Wall clock time and date at job start Sun Mar 7 2021 22:01:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47765 * 2 1 4 4 C 1.50704 * 109.47181 * 239.99586 * 2 1 3 5 5 C 1.34188 * 126.54085 * 104.97897 * 4 2 1 6 6 N 1.36863 * 109.96537 * 180.02562 * 5 4 2 7 7 C 1.37396 * 109.98427 * 359.97438 * 6 5 4 8 8 C 1.39334 * 133.25388 * 180.02562 * 7 6 5 9 9 C 1.36349 * 120.23779 * 179.97438 * 8 7 6 10 10 C 1.40167 * 120.67068 * 0.04093 * 9 8 7 11 11 C 1.47649 * 119.97587 * 179.97438 * 10 9 8 12 12 O 1.21580 * 120.00453 * 179.97438 * 11 10 9 13 13 N 1.34780 * 119.99952 * 0.02562 * 11 10 9 14 14 C 1.46497 * 119.99934 * 179.97438 * 13 11 10 15 15 H 1.08999 * 112.85549 * 23.79860 * 14 13 11 16 16 C 1.53793 * 113.61367 * 154.99621 * 14 13 11 17 17 C 1.53781 * 87.07845 * 89.20011 * 16 14 13 18 18 H 1.09002 * 113.61228 * 139.98223 * 17 16 14 19 19 O 1.42901 * 113.61413 * 270.79882 * 17 16 14 20 20 C 1.53777 * 113.69163 * 252.53129 * 14 13 11 21 21 C 1.39196 * 120.05254 * 0.25232 * 10 9 8 22 22 C 1.39224 * 119.39039 * 359.43959 * 21 10 9 23 23 H 0.96703 * 114.00095 * 300.00635 * 1 2 3 24 24 H 1.09004 * 109.47315 * 119.99983 * 2 1 3 25 25 H 1.48491 * 110.00560 * 178.68216 * 3 2 1 26 26 H 1.48499 * 109.99517 * 299.99938 * 3 2 1 27 27 H 1.08001 * 125.01321 * 0.02562 * 5 4 2 28 28 H 0.97003 * 125.00820 * 179.97438 * 6 5 4 29 29 H 1.07994 * 119.87940 * 359.97281 * 8 7 6 30 30 H 1.08005 * 119.66336 * 180.02562 * 9 8 7 31 31 H 0.97002 * 119.99541 * 359.97438 * 13 11 10 32 32 H 1.09000 * 113.61258 * 334.65147 * 16 14 13 33 33 H 1.08997 * 113.61168 * 203.74968 * 16 14 13 34 34 H 0.96698 * 114.00171 * 178.47521 * 19 17 16 35 35 H 1.08999 * 113.61947 * 156.32790 * 20 14 13 36 36 H 1.08997 * 113.61348 * 25.42005 * 20 14 13 37 37 H 1.07996 * 120.30153 * 179.72348 * 21 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.4603 -0.1388 -2.3231 6 7 2.8019 -1.1007 -3.2349 7 6 2.4951 -2.3457 -2.7413 8 6 2.6343 -3.6353 -3.2500 9 6 2.2315 -4.7107 -2.5148 10 6 1.6725 -4.5371 -1.2412 11 6 1.2410 -5.7124 -0.4585 12 8 0.7565 -5.5625 0.6464 13 7 1.3851 -6.9516 -0.9686 14 6 0.9575 -8.1177 -0.1918 15 1 0.1964 -7.8762 0.5501 16 6 0.6081 -9.3400 -1.0574 17 6 2.0877 -9.7438 -0.9452 18 1 2.2390 -10.8149 -0.8114 19 8 2.9114 -9.1912 -1.9739 20 6 2.1240 -8.9475 0.3699 21 6 1.5186 -3.2573 -0.7160 22 6 1.9350 -2.1580 -1.4619 23 1 -0.3933 0.4418 0.7650 24 1 1.7923 -0.5138 0.8900 25 1 3.5346 1.7702 0.0321 26 1 1.5617 2.4677 -1.2085 27 1 2.5964 0.9235 -2.4624 28 1 3.2017 -0.9288 -4.1018 29 1 3.0626 -3.7837 -4.2302 30 1 2.3440 -5.7063 -2.9181 31 1 1.7720 -7.0712 -1.8501 32 1 0.3011 -9.0836 -2.0713 33 1 -0.0732 -10.0385 -0.5716 34 1 3.8470 -9.4225 -1.8954 35 1 1.8572 -9.5388 1.2458 36 1 3.0407 -8.3743 0.5081 37 1 1.0843 -3.1186 0.2630 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_13287722.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:03 Heat of formation + Delta-G solvation = -24.288220 kcal Electronic energy + Delta-G solvation = -22479.971457 eV Core-core repulsion = 18997.240664 eV Total energy + Delta-G solvation = -3482.730793 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.115 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.59379 -41.38164 -39.76549 -37.90755 -37.48409 -36.05079 -34.00032 -33.46473 -30.96352 -30.56222 -26.76496 -26.49614 -26.06575 -24.26815 -23.59642 -21.78690 -20.72092 -20.58464 -19.20783 -18.79161 -18.34509 -17.96078 -17.47431 -17.16094 -16.37628 -16.08630 -15.84883 -15.67016 -15.43508 -15.12170 -15.02023 -14.87861 -14.82641 -14.22754 -13.88933 -13.71956 -13.58249 -13.48359 -12.79272 -12.67227 -12.65017 -12.32678 -12.08871 -11.93405 -11.46313 -11.14926 -10.92655 -10.67630 -10.20856 -10.14143 -9.46404 -8.95266 -4.92687 -0.26004 0.07303 1.31939 1.33593 1.70830 1.75985 1.92017 1.96848 2.04119 2.77971 3.13055 3.46120 3.49255 3.57018 3.63582 3.65769 3.81070 3.85692 3.97244 4.06097 4.15506 4.17404 4.30130 4.42055 4.46817 4.67584 4.72679 4.73876 4.82611 4.87613 4.91118 4.98034 5.03687 5.16101 5.24499 5.34781 5.44153 5.55633 5.84642 6.40548 6.48444 6.86142 6.94414 7.14110 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.570 6.570 2 C -0.061 4.061 3 Si 0.792 3.208 4 C -0.180 4.180 5 C 0.059 3.941 6 N -0.572 5.572 7 C 0.111 3.889 8 C -0.125 4.125 9 C -0.063 4.063 10 C -0.178 4.178 11 C 0.561 3.439 12 O -0.587 6.587 13 N -0.690 5.690 14 C 0.106 3.894 15 H 0.083 0.917 16 C -0.135 4.135 17 C 0.086 3.914 18 H 0.091 0.909 19 O -0.567 6.567 20 C -0.182 4.182 21 C -0.014 4.014 22 C -0.129 4.129 23 H 0.399 0.601 24 H 0.070 0.930 25 H -0.286 1.286 26 H -0.280 1.280 27 H 0.190 0.810 28 H 0.438 0.562 29 H 0.163 0.837 30 H 0.157 0.843 31 H 0.415 0.585 32 H 0.079 0.921 33 H 0.127 0.873 34 H 0.399 0.601 35 H 0.110 0.890 36 H 0.065 0.935 37 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.580 -0.349 -2.704 4.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.379 6.379 2 C -0.169 4.169 3 Si 0.695 3.305 4 C -0.187 4.187 5 C -0.068 4.068 6 N -0.176 5.176 7 C 0.001 3.999 8 C -0.145 4.145 9 C -0.083 4.083 10 C -0.182 4.182 11 C 0.350 3.650 12 O -0.469 6.469 13 N -0.341 5.341 14 C 0.001 3.999 15 H 0.101 0.899 16 C -0.173 4.173 17 C 0.026 3.974 18 H 0.109 0.891 19 O -0.376 6.376 20 C -0.221 4.221 21 C -0.033 4.033 22 C -0.134 4.134 23 H 0.249 0.751 24 H 0.088 0.912 25 H -0.213 1.213 26 H -0.206 1.206 27 H 0.206 0.794 28 H 0.279 0.721 29 H 0.180 0.820 30 H 0.175 0.825 31 H 0.254 0.746 32 H 0.098 0.902 33 H 0.146 0.854 34 H 0.250 0.750 35 H 0.129 0.871 36 H 0.084 0.916 37 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 3.303 0.297 -3.239 4.635 hybrid contribution 0.779 -0.673 -0.418 1.111 sum 4.082 -0.376 -3.656 5.493 Atomic orbital electron populations 1.86477 1.18018 1.82557 1.50870 1.24454 0.85242 1.11727 0.95517 0.93736 0.77273 0.73824 0.85701 1.20117 1.09273 0.91398 0.97901 1.21897 1.00872 0.95008 0.89053 1.41679 1.54180 1.03256 1.18487 1.18689 0.99797 0.87686 0.93716 1.20042 1.04579 0.87671 1.02209 1.20882 0.95620 1.00008 0.91747 1.19600 1.08863 0.92331 0.97446 1.18452 0.77334 0.83961 0.85245 1.90741 1.47051 1.86808 1.22253 1.45486 1.62987 1.04159 1.21515 1.21957 0.97768 0.85206 0.95004 0.89914 1.23492 0.96241 0.96402 1.01156 1.22756 0.91456 0.96713 0.86441 0.89127 1.86310 1.24216 1.77072 1.49993 1.24150 0.98949 0.99344 0.99633 1.20599 0.93925 0.90223 0.98583 1.19176 1.05382 0.93249 0.95556 0.75074 0.91220 1.21299 1.20638 0.79367 0.72089 0.81959 0.82529 0.74563 0.90225 0.85447 0.74982 0.87135 0.91624 0.86464 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -2.89 12.86 -148.98 -1.92 -4.81 16 2 C -0.06 -0.23 3.05 71.24 0.22 -0.02 16 3 Si 0.79 -1.67 30.80 68.60 2.11 0.44 16 4 C -0.18 -1.46 5.61 -18.61 -0.10 -1.57 16 5 C 0.06 0.20 10.43 82.98 0.87 1.06 16 6 N -0.57 -0.38 6.05 -187.48 -1.13 -1.51 16 7 C 0.11 0.59 7.27 39.19 0.28 0.87 16 8 C -0.12 -0.14 10.00 22.09 0.22 0.08 16 9 C -0.06 -0.17 9.46 22.30 0.21 0.04 16 10 C -0.18 -1.73 5.87 -20.09 -0.12 -1.85 16 11 C 0.56 6.84 7.76 86.73 0.67 7.51 16 12 O -0.59 -11.88 15.93 -3.97 -0.06 -11.95 16 13 N -0.69 -3.64 5.11 -443.08 -2.26 -5.90 16 14 C 0.11 0.38 4.32 45.52 0.20 0.58 16 15 H 0.08 0.65 7.46 -2.39 -0.02 0.63 16 16 C -0.14 0.29 7.66 31.12 0.24 0.53 16 17 C 0.09 -0.31 5.27 31.12 0.16 -0.15 16 18 H 0.09 -0.64 8.14 -2.39 -0.02 -0.65 16 19 O -0.57 2.00 12.33 -148.98 -1.84 0.16 16 20 C -0.18 0.08 7.72 31.12 0.24 0.32 16 21 C -0.01 -0.17 9.64 22.74 0.22 0.04 16 22 C -0.13 -1.37 6.34 -20.21 -0.13 -1.50 16 23 H 0.40 -2.27 8.74 -74.06 -0.65 -2.91 16 24 H 0.07 0.21 7.96 -2.38 -0.02 0.19 16 25 H -0.29 -0.80 7.11 99.48 0.71 -0.09 16 26 H -0.28 -0.62 7.04 99.48 0.70 0.08 16 27 H 0.19 -0.28 6.30 -2.91 -0.02 -0.30 16 28 H 0.44 -3.00 8.96 -92.71 -0.83 -3.84 16 29 H 0.16 -0.97 8.06 -2.91 -0.02 -0.99 16 30 H 0.16 -0.53 6.36 -2.91 -0.02 -0.55 16 31 H 0.42 0.48 5.60 -92.71 -0.52 -0.04 16 32 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 33 H 0.13 -0.74 8.14 -2.39 -0.02 -0.76 16 34 H 0.40 -4.18 9.12 -74.06 -0.68 -4.85 16 35 H 0.11 -0.31 8.14 -2.39 -0.02 -0.33 16 36 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 37 H 0.12 1.83 7.64 -2.91 -0.02 1.81 16 Total: 0.00 -26.81 314.56 -3.40 -30.21 By element: Atomic # 1 Polarization: -11.10 SS G_CDS: -1.48 Total: -12.58 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: 3.18 Total: 5.95 kcal Atomic # 7 Polarization: -4.02 SS G_CDS: -3.40 Total: -7.41 kcal Atomic # 8 Polarization: -12.78 SS G_CDS: -3.82 Total: -16.60 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: 2.11 Total: 0.44 kcal Total: -26.81 -3.40 -30.21 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13287722.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.919 kcal (2) G-P(sol) polarization free energy of solvation -26.807 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.887 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.401 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.207 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.288 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds