Wall clock time and date at job start Sun Mar 7 2021 22:01:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.36423 * 125.79791 * 2 1 4 4 C 1.47381 * 127.19046 * 359.95405 * 3 2 1 5 5 O 1.21607 * 119.99983 * 0.02562 * 4 3 2 6 6 N 1.34778 * 119.99684 * 180.02562 * 4 3 2 7 7 C 1.46495 * 119.99780 * 180.02562 * 6 4 3 8 8 H 1.08996 * 112.85470 * 23.80192 * 7 6 4 9 9 C 1.53786 * 113.61166 * 154.99885 * 7 6 4 10 10 C 1.53789 * 87.07808 * 139.98029 * 9 7 6 11 11 H 1.08991 * 113.61323 * 89.11832 * 10 9 7 12 12 O 1.42900 * 113.60970 * 220.01874 * 10 9 7 13 13 C 1.53782 * 87.08009 * 334.56418 * 10 9 7 14 14 C 1.47017 * 105.61251 * 179.97438 * 3 2 1 15 15 C 1.34178 * 105.95666 * 359.97438 * 14 3 2 16 16 C 1.50700 * 125.43754 * 180.02562 * 15 14 3 17 17 O 1.42901 * 109.47028 * 300.00427 * 16 15 14 18 18 Si 1.86304 * 109.46988 * 180.02562 * 16 15 14 19 19 O 1.33644 * 125.80477 * 179.68884 * 2 1 3 20 20 H 1.08999 * 109.47015 * 90.00363 * 1 2 3 21 21 H 1.09000 * 109.46646 * 209.99516 * 1 2 3 22 22 H 1.09000 * 109.47248 * 330.00233 * 1 2 3 23 23 H 0.97001 * 119.99983 * 0.02562 * 6 4 3 24 24 H 1.08996 * 113.61316 * 254.51965 * 9 7 6 25 25 H 1.08992 * 113.61733 * 25.34923 * 9 7 6 26 26 H 0.96708 * 113.99928 * 180.02562 * 12 10 9 27 27 H 1.08993 * 113.61355 * 270.88457 * 13 10 9 28 28 H 1.09001 * 113.60987 * 139.98157 * 13 10 9 29 29 H 1.08002 * 127.02243 * 180.02562 * 14 3 2 30 30 H 1.08997 * 109.47175 * 60.00689 * 16 15 14 31 31 H 0.96698 * 114.00161 * 299.99558 * 17 16 15 32 32 H 1.48500 * 109.99949 * 58.68281 * 18 16 15 33 33 H 1.48498 * 109.99866 * 180.02562 * 18 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3050 1.1065 0.0000 4 6 1.8739 2.5158 -0.0009 5 8 0.6889 2.7891 -0.0014 6 7 2.7929 3.5017 -0.0013 7 6 2.3643 4.9025 -0.0017 8 1 1.3618 5.0386 0.4037 9 6 3.4054 5.8653 0.5935 10 6 3.0278 6.8437 -0.5314 11 1 2.2064 7.5114 -0.2718 12 8 4.1480 7.5317 -1.0915 13 6 2.5893 5.6151 -1.3458 14 6 3.6849 0.5992 0.0006 15 6 3.5860 -0.7389 0.0015 16 6 4.7460 -1.7009 0.0030 17 8 5.5435 -1.4871 -1.1634 18 14 4.1028 -3.4493 0.0030 19 8 2.2889 -1.0839 0.0059 20 1 -0.3633 -0.0001 -1.0277 21 1 -0.3632 -0.8901 0.5138 22 1 -0.3634 0.8900 0.5138 23 1 3.7381 3.2836 -0.0014 24 1 3.1481 6.2252 1.5896 25 1 4.4289 5.4966 0.5278 26 1 3.9169 8.1488 -1.7993 27 1 3.3900 5.1786 -1.9427 28 1 1.6733 5.7729 -1.9150 29 1 4.5928 1.1841 0.0012 30 1 5.3530 -1.5367 0.8933 31 1 5.0669 -1.6162 -1.9948 32 1 3.2479 -3.6760 -1.1898 33 1 5.2371 -4.4077 0.0051 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_13308374.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:23 Heat of formation + Delta-G solvation = -75.315668 kcal Electronic energy + Delta-G solvation = -18695.267968 eV Core-core repulsion = 15497.284218 eV Total energy + Delta-G solvation = -3197.983750 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 254.103 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -43.79308 -41.12586 -39.54295 -38.17771 -36.39785 -34.50762 -33.67183 -33.02767 -29.44492 -26.81097 -26.47381 -25.16634 -23.76760 -22.10107 -21.39788 -20.33849 -18.98490 -18.75938 -17.99977 -17.74581 -16.94330 -16.85155 -16.23101 -16.07259 -15.82973 -15.72140 -14.97713 -14.65709 -14.26792 -14.20994 -13.96646 -13.83455 -13.63739 -13.53352 -12.95291 -12.84807 -12.72038 -12.32474 -12.18927 -11.75310 -11.20999 -10.98649 -10.83426 -10.74843 -10.14663 -9.60141 -4.94584 0.19721 0.79123 1.16883 1.40717 1.68991 1.90610 2.09481 2.18722 3.14762 3.30721 3.36318 3.42386 3.60293 3.71960 3.75547 3.79253 3.93393 4.10001 4.37504 4.42721 4.49244 4.58278 4.64483 4.67671 4.71505 4.77681 4.90810 4.93151 5.06706 5.15178 5.19947 5.46430 5.86300 6.31938 6.43036 6.84252 7.09760 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.087 3.913 3 C -0.271 4.271 4 C 0.590 3.410 5 O -0.573 6.573 6 N -0.702 5.702 7 C 0.122 3.878 8 H 0.111 0.889 9 C -0.133 4.133 10 C 0.082 3.918 11 H 0.103 0.897 12 O -0.577 6.577 13 C -0.179 4.179 14 C -0.149 4.149 15 C -0.057 4.057 16 C -0.033 4.033 17 O -0.534 6.534 18 Si 0.772 3.228 19 O -0.171 6.171 20 H 0.096 0.904 21 H 0.102 0.898 22 H 0.098 0.902 23 H 0.412 0.588 24 H 0.091 0.909 25 H 0.095 0.905 26 H 0.397 0.603 27 H 0.087 0.913 28 H 0.074 0.926 29 H 0.175 0.825 30 H 0.158 0.842 31 H 0.390 0.610 32 H -0.295 1.295 33 H -0.282 1.282 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.334 0.103 1.322 1.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.033 3.967 3 C -0.276 4.276 4 C 0.379 3.621 5 O -0.454 6.454 6 N -0.352 5.352 7 C 0.017 3.983 8 H 0.129 0.871 9 C -0.171 4.171 10 C 0.022 3.978 11 H 0.121 0.879 12 O -0.385 6.385 13 C -0.218 4.218 14 C -0.168 4.168 15 C -0.105 4.105 16 C -0.143 4.143 17 O -0.342 6.342 18 Si 0.676 3.324 19 O -0.068 6.068 20 H 0.114 0.886 21 H 0.121 0.879 22 H 0.116 0.884 23 H 0.249 0.751 24 H 0.110 0.890 25 H 0.114 0.886 26 H 0.247 0.753 27 H 0.106 0.894 28 H 0.092 0.908 29 H 0.193 0.807 30 H 0.175 0.825 31 H 0.240 0.760 32 H -0.222 1.222 33 H -0.208 1.208 Dipole moment (debyes) X Y Z Total from point charges 0.182 -0.975 1.785 2.042 hybrid contribution 0.353 0.899 -1.702 1.957 sum 0.535 -0.075 0.083 0.546 Atomic orbital electron populations 1.20722 0.82465 1.05802 1.05107 1.23255 0.94824 0.82950 0.95620 1.21215 0.94276 0.93478 1.18583 1.17405 0.85253 0.84462 0.74948 1.90745 1.17819 1.84543 1.52333 1.45650 1.09971 1.05290 1.74308 1.22252 0.99686 0.78919 0.97477 0.87150 1.23444 0.99867 0.94718 0.99049 1.23139 0.89226 0.91345 0.94050 0.87932 1.86474 1.34186 1.60997 1.56873 1.24159 1.02396 0.97744 0.97544 1.22782 0.96375 0.93725 1.03914 1.22842 0.82889 0.95887 1.08886 1.24518 0.90051 1.07098 0.92597 1.86641 1.39370 1.91731 1.16460 0.93505 0.78855 0.72077 0.88004 1.83677 1.16756 1.34959 1.71397 0.88572 0.87914 0.88356 0.75117 0.89037 0.88628 0.75316 0.89415 0.90754 0.80738 0.82520 0.76002 1.22153 1.20829 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.02 9.89 71.24 0.70 0.68 16 2 C 0.09 0.32 7.37 25.26 0.19 0.51 16 3 C -0.27 -1.20 6.31 -18.99 -0.12 -1.32 16 4 C 0.59 3.90 7.81 86.65 0.68 4.58 16 5 O -0.57 -7.07 14.44 -4.05 -0.06 -7.13 16 6 N -0.70 -0.88 5.35 -443.35 -2.37 -3.26 16 7 C 0.12 0.05 4.24 45.52 0.19 0.24 16 8 H 0.11 0.31 7.46 -2.39 -0.02 0.29 16 9 C -0.13 0.28 7.66 31.13 0.24 0.52 16 10 C 0.08 -0.18 5.21 31.12 0.16 -0.01 16 11 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 12 O -0.58 -0.01 13.67 -148.98 -2.04 -2.04 16 13 C -0.18 0.11 7.71 31.12 0.24 0.35 16 14 C -0.15 -0.08 10.46 23.65 0.25 0.17 16 15 C -0.06 -0.01 6.20 24.76 0.15 0.14 16 16 C -0.03 0.10 2.98 71.24 0.21 0.31 16 17 O -0.53 0.39 12.86 -148.98 -1.92 -1.52 16 18 Si 0.77 -1.92 32.08 68.60 2.20 0.29 16 19 O -0.17 -0.39 8.89 4.54 0.04 -0.35 16 20 H 0.10 -0.09 8.14 -2.39 -0.02 -0.11 16 21 H 0.10 -0.43 8.14 -2.39 -0.02 -0.45 16 22 H 0.10 0.32 6.49 -2.39 -0.02 0.31 16 23 H 0.41 -1.22 7.90 -92.71 -0.73 -1.95 16 24 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 25 H 0.10 -0.18 8.12 -2.39 -0.02 -0.20 16 26 H 0.40 -3.08 9.12 -74.05 -0.68 -3.75 16 27 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 28 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 29 H 0.18 -0.66 7.74 -2.91 -0.02 -0.68 16 30 H 0.16 -1.08 7.96 -2.39 -0.02 -1.10 16 31 H 0.39 -2.13 8.70 -74.06 -0.64 -2.77 16 32 H -0.29 -1.16 7.11 99.48 0.71 -0.45 16 33 H -0.28 -0.87 7.11 99.48 0.71 -0.16 16 Total: 0.00 -17.68 289.70 -2.10 -19.78 By element: Atomic # 1 Polarization: -11.07 SS G_CDS: -0.85 Total: -11.92 kcal Atomic # 6 Polarization: 3.27 SS G_CDS: 2.89 Total: 6.16 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: -2.37 Total: -3.26 kcal Atomic # 8 Polarization: -7.07 SS G_CDS: -3.97 Total: -11.04 kcal Atomic # 14 Polarization: -1.92 SS G_CDS: 2.20 Total: 0.29 kcal Total: -17.68 -2.10 -19.78 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13308374.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.537 kcal (2) G-P(sol) polarization free energy of solvation -17.682 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.219 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.097 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.779 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.316 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds