Wall clock time and date at job start Sun Mar 7 2021 22:01:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86300 * 109.47026 * 2 1 4 4 C 1.50704 * 109.47097 * 120.00179 * 2 1 3 5 5 C 1.34703 * 125.66339 * 64.71713 * 4 2 1 6 6 C 1.40970 * 107.02536 * 180.26371 * 5 4 2 7 7 C 1.35938 * 106.74380 * 359.97438 * 6 5 4 8 8 C 1.47814 * 125.92902 * 179.97438 * 7 6 5 9 9 C 1.39804 * 120.00376 * 359.97438 * 8 7 6 10 10 C 1.37806 * 120.24559 * 180.02562 * 9 8 7 11 11 C 1.38778 * 120.24874 * 359.96749 * 10 9 8 12 12 O 1.35650 * 120.00543 * 180.02562 * 11 10 9 13 13 C 1.40250 * 119.99006 * 0.02562 * 11 10 9 14 14 C 1.47570 * 120.11748 * 179.97438 * 13 11 10 15 15 O 1.21577 * 120.00345 * 359.97438 * 14 13 11 16 16 N 1.34776 * 119.99602 * 179.97438 * 14 13 11 17 17 C 1.46507 * 119.99891 * 180.02562 * 16 14 13 18 18 H 1.08999 * 112.84493 * 23.79942 * 17 16 14 19 19 C 1.53781 * 113.61516 * 155.00102 * 17 16 14 20 20 C 1.53785 * 87.07876 * 139.98100 * 19 17 16 21 21 H 1.08998 * 113.61470 * 89.19827 * 20 19 17 22 22 O 1.42900 * 113.61389 * 220.01977 * 20 19 17 23 23 C 1.53777 * 113.61331 * 252.50142 * 17 16 14 24 24 C 1.39217 * 119.99830 * 179.70055 * 8 7 6 25 25 O 1.34344 * 125.66222 * 245.02413 * 4 2 1 26 26 H 0.96701 * 114.00420 * 60.00120 * 1 2 3 27 27 H 1.09004 * 109.46801 * 239.99892 * 2 1 3 28 28 H 1.48494 * 109.99994 * 60.00070 * 3 2 1 29 29 H 1.48499 * 109.99866 * 181.31974 * 3 2 1 30 30 H 1.07999 * 126.48666 * 0.24102 * 5 4 2 31 31 H 1.08005 * 126.62692 * 180.02562 * 6 5 4 32 32 H 1.08008 * 119.87627 * 359.97438 * 9 8 7 33 33 H 1.08004 * 119.87979 * 179.97438 * 10 9 8 34 34 H 0.96702 * 113.99633 * 90.00749 * 12 11 10 35 35 H 0.97003 * 120.00706 * 359.97438 * 16 14 13 36 36 H 1.08999 * 113.61244 * 254.52516 * 19 17 16 37 37 H 1.09002 * 113.61556 * 25.34815 * 19 17 16 38 38 H 0.96695 * 113.99984 * 180.02562 * 22 20 19 39 39 H 1.09000 * 113.61552 * 334.56267 * 23 17 16 40 40 H 1.09001 * 113.62078 * 105.46770 * 23 17 16 41 41 H 1.07997 * 120.12277 * 359.97438 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.7524 -2.0156 1.5118 6 6 2.3738 -2.2591 2.7535 7 6 2.9034 -1.0767 3.1650 8 6 3.6515 -0.8512 4.4198 9 6 3.8664 -1.9112 5.3056 10 6 4.5627 -1.7065 6.4771 11 6 5.0565 -0.4469 6.7859 12 8 5.7417 -0.2511 7.9401 13 6 4.8469 0.6237 5.9044 14 6 5.3702 1.9645 6.2303 15 8 5.9839 2.1427 7.2646 16 7 5.1679 2.9914 5.3812 17 6 5.6879 4.3224 5.7044 18 1 6.5323 4.2911 6.3929 19 6 5.9326 5.2049 4.4689 20 6 5.3708 6.3762 5.2919 21 1 6.1282 6.9085 5.8672 22 8 4.5280 7.2517 4.5401 23 6 4.5974 5.3281 6.1094 24 6 4.1471 0.4154 4.7167 25 8 2.6269 -0.1460 2.2317 26 1 -0.3934 0.4417 -0.7650 27 1 1.7923 -0.5139 -0.8900 28 1 1.5615 2.4679 1.2085 29 1 3.5345 1.7703 -0.0321 30 1 1.2313 -2.7385 0.9017 31 1 2.4208 -3.2029 3.2765 32 1 3.4845 -2.8940 5.0714 33 1 4.7249 -2.5295 7.1574 34 1 6.6955 -0.3884 7.8594 35 1 4.6786 2.8492 4.5558 36 1 6.9864 5.3163 4.2138 37 1 5.3156 4.9364 3.6114 38 1 4.1719 7.9906 5.0522 39 1 3.6143 5.0943 5.7008 40 1 4.5732 5.5392 7.1785 41 1 3.9865 1.2346 4.0315 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_13259648.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:00 Heat of formation + Delta-G solvation = -74.673243 kcal Electronic energy + Delta-G solvation = -27902.664073 eV Core-core repulsion = 23717.583808 eV Total energy + Delta-G solvation = -4185.080265 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.118 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -43.74481 -41.66903 -40.55405 -39.12333 -38.09556 -37.80572 -36.35414 -34.43061 -34.03420 -32.83543 -32.18196 -30.16190 -26.87481 -26.39727 -26.17204 -24.57924 -23.47538 -22.82931 -21.69520 -21.36847 -20.93833 -19.57959 -18.96680 -18.80239 -18.75924 -17.81147 -17.23324 -17.07290 -16.70989 -16.48661 -16.35160 -16.08154 -15.90573 -15.81903 -15.38388 -14.93675 -14.66177 -14.49056 -14.35967 -14.11891 -13.93415 -13.73866 -13.59043 -13.54967 -13.25178 -13.15417 -12.74724 -12.71845 -12.36649 -12.12361 -11.88960 -11.76767 -11.09127 -10.98224 -10.74556 -10.64570 -10.43448 -10.35378 -10.05737 -8.94216 -5.16290 -0.60350 -0.26998 0.71551 1.07309 1.38826 1.54892 1.60676 1.89618 1.94217 1.99591 2.58473 3.03932 3.13411 3.17640 3.31457 3.41430 3.51427 3.57630 3.58805 3.73137 3.75087 3.82561 3.93614 3.95847 4.07942 4.19828 4.31632 4.40486 4.54603 4.58551 4.61550 4.63293 4.72828 4.79000 4.82627 4.87691 4.96745 5.01964 5.08134 5.11791 5.36880 5.40735 5.44359 5.96300 6.39030 6.40968 6.60546 6.63347 7.15617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.035 4.035 3 Si 0.705 3.295 4 C -0.009 4.009 5 C -0.164 4.164 6 C -0.186 4.186 7 C 0.033 3.967 8 C -0.033 4.033 9 C -0.052 4.052 10 C -0.148 4.148 11 C 0.180 3.820 12 O -0.475 6.475 13 C -0.164 4.164 14 C 0.562 3.438 15 O -0.516 6.516 16 N -0.717 5.717 17 C 0.126 3.874 18 H 0.122 0.878 19 C -0.138 4.138 20 C 0.081 3.919 21 H 0.089 0.911 22 O -0.558 6.558 23 C -0.183 4.183 24 C -0.055 4.055 25 O -0.173 6.173 26 H 0.390 0.610 27 H 0.095 0.905 28 H -0.248 1.248 29 H -0.252 1.252 30 H 0.157 0.843 31 H 0.157 0.843 32 H 0.141 0.859 33 H 0.147 0.853 34 H 0.400 0.600 35 H 0.400 0.600 36 H 0.084 0.916 37 H 0.094 0.906 38 H 0.382 0.618 39 H 0.093 0.907 40 H 0.077 0.923 41 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.322 -0.261 -5.647 5.663 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.144 4.144 3 Si 0.604 3.396 4 C -0.058 4.058 5 C -0.183 4.183 6 C -0.205 4.205 7 C -0.016 4.016 8 C -0.034 4.034 9 C -0.070 4.070 10 C -0.166 4.166 11 C 0.134 3.866 12 O -0.286 6.286 13 C -0.168 4.168 14 C 0.350 3.650 15 O -0.392 6.392 16 N -0.369 5.369 17 C 0.021 3.979 18 H 0.140 0.860 19 C -0.176 4.176 20 C 0.021 3.979 21 H 0.107 0.893 22 O -0.364 6.364 23 C -0.222 4.222 24 C -0.074 4.074 25 O -0.071 6.071 26 H 0.240 0.760 27 H 0.113 0.887 28 H -0.172 1.172 29 H -0.176 1.176 30 H 0.174 0.826 31 H 0.175 0.825 32 H 0.159 0.841 33 H 0.165 0.835 34 H 0.259 0.741 35 H 0.236 0.764 36 H 0.103 0.897 37 H 0.113 0.887 38 H 0.230 0.770 39 H 0.111 0.889 40 H 0.096 0.904 41 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 0.405 0.169 -4.132 4.155 hybrid contribution -0.098 -0.592 -0.022 0.601 sum 0.308 -0.423 -4.154 4.187 Atomic orbital electron populations 1.86470 1.16364 1.81988 1.50232 1.23781 0.86158 1.11625 0.92873 0.95218 0.80990 0.76282 0.87139 1.21378 1.00731 0.92643 0.91040 1.21541 1.03271 0.95663 0.97824 1.21864 1.02650 0.98415 0.97539 1.20299 1.03378 0.87584 0.90378 1.17583 1.00158 0.94210 0.91406 1.21130 0.95320 0.98427 0.92109 1.21403 1.00827 0.96821 0.97545 1.18584 0.93117 0.90548 0.84389 1.84752 1.24039 1.92048 1.27795 1.20278 1.05474 0.94841 0.96216 1.18007 0.79651 0.83807 0.83581 1.90826 1.40093 1.84101 1.24138 1.45868 1.57996 1.08940 1.24141 1.22247 0.97803 0.79904 0.97991 0.86015 1.23476 1.02491 0.93886 0.97756 1.23069 0.92656 0.89054 0.93125 0.89324 1.86512 1.67141 1.42089 1.40618 1.24213 0.99778 0.96684 1.01571 1.21277 0.94545 0.96559 0.95003 1.83937 1.58447 1.38222 1.26485 0.76049 0.88698 1.17250 1.17630 0.82563 0.82520 0.84080 0.83498 0.74136 0.76448 0.89708 0.88717 0.77030 0.88863 0.90398 0.85052 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.30 12.86 -35.23 -0.45 -0.15 16 2 C -0.03 0.02 2.97 36.01 0.11 0.13 16 3 Si 0.70 -0.88 32.11 -169.99 -5.46 -6.34 16 4 C -0.01 -0.02 6.24 -35.56 -0.22 -0.24 16 5 C -0.16 -0.31 10.78 -39.80 -0.43 -0.74 16 6 C -0.19 -0.27 10.26 -39.37 -0.40 -0.68 16 7 C 0.03 0.09 7.03 -36.49 -0.26 -0.17 16 8 C -0.03 -0.05 5.87 -105.03 -0.62 -0.67 16 9 C -0.05 0.01 9.54 -39.15 -0.37 -0.36 16 10 C -0.15 0.00 9.96 -39.54 -0.39 -0.39 16 11 C 0.18 0.37 6.72 -38.63 -0.26 0.11 16 12 O -0.47 -1.22 11.55 -40.60 -0.47 -1.69 16 13 C -0.16 -0.41 5.88 -104.89 -0.62 -1.03 16 14 C 0.56 2.04 7.76 -12.45 -0.10 1.95 16 15 O -0.52 -3.38 14.74 -16.65 -0.25 -3.63 16 16 N -0.72 -0.91 5.30 -54.05 -0.29 -1.20 16 17 C 0.13 0.08 4.24 -67.12 -0.28 -0.20 16 18 H 0.12 0.18 7.46 -51.93 -0.39 -0.21 16 19 C -0.14 0.05 7.66 -25.92 -0.20 -0.15 16 20 C 0.08 -0.03 5.21 -25.92 -0.14 -0.17 16 21 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 22 O -0.56 -0.34 13.67 -35.23 -0.48 -0.82 16 23 C -0.18 -0.05 7.71 -25.92 -0.20 -0.25 16 24 C -0.05 -0.09 9.20 -38.78 -0.36 -0.44 16 25 O -0.17 -0.63 8.80 4.58 0.04 -0.59 16 26 H 0.39 -2.36 8.74 45.56 0.40 -1.96 16 27 H 0.10 -0.29 7.96 -51.93 -0.41 -0.70 16 28 H -0.25 -0.63 7.11 56.52 0.40 -0.22 16 29 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 30 H 0.16 0.02 8.06 -52.49 -0.42 -0.40 16 31 H 0.16 -0.19 7.25 -52.48 -0.38 -0.57 16 32 H 0.14 -0.37 6.96 -52.48 -0.37 -0.73 16 33 H 0.15 -0.30 8.06 -52.48 -0.42 -0.72 16 34 H 0.40 -0.53 9.06 45.56 0.41 -0.12 16 35 H 0.40 -0.14 6.75 -40.82 -0.28 -0.42 16 36 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.09 -0.01 8.12 -51.93 -0.42 -0.43 16 38 H 0.38 -1.26 9.12 45.56 0.42 -0.85 16 39 H 0.09 0.09 8.14 -51.93 -0.42 -0.33 16 40 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 41 H 0.13 0.05 6.24 -52.49 -0.33 -0.27 16 LS Contribution 356.62 15.07 5.37 5.37 Total: 0.00 -11.94 356.62 -9.79 -21.74 By element: Atomic # 1 Polarization: -6.31 SS G_CDS: -3.08 Total: -9.39 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -4.74 Total: -3.31 kcal Atomic # 7 Polarization: -0.91 SS G_CDS: -0.29 Total: -1.20 kcal Atomic # 8 Polarization: -5.27 SS G_CDS: -1.61 Total: -6.88 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.46 Total: -6.34 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -11.94 -9.79 -21.74 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13259648.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.937 kcal (2) G-P(sol) polarization free energy of solvation -11.943 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.793 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.736 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.673 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds