Wall clock time and date at job start Sun Mar 7 2021 22:01:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50696 * 109.47131 * 240.00209 * 2 1 3 5 5 C 1.38591 * 120.32269 * 299.71909 * 4 2 1 6 6 C 1.38625 * 118.48597 * 179.76701 * 5 4 2 7 7 C 1.39275 * 119.06460 * 0.52664 * 6 5 4 8 8 C 1.48162 * 119.72616 * 179.73077 * 7 6 5 9 9 O 1.21523 * 119.99836 * 359.97438 * 8 7 6 10 10 N 1.34780 * 120.00251 * 179.97438 * 8 7 6 11 11 C 1.46498 * 119.99962 * 179.97438 * 10 8 7 12 12 H 1.08995 * 112.84768 * 23.80729 * 11 10 8 13 13 C 1.53785 * 113.61199 * 155.00297 * 11 10 8 14 14 C 1.53778 * 87.07868 * 139.98102 * 13 11 10 15 15 H 1.08997 * 113.61160 * 89.20362 * 14 13 11 16 16 O 1.42901 * 113.61204 * 220.01835 * 14 13 11 17 17 C 1.53773 * 87.08493 * 334.56674 * 14 13 11 18 18 N 1.32746 * 120.54882 * 359.71092 * 7 6 5 19 19 C 1.31488 * 121.64617 * 0.02562 * 18 7 6 20 20 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 21 21 H 1.08999 * 109.47293 * 119.99810 * 2 1 3 22 22 H 1.48499 * 109.99670 * 298.67876 * 3 2 1 23 23 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 24 24 H 1.08000 * 120.75132 * 359.97438 * 5 4 2 25 25 H 1.08005 * 120.46948 * 180.23915 * 6 5 4 26 26 H 0.96997 * 119.99650 * 0.02562 * 10 8 7 27 27 H 1.08998 * 113.61131 * 254.53282 * 13 11 10 28 28 H 1.09002 * 113.61189 * 25.43235 * 13 11 10 29 29 H 0.96698 * 114.00171 * 180.02562 * 16 14 13 30 30 H 1.09000 * 113.61804 * 270.88824 * 17 14 13 31 31 H 1.08992 * 113.61785 * 139.98281 * 17 14 13 32 32 H 1.08004 * 119.54806 * 180.02562 * 19 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 1.6054 -2.0388 -1.4535 6 6 2.0840 -2.6534 -2.6002 7 6 2.8805 -1.9219 -3.4779 8 6 3.4048 -2.5660 -4.7048 9 8 3.1397 -3.7280 -4.9417 10 7 4.1756 -1.8631 -5.5582 11 6 4.6945 -2.5002 -6.7711 12 1 4.0943 -3.3516 -7.0918 13 6 5.0087 -1.5070 -7.9024 14 6 6.2634 -2.3495 -8.1869 15 1 6.0937 -3.1595 -8.8962 16 8 7.4178 -1.5685 -8.5023 17 6 6.2031 -2.7934 -6.7159 18 7 3.1735 -0.6522 -3.2244 19 6 2.7287 -0.0433 -2.1472 20 1 -0.3934 0.4416 -0.7651 21 1 1.7924 -0.5138 0.8900 22 1 1.5877 2.4585 -1.2243 23 1 1.5613 2.4680 1.2084 24 1 0.9898 -2.5817 -0.7516 25 1 1.8464 -3.6863 -2.8078 26 1 4.3875 -0.9357 -5.3689 27 1 4.2793 -1.5226 -8.7122 28 1 5.2300 -0.4995 -7.5499 29 1 8.2100 -2.0928 -8.6827 30 1 6.7508 -2.1376 -6.0391 31 1 6.4379 -3.8473 -6.5679 32 1 2.9876 0.9909 -1.9747 There are 45 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 45 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_13287726.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:06 Heat of formation + Delta-G solvation = -50.191983 kcal Electronic energy + Delta-G solvation = -17788.217475 eV Core-core repulsion = 14716.353311 eV Total energy + Delta-G solvation = -3071.864164 eV No. of doubly occupied orbitals = 45 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 251.099 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -41.96202 -40.86894 -39.53508 -38.01767 -36.41595 -34.42650 -33.42242 -32.93839 -28.07184 -26.79998 -25.44473 -24.98320 -23.51312 -21.88449 -21.07075 -19.16454 -18.87051 -18.61512 -17.73033 -16.84456 -16.70469 -16.51665 -16.37250 -16.14497 -15.91738 -15.25624 -14.87214 -14.46087 -14.37124 -14.29421 -13.69257 -13.53413 -13.48022 -12.74692 -12.64776 -12.34179 -12.15112 -11.78851 -11.42848 -11.11621 -10.85481 -10.71352 -10.66125 -10.39977 -10.09791 -4.93139 -0.62895 0.06181 1.23389 1.49071 1.59371 1.90279 1.96455 2.62701 2.90126 3.31082 3.32227 3.43020 3.48274 3.59244 3.69402 3.77325 3.79154 3.91366 3.93952 4.11208 4.44538 4.47020 4.58980 4.69748 4.72652 4.84893 4.91496 4.94223 4.96922 5.07265 5.35815 5.42893 6.23464 6.41287 6.58276 6.86978 6.98353 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.077 4.077 3 Si 0.765 3.235 4 C -0.139 4.139 5 C -0.052 4.052 6 C -0.115 4.115 7 C 0.062 3.938 8 C 0.570 3.430 9 O -0.566 6.566 10 N -0.689 5.689 11 C 0.116 3.884 12 H 0.112 0.888 13 C -0.133 4.133 14 C 0.083 3.917 15 H 0.104 0.896 16 O -0.576 6.576 17 C -0.177 4.177 18 N -0.461 5.461 19 C 0.101 3.899 20 H 0.388 0.612 21 H 0.138 0.862 22 H -0.277 1.277 23 H -0.299 1.299 24 H 0.162 0.838 25 H 0.149 0.851 26 H 0.419 0.581 27 H 0.091 0.909 28 H 0.095 0.905 29 H 0.397 0.603 30 H 0.090 0.910 31 H 0.076 0.924 32 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.500 1.828 0.719 3.179 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.187 4.187 3 Si 0.669 3.331 4 C -0.142 4.142 5 C -0.078 4.078 6 C -0.136 4.136 7 C -0.075 4.075 8 C 0.356 3.644 9 O -0.445 6.445 10 N -0.339 5.339 11 C 0.011 3.989 12 H 0.130 0.870 13 C -0.171 4.171 14 C 0.024 3.976 15 H 0.122 0.878 16 O -0.385 6.385 17 C -0.216 4.216 18 N -0.172 5.172 19 C -0.059 4.059 20 H 0.238 0.762 21 H 0.156 0.844 22 H -0.203 1.203 23 H -0.226 1.226 24 H 0.180 0.820 25 H 0.167 0.833 26 H 0.257 0.743 27 H 0.110 0.890 28 H 0.114 0.886 29 H 0.247 0.753 30 H 0.108 0.892 31 H 0.095 0.905 32 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges 2.325 2.434 0.517 3.406 hybrid contribution -1.218 -0.781 0.141 1.454 sum 1.108 1.653 0.658 2.096 Atomic orbital electron populations 1.86613 1.17933 1.80346 1.50272 1.25205 0.83742 1.11933 0.97790 0.94109 0.90125 0.71678 0.77157 1.21701 0.98468 0.95648 0.98343 1.21739 0.96191 0.93973 0.95900 1.22288 0.95427 1.02135 0.93714 1.21072 0.99047 0.91359 0.96065 1.18148 0.78133 0.85346 0.82819 1.90782 1.60365 1.17510 1.75820 1.45756 1.49792 1.16348 1.21994 1.22365 0.94593 0.97485 0.84476 0.87033 1.23449 0.96582 0.99300 0.97788 1.23120 0.86148 0.94101 0.94263 0.87846 1.86474 1.21584 1.38233 1.92180 1.24149 0.95878 1.02744 0.98872 1.67505 1.20817 1.08684 1.20228 1.23024 0.93591 1.00654 0.88593 0.76218 0.84419 1.20288 1.22644 0.82036 0.83278 0.74265 0.89033 0.88607 0.75274 0.89194 0.90497 0.79698 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.99 12.78 -148.98 -1.90 -0.91 16 2 C -0.08 0.40 2.83 71.23 0.20 0.61 16 3 Si 0.76 -4.61 29.82 68.60 2.05 -2.56 16 4 C -0.14 0.46 5.40 -19.69 -0.11 0.35 16 5 C -0.05 0.09 9.77 22.45 0.22 0.31 16 6 C -0.11 -0.27 9.63 22.61 0.22 -0.05 16 7 C 0.06 0.28 6.75 41.89 0.28 0.56 16 8 C 0.57 4.17 7.81 86.88 0.68 4.85 16 9 O -0.57 -7.56 15.92 -3.79 -0.06 -7.62 16 10 N -0.69 -1.79 5.34 -442.59 -2.37 -4.16 16 11 C 0.12 0.11 4.24 45.52 0.19 0.30 16 12 H 0.11 0.34 7.46 -2.39 -0.02 0.32 16 13 C -0.13 0.21 7.66 31.12 0.24 0.45 16 14 C 0.08 -0.18 5.21 31.12 0.16 -0.01 16 15 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 16 O -0.58 0.05 13.67 -148.98 -2.04 -1.98 16 17 C -0.18 0.11 7.71 31.12 0.24 0.35 16 18 N -0.46 -0.88 9.54 -184.91 -1.76 -2.64 16 19 C 0.10 -0.25 9.84 84.83 0.83 0.59 16 20 H 0.39 -2.75 8.70 -74.06 -0.64 -3.39 16 21 H 0.14 -1.03 7.96 -2.39 -0.02 -1.05 16 22 H -0.28 0.64 7.11 99.48 0.71 1.35 16 23 H -0.30 -0.66 7.11 99.48 0.71 0.05 16 24 H 0.16 -0.77 8.06 -2.91 -0.02 -0.79 16 25 H 0.15 0.36 7.64 -2.91 -0.02 0.34 16 26 H 0.42 -0.03 8.06 -92.71 -0.75 -0.78 16 27 H 0.09 -0.28 8.14 -2.39 -0.02 -0.29 16 28 H 0.10 -0.10 8.12 -2.39 -0.02 -0.12 16 29 H 0.40 -3.18 9.12 -74.06 -0.68 -3.85 16 30 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 31 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 32 H 0.19 -1.43 4.89 -2.91 -0.01 -1.44 16 Total: 0.00 -18.08 280.73 -3.77 -21.85 By element: Atomic # 1 Polarization: -9.42 SS G_CDS: -0.85 Total: -10.27 kcal Atomic # 6 Polarization: 5.14 SS G_CDS: 3.16 Total: 8.30 kcal Atomic # 7 Polarization: -2.67 SS G_CDS: -4.13 Total: -6.80 kcal Atomic # 8 Polarization: -6.52 SS G_CDS: -4.00 Total: -10.52 kcal Atomic # 14 Polarization: -4.61 SS G_CDS: 2.05 Total: -2.56 kcal Total: -18.08 -3.77 -21.85 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13287726.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.338 kcal (2) G-P(sol) polarization free energy of solvation -18.085 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.422 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.770 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.854 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.192 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds