Wall clock time and date at job start Sun Mar 7 2021 22:01:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86304 * 109.46849 * 2 1 4 4 C 1.50704 * 109.46960 * 240.00478 * 2 1 3 5 5 C 1.38305 * 120.34681 * 119.99792 * 4 2 1 6 6 N 1.31960 * 121.07657 * 179.69324 * 5 4 2 7 7 C 1.31666 * 121.88364 * 0.28221 * 6 5 4 8 8 C 1.39562 * 120.56341 * 359.97438 * 7 6 5 9 9 C 1.47832 * 120.56076 * 180.02562 * 8 7 6 10 10 O 1.21555 * 120.00360 * 179.97438 * 9 8 7 11 11 N 1.34782 * 119.99899 * 359.97438 * 9 8 7 12 12 C 1.46502 * 119.99829 * 180.02562 * 11 9 8 13 13 H 1.09002 * 112.85153 * 334.66749 * 12 11 9 14 14 C 1.53782 * 113.61366 * 105.86701 * 12 11 9 15 15 C 1.54053 * 86.98569 * 89.15830 * 14 12 11 16 16 H 1.08998 * 113.61826 * 139.97824 * 15 14 12 17 17 O 1.42897 * 113.61211 * 270.88556 * 15 14 12 18 18 C 1.53782 * 113.61362 * 203.47363 * 12 11 9 19 19 C 1.38394 * 120.34656 * 300.22306 * 4 2 1 20 20 H 0.96700 * 113.99846 * 299.99509 * 1 2 3 21 21 H 1.08994 * 109.47347 * 120.00054 * 2 1 3 22 22 H 1.48502 * 109.99852 * 178.68233 * 3 2 1 23 23 H 1.48494 * 110.00357 * 300.00061 * 3 2 1 24 24 H 1.08002 * 119.46432 * 359.97438 * 5 4 2 25 25 H 1.07997 * 119.71408 * 179.97438 * 7 6 5 26 26 H 0.96998 * 120.00094 * 0.02562 * 11 9 8 27 27 H 1.08992 * 113.61093 * 203.66055 * 14 12 11 28 28 H 1.08998 * 113.61048 * 334.56415 * 14 12 11 29 29 H 0.96703 * 114.00035 * 277.48968 * 17 15 14 30 30 H 1.09004 * 113.61060 * 25.42873 * 18 12 11 31 31 H 1.08997 * 113.61755 * 156.33816 * 18 12 11 32 32 H 1.08006 * 120.85743 * 0.04066 * 19 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2306 5 6 2.7269 -0.0450 -2.1456 6 7 3.1795 -0.6547 -3.2249 7 6 2.8939 -1.9136 -3.4838 8 6 2.0928 -2.6533 -2.6127 9 6 1.7726 -4.0670 -2.9032 10 8 1.0742 -4.7018 -2.1372 11 7 2.2551 -4.6519 -4.0175 12 6 1.9373 -6.0527 -4.3057 13 1 1.7064 -6.6276 -3.4088 14 6 0.9076 -6.2313 -5.4339 15 6 2.0999 -6.2455 -6.4094 16 1 1.9992 -6.9766 -7.2115 17 8 2.4681 -4.9482 -6.8821 18 6 2.9567 -6.7379 -5.2310 19 6 1.5976 -2.0338 -1.4591 20 1 -0.3933 0.4416 0.7651 21 1 1.7924 -0.5138 0.8899 22 1 3.5346 1.7704 0.0321 23 1 1.5615 2.4680 -1.2084 24 1 2.9856 0.9890 -1.9718 25 1 3.2829 -2.3778 -4.3780 26 1 2.8127 -4.1455 -4.6286 27 1 0.3697 -7.1781 -5.3881 28 1 0.2471 -5.3737 -5.5619 29 1 1.9327 -4.6331 -7.6232 30 1 3.9493 -6.2889 -5.1955 31 1 2.9779 -7.8229 -5.1300 32 1 0.9745 -2.5761 -0.7633 There are 45 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 45 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_13287814.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:20 Heat of formation + Delta-G solvation = -45.516825 kcal Electronic energy + Delta-G solvation = -18186.571718 eV Core-core repulsion = 15114.910283 eV Total energy + Delta-G solvation = -3071.661434 eV No. of doubly occupied orbitals = 45 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 251.099 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -42.12186 -41.03586 -39.54996 -37.88107 -36.12987 -34.45434 -33.99717 -32.83039 -27.37130 -26.80650 -26.72097 -24.75943 -23.83303 -21.83760 -20.71426 -19.28176 -18.58754 -18.44998 -18.08038 -17.81131 -16.90170 -16.52159 -16.25986 -16.00464 -15.44568 -15.37829 -14.90702 -14.86764 -14.46047 -14.31413 -13.84286 -13.69890 -13.56183 -12.74900 -12.65342 -12.35947 -12.18158 -11.61984 -11.46722 -11.23344 -10.88047 -10.71881 -10.66839 -10.25377 -10.15025 -4.98010 -0.77233 -0.18319 1.21383 1.48591 1.63631 1.82459 1.91828 2.44009 2.87982 3.09598 3.15442 3.37283 3.44286 3.53465 3.53910 3.67602 3.74623 3.81399 3.98621 4.10359 4.14221 4.42134 4.61943 4.68959 4.70371 4.75392 4.79802 4.81883 4.94800 5.00112 5.13582 5.43914 6.27645 6.43435 6.81859 6.84140 6.93249 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.081 4.081 3 Si 0.783 3.217 4 C -0.140 4.140 5 C 0.109 3.891 6 N -0.495 5.495 7 C 0.144 3.856 8 C -0.193 4.193 9 C 0.566 3.434 10 O -0.571 6.571 11 N -0.687 5.687 12 C 0.107 3.893 13 H 0.089 0.911 14 C -0.182 4.182 15 C 0.083 3.917 16 H 0.091 0.909 17 O -0.569 6.569 18 C -0.134 4.134 19 C 0.003 3.997 20 H 0.408 0.592 21 H 0.102 0.898 22 H -0.278 1.278 23 H -0.290 1.290 24 H 0.160 0.840 25 H 0.190 0.810 26 H 0.415 0.585 27 H 0.112 0.888 28 H 0.064 0.936 29 H 0.400 0.600 30 H 0.080 0.920 31 H 0.130 0.870 32 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.408 0.294 -0.031 0.503 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.191 4.191 3 Si 0.687 3.313 4 C -0.142 4.142 5 C -0.047 4.047 6 N -0.203 5.203 7 C -0.015 4.015 8 C -0.198 4.198 9 C 0.353 3.647 10 O -0.451 6.451 11 N -0.338 5.338 12 C 0.002 3.998 13 H 0.107 0.893 14 C -0.221 4.221 15 C 0.023 3.977 16 H 0.109 0.891 17 O -0.377 6.377 18 C -0.172 4.172 19 C -0.023 4.023 20 H 0.260 0.740 21 H 0.120 0.880 22 H -0.205 1.205 23 H -0.218 1.218 24 H 0.177 0.823 25 H 0.206 0.794 26 H 0.254 0.746 27 H 0.131 0.869 28 H 0.083 0.917 29 H 0.250 0.750 30 H 0.099 0.901 31 H 0.148 0.852 32 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 1.455 0.522 -0.593 1.655 hybrid contribution -0.774 -0.726 -0.311 1.105 sum 0.682 -0.204 -0.903 1.150 Atomic orbital electron populations 1.86438 1.16846 1.82636 1.51636 1.24868 0.86311 1.11839 0.96040 0.93881 0.77662 0.74500 0.85261 1.20733 1.00021 0.94851 0.98553 1.22914 0.92982 0.99671 0.89106 1.67732 1.22325 1.10982 1.19225 1.23406 0.91216 0.89048 0.97843 1.21071 1.04248 0.95409 0.99062 1.18122 0.79287 0.86015 0.81306 1.90777 1.39531 1.65423 1.49386 1.45527 1.52051 1.13008 1.23237 1.22009 0.97854 0.81605 0.98333 0.89305 1.24203 0.97589 1.03654 0.96657 1.22848 0.93879 0.85542 0.95392 0.89093 1.86306 1.62382 1.33466 1.55584 1.23492 0.98317 1.02441 0.92900 1.21703 0.92664 0.93367 0.94613 0.74016 0.88009 1.20508 1.21756 0.82301 0.79378 0.74592 0.86950 0.91718 0.74959 0.90092 0.85196 0.83342 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.20 12.75 -148.98 -1.90 -1.70 16 2 C -0.08 0.09 2.83 71.24 0.20 0.29 16 3 Si 0.78 -2.95 29.82 68.60 2.05 -0.90 16 4 C -0.14 -0.77 5.43 -19.81 -0.11 -0.87 16 5 C 0.11 0.73 9.84 84.69 0.83 1.57 16 6 N -0.49 -3.90 10.35 -194.76 -2.01 -5.92 16 7 C 0.14 0.65 10.71 85.04 0.91 1.56 16 8 C -0.19 -1.35 5.89 -19.99 -0.12 -1.47 16 9 C 0.57 4.93 7.78 86.78 0.68 5.61 16 10 O -0.57 -9.12 16.04 -3.89 -0.06 -9.19 16 11 N -0.69 -1.93 5.09 -442.90 -2.26 -4.18 16 12 C 0.11 0.13 4.30 45.52 0.20 0.32 16 13 H 0.09 0.41 7.50 -2.39 -0.02 0.39 16 14 C -0.18 0.34 7.73 31.21 0.24 0.58 16 15 C 0.08 -0.39 5.28 31.21 0.16 -0.22 16 16 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 17 O -0.57 2.24 12.34 -148.98 -1.84 0.40 16 18 C -0.13 0.53 7.65 31.12 0.24 0.76 16 19 C 0.00 0.02 9.31 22.73 0.21 0.23 16 20 H 0.41 -4.61 8.74 -74.06 -0.65 -5.25 16 21 H 0.10 -0.53 7.96 -2.39 -0.02 -0.55 16 22 H -0.28 -0.24 7.11 99.48 0.71 0.47 16 23 H -0.29 -1.02 7.11 99.48 0.71 -0.31 16 24 H 0.16 0.69 4.88 -2.91 -0.01 0.67 16 25 H 0.19 -0.36 6.42 -2.91 -0.02 -0.37 16 26 H 0.42 -0.29 5.70 -92.71 -0.53 -0.82 16 27 H 0.11 -0.48 8.14 -2.39 -0.02 -0.50 16 28 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 29 H 0.40 -4.18 9.12 -74.05 -0.68 -4.86 16 30 H 0.08 -0.23 8.14 -2.38 -0.02 -0.25 16 31 H 0.13 -1.00 8.14 -2.39 -0.02 -1.02 16 32 H 0.15 1.22 7.74 -2.91 -0.02 1.20 16 Total: 0.00 -21.81 276.11 -3.20 -25.02 By element: Atomic # 1 Polarization: -11.26 SS G_CDS: -0.63 Total: -11.89 kcal Atomic # 6 Polarization: 4.91 SS G_CDS: 3.45 Total: 8.36 kcal Atomic # 7 Polarization: -5.83 SS G_CDS: -4.27 Total: -10.10 kcal Atomic # 8 Polarization: -6.68 SS G_CDS: -3.80 Total: -10.48 kcal Atomic # 14 Polarization: -2.95 SS G_CDS: 2.05 Total: -0.90 kcal Total: -21.81 -3.20 -25.02 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13287814.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.498 kcal (2) G-P(sol) polarization free energy of solvation -21.814 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.312 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.205 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.018 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.517 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds