 -0.7650 28 1 1.7923 -0.5138 -0.8900 29 1 1.5879 2.4585 -1.2242 30 1 1.5614 2.4678 1.2085 31 1 1.1297 -2.6035 0.6436 32 1 1.9472 -3.7715 2.6486 33 1 3.7297 -4.2401 2.5319 34 1 4.8932 -5.3624 3.2770 35 1 5.7587 -4.3412 0.8613 36 1 9.0397 -3.9129 0.0961 37 1 7.4847 -4.2676 -0.7730 38 1 7.9850 -1.3356 -2.7362 39 1 5.9304 -2.0648 -0.6447 40 1 6.8328 -0.7882 0.2798 41 1 5.2748 -5.3415 5.6101 42 1 4.6349 -4.5304 7.8426 43 1 3.1671 -2.5694 8.0739 44 1 2.3416 -1.4028 6.0716 45 1 3.6450 -0.1046 4.0727 46 1 2.8298 1.0451 2.0562 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_13158394.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:54 Heat of formation + Delta-G solvation = -33.869943 kcal Electronic energy + Delta-G solvation = -29696.694488 eV Core-core repulsion = 25711.446592 eV Total energy + Delta-G solvation = -3985.247896 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.151 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.55930 -40.77094 -39.83210 -39.17518 -37.70808 -36.27467 -34.42919 -33.89097 -33.29028 -31.99887 -30.79601 -28.86023 -26.70117 -26.59999 -25.07652 -23.98669 -23.36218 -22.65386 -21.70959 -21.35821 -20.70441 -18.70423 -18.58459 -18.26751 -17.95784 -17.17151 -16.99853 -16.81319 -16.44874 -16.27532 -16.09497 -15.59430 -15.55662 -15.31081 -14.95189 -14.71153 -14.55306 -14.40236 -14.10023 -14.04751 -13.71787 -13.58951 -13.56554 -13.42866 -13.24301 -13.00971 -12.62568 -12.45360 -12.25038 -12.22912 -12.02553 -11.82506 -11.70564 -11.64479 -10.96629 -10.70773 -10.54206 -10.16063 -9.98443 -9.95132 -9.73729 -9.22275 -4.98922 -0.10387 0.37088 0.41049 0.60232 1.24813 1.52768 1.67298 1.88734 2.21116 2.57576 2.87468 3.36223 3.40669 3.52401 3.55150 3.69755 3.71493 3.82753 3.87191 3.88776 3.94583 3.96006 4.00005 4.10786 4.17586 4.31646 4.33991 4.41825 4.52789 4.54918 4.57101 4.61579 4.69588 4.78296 4.81586 4.85736 4.97034 5.00037 5.01120 5.04245 5.09864 5.22174 5.33185 5.40318 5.47495 5.52827 5.57946 5.59548 5.65411 5.91719 6.05322 6.56329 6.58696 6.92274 7.30386 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.078 4.078 3 Si 0.747 3.253 4 C -0.083 4.083 5 C -0.093 4.093 6 C -0.114 4.114 7 C -0.042 4.042 8 C -0.050 4.050 9 C -0.062 4.062 10 C -0.111 4.111 11 C 0.519 3.481 12 O -0.572 6.572 13 N -0.708 5.708 14 C 0.122 3.878 15 H 0.099 0.901 16 C -0.133 4.133 17 C 0.080 3.920 18 H 0.096 0.904 19 O -0.576 6.576 20 C -0.175 4.175 21 C -0.117 4.117 22 C -0.124 4.124 23 C -0.127 4.127 24 C -0.121 4.121 25 C -0.109 4.109 26 C -0.120 4.120 27 H 0.395 0.605 28 H 0.100 0.900 29 H -0.280 1.280 30 H -0.304 1.304 31 H 0.140 0.860 32 H 0.145 0.855 33 H 0.123 0.877 34 H 0.131 0.869 35 H 0.415 0.585 36 H 0.084 0.916 37 H 0.098 0.902 38 H 0.396 0.604 39 H 0.094 0.906 40 H 0.073 0.927 41 H 0.140 0.860 42 H 0.141 0.859 43 H 0.138 0.862 44 H 0.125 0.875 45 H 0.122 0.878 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.627 -2.778 -4.102 5.214 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.187 4.187 3 Si 0.653 3.347 4 C -0.083 4.083 5 C -0.110 4.110 6 C -0.131 4.131 7 C -0.042 4.042 8 C -0.050 4.050 9 C -0.062 4.062 10 C -0.150 4.150 11 C 0.306 3.694 12 O -0.451 6.451 13 N -0.360 5.360 14 C 0.016 3.984 15 H 0.117 0.883 16 C -0.171 4.171 17 C 0.021 3.979 18 H 0.114 0.886 19 O -0.384 6.384 20 C -0.214 4.214 21 C -0.135 4.135 22 C -0.142 4.142 23 C -0.145 4.145 24 C -0.139 4.139 25 C -0.127 4.127 26 C -0.137 4.137 27 H 0.246 0.754 28 H 0.118 0.882 29 H -0.207 1.207 30 H -0.232 1.232 31 H 0.157 0.843 32 H 0.163 0.837 33 H 0.140 0.860 34 H 0.148 0.852 35 H 0.252 0.748 36 H 0.103 0.897 37 H 0.116 0.884 38 H 0.246 0.754 39 H 0.112 0.888 40 H 0.091 0.909 41 H 0.158 0.842 42 H 0.159 0.841 43 H 0.156 0.844 44 H 0.143 0.857 45 H 0.140 0.860 46 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 1.832 -2.297 -2.949 4.163 hybrid contribution -1.295 0.598 -0.489 1.508 sum 0.537 -1.700 -3.437 3.872 Atomic orbital electron populations 1.86552 1.18370 1.80562 1.51130 1.24868 0.84092 1.11045 0.98684 0.94274 0.90784 0.73255 0.76398 1.19475 0.98648 0.94579 0.95564 1.21100 0.98278 0.93749 0.97918 1.21394 0.97768 1.00710 0.93277 1.18867 0.98027 0.93265 0.94066 1.18717 0.98361 0.95453 0.92477 1.19454 0.96914 0.95009 0.94856 1.20939 0.98014 1.01295 0.94735 1.20816 0.83906 0.83139 0.81490 1.90717 1.59737 1.36413 1.58223 1.45820 1.35771 1.40395 1.14034 1.22121 0.88914 0.92873 0.94468 0.88256 1.23435 1.01506 0.97177 0.94975 1.23147 0.96768 0.97705 0.80327 0.88611 1.86469 1.95393 1.36755 1.19767 1.24152 0.99837 0.99939 0.97439 1.21245 0.99657 1.00604 0.91984 1.21479 0.97761 0.96806 0.98143 1.21352 0.97896 0.96156 0.99048 1.21345 1.00497 1.00246 0.91859 1.21202 0.99648 0.94026 0.97784 1.21036 0.99038 0.99794 0.93871 0.75444 0.88210 1.20729 1.23218 0.84251 0.83746 0.85953 0.85152 0.74829 0.89715 0.88359 0.75364 0.88778 0.90855 0.84220 0.84117 0.84370 0.85743 0.86042 0.85013 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.25 12.81 -148.98 -1.91 -3.16 16 2 C -0.08 0.02 2.79 71.23 0.20 0.22 16 3 Si 0.75 -0.29 29.84 68.60 2.05 1.76 16 4 C -0.08 -0.26 5.39 -19.83 -0.11 -0.36 16 5 C -0.09 -0.16 9.67 22.24 0.21 0.05 16 6 C -0.11 -0.20 7.82 22.48 0.18 -0.02 16 7 C -0.04 -0.22 4.78 -20.04 -0.10 -0.31 16 8 C -0.05 -0.30 5.40 -20.04 -0.11 -0.41 16 9 C -0.06 -0.24 4.38 -19.65 -0.09 -0.32 16 10 C -0.11 0.17 5.31 29.10 0.15 0.32 16 11 C 0.52 1.68 7.66 87.66 0.67 2.35 16 12 O -0.57 -7.15 15.65 -3.05 -0.05 -7.20 16 13 N -0.71 1.53 5.35 -440.03 -2.36 -0.83 16 14 C 0.12 -0.14 4.24 45.52 0.19 0.06 16 15 H 0.10 0.29 7.46 -2.38 -0.02 0.28 16 16 C -0.13 0.46 7.66 31.12 0.24 0.70 16 17 C 0.08 -0.27 5.22 31.18 0.16 -0.11 16 18 H 0.10 -0.53 8.14 -2.38 -0.02 -0.55 16 19 O -0.58 0.99 13.67 -148.98 -2.04 -1.05 16 20 C -0.17 0.46 7.72 31.18 0.24 0.70 16 21 C -0.12 -0.35 9.66 22.24 0.21 -0.13 16 22 C -0.12 -0.36 10.04 22.31 0.22 -0.13 16 23 C -0.13 -0.49 10.03 22.24 0.22 -0.27 16 24 C -0.12 -0.72 9.63 22.48 0.22 -0.50 16 25 C -0.11 -0.68 9.62 22.48 0.22 -0.47 16 26 C -0.12 -0.53 8.65 22.24 0.19 -0.34 16 27 H 0.40 -2.30 8.74 -74.05 -0.65 -2.94 16 28 H 0.10 -0.50 7.96 -2.39 -0.02 -0.52 16 29 H -0.28 -0.80 7.11 99.48 0.71 -0.09 16 30 H -0.30 -2.36 7.04 99.48 0.70 -1.66 16 31 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 32 H 0.14 -0.36 7.11 -2.91 -0.02 -0.38 16 33 H 0.12 -0.57 4.83 -2.38 -0.01 -0.59 16 34 H 0.13 -0.92 8.01 -2.39 -0.02 -0.94 16 35 H 0.41 -3.21 8.73 -92.71 -0.81 -4.02 16 36 H 0.08 -0.34 8.14 -2.39 -0.02 -0.35 16 37 H 0.10 -0.38 8.12 -2.39 -0.02 -0.40 16 38 H 0.40 -3.72 9.12 -74.06 -0.68 -4.40 16 39 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 40 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 41 H 0.14 -0.20 8.04 -2.91 -0.02 -0.22 16 42 H 0.14 -0.20 8.06 -2.91 -0.02 -0.23 16 43 H 0.14 -0.01 8.06 -2.91 -0.02 -0.03 16 44 H 0.12 0.54 8.06 -2.91 -0.02 0.52 16 45 H 0.12 0.78 8.06 -2.91 -0.02 0.76 16 46 H 0.13 0.27 4.85 -2.91 -0.01 0.26 16 Total: 0.00 -23.37 382.98 -2.23 -25.60 By element: Atomic # 1 Polarization: -15.07 SS G_CDS: -1.06 Total: -16.14 kcal Atomic # 6 Polarization: -2.12 SS G_CDS: 3.14 Total: 1.02 kcal Atomic # 7 Polarization: 1.53 SS G_CDS: -2.36 Total: -0.83 kcal Atomic # 8 Polarization: -7.42 SS G_CDS: -3.99 Total: -11.41 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: 2.05 Total: 1.76 kcal Total: -23.37 -2.23 -25.60 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13158394.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.273 kcal (2) G-P(sol) polarization free energy of solvation -23.372 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.645 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.597 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.870 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds