Wall clock time and date at job start Sun Mar 7 2021 22:01:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47765 * 2 1 4 4 C 1.50704 * 109.47181 * 239.99586 * 2 1 3 5 5 C 1.34188 * 126.54085 * 104.97897 * 4 2 1 6 6 N 1.36863 * 109.96537 * 180.02562 * 5 4 2 7 7 C 1.37396 * 109.98427 * 359.97438 * 6 5 4 8 8 C 1.39334 * 133.25388 * 180.02562 * 7 6 5 9 9 C 1.36349 * 120.23779 * 179.97438 * 8 7 6 10 10 C 1.40167 * 120.67068 * 0.04093 * 9 8 7 11 11 C 1.47649 * 119.97587 * 179.97438 * 10 9 8 12 12 O 1.21580 * 120.00453 * 179.97438 * 11 10 9 13 13 N 1.34780 * 119.99952 * 0.02562 * 11 10 9 14 14 C 1.46497 * 119.99934 * 179.97438 * 13 11 10 15 15 H 1.08999 * 112.85549 * 23.79860 * 14 13 11 16 16 C 1.53793 * 113.61367 * 154.99621 * 14 13 11 17 17 C 1.53781 * 87.07845 * 89.20011 * 16 14 13 18 18 H 1.09002 * 113.61228 * 139.98223 * 17 16 14 19 19 O 1.42901 * 113.61413 * 270.79882 * 17 16 14 20 20 C 1.53777 * 113.69163 * 252.53129 * 14 13 11 21 21 C 1.39196 * 120.05254 * 0.25232 * 10 9 8 22 22 C 1.39224 * 119.39039 * 359.43959 * 21 10 9 23 23 H 0.96703 * 114.00095 * 300.00635 * 1 2 3 24 24 H 1.09004 * 109.47315 * 119.99983 * 2 1 3 25 25 H 1.48491 * 110.00560 * 178.68216 * 3 2 1 26 26 H 1.48499 * 109.99517 * 299.99938 * 3 2 1 27 27 H 1.08001 * 125.01321 * 0.02562 * 5 4 2 28 28 H 0.97003 * 125.00820 * 179.97438 * 6 5 4 29 29 H 1.07994 * 119.87940 * 359.97281 * 8 7 6 30 30 H 1.08005 * 119.66336 * 180.02562 * 9 8 7 31 31 H 0.97002 * 119.99541 * 359.97438 * 13 11 10 32 32 H 1.09000 * 113.61258 * 334.65147 * 16 14 13 33 33 H 1.08997 * 113.61168 * 203.74968 * 16 14 13 34 34 H 0.96698 * 114.00171 * 178.47521 * 19 17 16 35 35 H 1.08999 * 113.61947 * 156.32790 * 20 14 13 36 36 H 1.08997 * 113.61348 * 25.42005 * 20 14 13 37 37 H 1.07996 * 120.30153 * 179.72348 * 21 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.4603 -0.1388 -2.3231 6 7 2.8019 -1.1007 -3.2349 7 6 2.4951 -2.3457 -2.7413 8 6 2.6343 -3.6353 -3.2500 9 6 2.2315 -4.7107 -2.5148 10 6 1.6725 -4.5371 -1.2412 11 6 1.2410 -5.7124 -0.4585 12 8 0.7565 -5.5625 0.6464 13 7 1.3851 -6.9516 -0.9686 14 6 0.9575 -8.1177 -0.1918 15 1 0.1964 -7.8762 0.5501 16 6 0.6081 -9.3400 -1.0574 17 6 2.0877 -9.7438 -0.9452 18 1 2.2390 -10.8149 -0.8114 19 8 2.9114 -9.1912 -1.9739 20 6 2.1240 -8.9475 0.3699 21 6 1.5186 -3.2573 -0.7160 22 6 1.9350 -2.1580 -1.4619 23 1 -0.3933 0.4418 0.7650 24 1 1.7923 -0.5138 0.8900 25 1 3.5346 1.7702 0.0321 26 1 1.5617 2.4677 -1.2085 27 1 2.5964 0.9235 -2.4624 28 1 3.2017 -0.9288 -4.1018 29 1 3.0626 -3.7837 -4.2302 30 1 2.3440 -5.7063 -2.9181 31 1 1.7720 -7.0712 -1.8501 32 1 0.3011 -9.0836 -2.0713 33 1 -0.0732 -10.0385 -0.5716 34 1 3.8470 -9.4225 -1.8954 35 1 1.8572 -9.5388 1.2458 36 1 3.0407 -8.3743 0.5081 37 1 1.0843 -3.1186 0.2630 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_13287722.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:03 Heat of formation + Delta-G solvation = -19.319225 kcal Electronic energy + Delta-G solvation = -22479.755985 eV Core-core repulsion = 18997.240664 eV Total energy + Delta-G solvation = -3482.515321 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.115 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -42.45775 -41.22949 -39.61960 -37.77184 -37.34762 -36.04484 -33.81797 -33.31787 -30.79940 -30.41159 -26.80410 -26.40639 -25.95298 -24.14857 -23.44659 -21.59150 -20.55841 -20.53355 -19.08245 -18.72095 -18.27675 -17.95181 -17.35915 -16.94047 -16.34058 -15.88399 -15.71419 -15.52551 -15.33680 -15.04989 -14.97257 -14.72907 -14.63666 -14.12350 -13.79265 -13.68723 -13.57144 -13.38170 -12.70953 -12.61742 -12.52108 -12.31867 -11.98584 -11.82289 -11.48566 -10.80618 -10.75649 -10.70516 -10.16952 -9.91145 -9.28956 -8.80623 -5.00569 -0.01280 0.22976 1.30690 1.44705 1.67586 1.95185 1.98339 2.04993 2.22862 2.98911 3.00822 3.46230 3.56312 3.62196 3.67908 3.71769 3.84269 3.94434 3.98902 4.08715 4.17449 4.28211 4.42468 4.51224 4.60412 4.62953 4.68107 4.78913 4.81877 4.89795 4.97200 5.02072 5.06539 5.30411 5.42881 5.52775 5.61917 5.71103 6.00843 6.36842 6.54250 6.73190 6.76519 7.42743 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.039 4.039 3 Si 0.688 3.312 4 C -0.144 4.144 5 C 0.055 3.945 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.134 4.134 9 C -0.064 4.064 10 C -0.168 4.168 11 C 0.566 3.434 12 O -0.541 6.541 13 N -0.704 5.704 14 C 0.126 3.874 15 H 0.105 0.895 16 C -0.142 4.142 17 C 0.077 3.923 18 H 0.071 0.929 19 O -0.554 6.554 20 C -0.186 4.186 21 C 0.010 3.990 22 C -0.102 4.102 23 H 0.380 0.620 24 H 0.072 0.928 25 H -0.256 1.256 26 H -0.253 1.253 27 H 0.170 0.830 28 H 0.421 0.579 29 H 0.128 0.872 30 H 0.131 0.869 31 H 0.406 0.594 32 H 0.083 0.917 33 H 0.110 0.890 34 H 0.385 0.615 35 H 0.099 0.901 36 H 0.077 0.923 37 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.652 0.018 -1.067 2.859 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.150 4.150 3 Si 0.588 3.412 4 C -0.151 4.151 5 C -0.071 4.071 6 N -0.187 5.187 7 C 0.011 3.989 8 C -0.154 4.154 9 C -0.084 4.084 10 C -0.172 4.172 11 C 0.355 3.645 12 O -0.419 6.419 13 N -0.357 5.357 14 C 0.020 3.980 15 H 0.123 0.877 16 C -0.180 4.180 17 C 0.018 3.982 18 H 0.089 0.911 19 O -0.361 6.361 20 C -0.225 4.225 21 C -0.010 4.010 22 C -0.107 4.107 23 H 0.227 0.773 24 H 0.090 0.910 25 H -0.180 1.180 26 H -0.178 1.178 27 H 0.187 0.813 28 H 0.259 0.741 29 H 0.146 0.854 30 H 0.149 0.851 31 H 0.244 0.756 32 H 0.102 0.898 33 H 0.128 0.872 34 H 0.233 0.767 35 H 0.118 0.882 36 H 0.096 0.904 37 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.366 0.708 -1.576 2.929 hybrid contribution 1.066 -0.761 -0.911 1.596 sum 3.432 -0.053 -2.487 4.238 Atomic orbital electron populations 1.86536 1.17433 1.81807 1.49410 1.24005 0.85437 1.09362 0.96188 0.95006 0.80748 0.77599 0.87812 1.19638 1.07900 0.91345 0.96247 1.21570 1.02007 0.94044 0.89497 1.41680 1.54887 1.04139 1.17983 1.18444 0.99898 0.86464 0.94130 1.19663 1.05900 0.88693 1.01176 1.20638 0.96364 0.98461 0.92927 1.19541 1.08148 0.93200 0.96335 1.18180 0.77787 0.82892 0.85678 1.90778 1.44693 1.86130 1.20269 1.45561 1.64089 1.04707 1.21335 1.21731 0.97110 0.84753 0.94399 0.87743 1.23459 0.95205 0.97541 1.01827 1.22801 0.91993 0.95997 0.87451 0.91077 1.86351 1.22919 1.76749 1.50052 1.24147 1.00443 0.99566 0.98330 1.20664 0.92377 0.89095 0.98851 1.18893 1.04610 0.92722 0.94437 0.77272 0.90987 1.18035 1.17779 0.81347 0.74094 0.85368 0.85146 0.75611 0.89848 0.87197 0.76708 0.88232 0.90411 0.84310 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.90 12.86 -35.23 -0.45 -1.36 16 2 C -0.04 -0.04 3.05 36.01 0.11 0.07 16 3 Si 0.69 -0.75 30.80 -169.99 -5.24 -5.98 16 4 C -0.14 -0.48 5.61 -102.68 -0.58 -1.05 16 5 C 0.06 0.09 10.43 -16.73 -0.17 -0.09 16 6 N -0.58 -0.35 6.05 -10.61 -0.06 -0.41 16 7 C 0.12 0.31 7.27 -83.95 -0.61 -0.30 16 8 C -0.13 -0.14 10.00 -39.85 -0.40 -0.54 16 9 C -0.06 -0.09 9.46 -39.54 -0.37 -0.46 16 10 C -0.17 -0.64 5.87 -104.98 -0.62 -1.25 16 11 C 0.57 2.72 7.76 -12.42 -0.10 2.62 16 12 O -0.54 -4.42 15.93 5.30 0.08 -4.34 16 13 N -0.70 -1.43 5.11 -54.02 -0.28 -1.70 16 14 C 0.13 0.15 4.32 -67.12 -0.29 -0.14 16 15 H 0.10 0.27 7.46 -51.93 -0.39 -0.11 16 16 C -0.14 0.12 7.66 -25.91 -0.20 -0.08 16 17 C 0.08 -0.10 5.27 -25.92 -0.14 -0.24 16 18 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 19 O -0.55 0.63 12.33 -35.23 -0.43 0.20 16 20 C -0.19 0.06 7.72 -25.92 -0.20 -0.14 16 21 C 0.01 0.05 9.64 -38.86 -0.37 -0.33 16 22 C -0.10 -0.44 6.34 -105.15 -0.67 -1.11 16 23 H 0.38 -1.33 8.74 45.56 0.40 -0.93 16 24 H 0.07 0.01 7.96 -51.93 -0.41 -0.40 16 25 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 26 H -0.25 -0.33 7.04 56.52 0.40 0.07 16 27 H 0.17 -0.08 6.30 -52.49 -0.33 -0.41 16 28 H 0.42 -1.15 8.96 -40.82 -0.37 -1.51 16 29 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 30 H 0.13 -0.14 6.36 -52.48 -0.33 -0.47 16 31 H 0.41 0.21 5.60 -40.82 -0.23 -0.01 16 32 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 34 H 0.38 -1.75 9.12 45.56 0.42 -1.33 16 35 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 37 H 0.14 0.72 7.64 -52.49 -0.40 0.32 16 LS Contribution 314.56 15.07 4.74 4.74 Total: 0.00 -10.28 314.56 -9.63 -19.91 By element: Atomic # 1 Polarization: -4.63 SS G_CDS: -3.39 Total: -8.02 kcal Atomic # 6 Polarization: 1.57 SS G_CDS: -4.60 Total: -3.03 kcal Atomic # 7 Polarization: -1.78 SS G_CDS: -0.34 Total: -2.12 kcal Atomic # 8 Polarization: -4.69 SS G_CDS: -0.80 Total: -5.50 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.24 Total: -5.98 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -10.28 -9.63 -19.91 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13287722.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.587 kcal (2) G-P(sol) polarization free energy of solvation -10.280 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.693 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.626 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.906 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.319 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds