Wall clock time and date at job start Sun Mar 7 2021 22:01:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.38513 * 119.80688 * 119.72707 * 4 2 1 6 6 C 1.37820 * 120.30331 * 179.76477 * 5 4 2 7 7 C 1.39675 * 119.90854 * 0.48692 * 6 5 4 8 8 C 1.47537 * 120.19315 * 179.78593 * 7 6 5 9 9 O 1.21584 * 120.00080 * 179.97438 * 8 7 6 10 10 N 1.34779 * 119.99802 * 359.97438 * 8 7 6 11 11 C 1.46504 * 119.99597 * 179.97438 * 10 8 7 12 12 H 1.08996 * 112.85162 * 23.80377 * 11 10 8 13 13 C 1.53782 * 113.61083 * 154.99940 * 11 10 8 14 14 C 1.53786 * 87.07892 * 139.98258 * 13 11 10 15 15 H 1.08994 * 113.61494 * 89.11486 * 14 13 11 16 16 O 1.42906 * 113.61341 * 220.02221 * 14 13 11 17 17 C 1.53782 * 113.61292 * 252.49967 * 11 10 8 18 18 C 1.40180 * 119.61595 * 359.76839 * 7 6 5 19 19 O 1.35645 * 120.14989 * 179.97438 * 18 7 6 20 20 C 1.38096 * 119.80837 * 299.99989 * 4 2 1 21 21 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 22 22 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 23 23 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 24 24 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 25 25 H 1.08002 * 119.84439 * 0.02562 * 5 4 2 26 26 H 1.08005 * 120.05092 * 180.25470 * 6 5 4 27 27 H 0.96995 * 120.00467 * 359.97438 * 10 8 7 28 28 H 1.08989 * 113.61644 * 254.52820 * 13 11 10 29 29 H 1.08998 * 113.61658 * 25.35318 * 13 11 10 30 30 H 0.96702 * 114.00091 * 180.02562 * 16 14 13 31 31 H 1.09008 * 113.61248 * 334.56561 * 17 11 10 32 32 H 1.08996 * 113.61657 * 105.46977 * 17 11 10 33 33 H 0.96698 * 114.00126 * 270.02355 * 19 18 7 34 34 H 1.07999 * 119.95533 * 359.97438 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7227 -0.0318 -2.1424 6 6 3.1917 -0.6730 -3.2687 7 6 2.8598 -2.0102 -3.4979 8 6 3.3546 -2.7013 -4.7038 9 8 3.0639 -3.8655 -4.8996 10 7 4.1287 -2.0420 -5.5885 11 6 4.6204 -2.7284 -6.7857 12 1 4.0000 -3.5778 -7.0715 13 6 4.9403 -1.7790 -7.9524 14 6 6.1748 -2.6551 -8.2235 15 1 5.9805 -3.4852 -8.9026 16 8 7.3404 -1.9079 -8.5774 17 6 6.1235 -3.0496 -6.7380 18 6 2.0543 -2.6920 -2.5752 19 8 1.7249 -3.9907 -2.7873 20 6 1.5953 -2.0326 -1.4450 21 1 -0.3934 0.4417 -0.7651 22 1 1.7923 -0.5139 0.8900 23 1 1.5879 2.4585 -1.2243 24 1 1.5615 2.4679 1.2085 25 1 2.9769 1.0033 -1.9680 26 1 3.8119 -0.1411 -3.9750 27 1 4.3603 -1.1131 -5.4325 28 1 4.2012 -1.8065 -8.7529 29 1 5.1840 -0.7649 -7.6358 30 1 8.1201 -2.4535 -8.7495 31 1 6.6921 -2.3831 -6.0893 32 1 6.3395 -4.1027 -6.5581 33 1 0.9082 -4.1122 -3.2905 34 1 0.9745 -2.5539 -0.7313 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_13422076.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:30 Heat of formation + Delta-G solvation = -102.300903 kcal Electronic energy + Delta-G solvation = -19882.997962 eV Core-core repulsion = 16555.617904 eV Total energy + Delta-G solvation = -3327.380058 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.103 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -41.76467 -40.63252 -39.38138 -38.45784 -37.24772 -36.33042 -34.25189 -32.44384 -31.12295 -27.71871 -26.78321 -25.27326 -23.90967 -23.22088 -21.64755 -21.03281 -19.42546 -18.74491 -18.67447 -18.28021 -17.28115 -16.75359 -16.44149 -16.37881 -16.11786 -15.93238 -15.81785 -15.27232 -14.92378 -14.70339 -14.38654 -13.76678 -13.65876 -13.50401 -13.22721 -12.99576 -12.69481 -12.39510 -12.32303 -12.15829 -11.72628 -11.60558 -11.02893 -10.79405 -10.65695 -10.24320 -10.00669 -9.79532 -4.89909 -0.43594 0.13534 1.27527 1.61921 1.67469 1.98796 2.01182 2.54876 3.08930 3.32200 3.38507 3.40756 3.49639 3.62710 3.70147 3.76794 3.82011 3.95019 4.07735 4.26210 4.40762 4.48023 4.63893 4.70563 4.73746 4.75632 4.92988 4.95306 5.01881 5.07102 5.15084 5.22796 5.47089 5.58635 6.43792 6.45792 6.69132 6.85959 7.12316 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.093 4.093 3 Si 0.778 3.222 4 C -0.070 4.070 5 C -0.131 4.131 6 C -0.053 4.053 7 C -0.181 4.181 8 C 0.556 3.444 9 O -0.564 6.564 10 N -0.702 5.702 11 C 0.120 3.880 12 H 0.104 0.896 13 C -0.130 4.130 14 C 0.081 3.919 15 H 0.099 0.901 16 O -0.576 6.576 17 C -0.180 4.180 18 C 0.153 3.847 19 O -0.498 6.498 20 C -0.140 4.140 21 H 0.388 0.612 22 H 0.126 0.874 23 H -0.271 1.271 24 H -0.306 1.306 25 H 0.164 0.836 26 H 0.167 0.833 27 H 0.415 0.585 28 H 0.089 0.911 29 H 0.102 0.898 30 H 0.396 0.604 31 H 0.093 0.907 32 H 0.069 0.931 33 H 0.407 0.593 34 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.029 4.999 -2.032 6.188 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.201 4.201 3 Si 0.682 3.318 4 C -0.070 4.070 5 C -0.148 4.148 6 C -0.072 4.072 7 C -0.185 4.185 8 C 0.345 3.655 9 O -0.444 6.444 10 N -0.354 5.354 11 C 0.015 3.985 12 H 0.122 0.878 13 C -0.168 4.168 14 C 0.021 3.979 15 H 0.117 0.883 16 O -0.384 6.384 17 C -0.219 4.219 18 C 0.106 3.894 19 O -0.311 6.311 20 C -0.159 4.159 21 H 0.238 0.762 22 H 0.144 0.856 23 H -0.197 1.197 24 H -0.235 1.235 25 H 0.181 0.819 26 H 0.185 0.815 27 H 0.253 0.747 28 H 0.108 0.892 29 H 0.120 0.880 30 H 0.247 0.753 31 H 0.112 0.888 32 H 0.088 0.912 33 H 0.267 0.733 34 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.801 5.051 -1.277 5.915 hybrid contribution -1.232 -0.675 -0.563 1.513 sum 1.569 4.375 -1.839 4.999 Atomic orbital electron populations 1.86600 1.18233 1.80477 1.50272 1.25463 0.83729 1.12674 0.98255 0.93945 0.90039 0.70917 0.76871 1.20506 0.96315 0.93621 0.96590 1.21242 0.98382 1.01282 0.93913 1.21491 0.96836 0.91350 0.97477 1.20456 1.05515 0.96069 0.96423 1.18371 0.78148 0.85933 0.83079 1.90801 1.59028 1.17767 1.76777 1.45736 1.51287 1.16067 1.22331 1.22216 0.94529 0.96860 0.84872 0.87762 1.23436 0.96403 0.99577 0.97385 1.23125 0.86206 0.94709 0.93832 0.88350 1.86466 1.21879 1.38539 1.91482 1.24175 0.96423 1.02534 0.98756 1.18752 0.94441 0.83450 0.92726 1.84713 1.48229 1.20713 1.77457 1.21335 1.01744 0.94741 0.98039 0.76231 0.85619 1.19686 1.23494 0.81917 0.81535 0.74680 0.89197 0.88007 0.75337 0.88837 0.91224 0.73347 0.84765 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.19 12.76 -148.98 -1.90 -2.10 16 2 C -0.09 0.29 2.81 71.24 0.20 0.49 16 3 Si 0.78 -4.41 29.77 68.60 2.04 -2.37 16 4 C -0.07 0.16 5.39 -19.83 -0.11 0.05 16 5 C -0.13 0.77 8.65 22.24 0.19 0.96 16 6 C -0.05 0.27 9.54 22.52 0.21 0.48 16 7 C -0.18 -0.43 5.89 -20.01 -0.12 -0.55 16 8 C 0.56 3.16 7.76 86.70 0.67 3.84 16 9 O -0.56 -7.97 14.76 16.93 0.25 -7.72 16 10 N -0.70 0.82 5.31 -443.19 -2.35 -1.53 16 11 C 0.12 -0.08 4.24 45.52 0.19 0.11 16 12 H 0.10 0.30 7.46 -2.39 -0.02 0.28 16 13 C -0.13 0.49 7.66 31.12 0.24 0.73 16 14 C 0.08 -0.25 5.21 31.13 0.16 -0.09 16 15 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 16 O -0.58 0.73 13.67 -148.98 -2.04 -1.30 16 17 C -0.18 0.28 7.71 31.12 0.24 0.52 16 18 C 0.15 0.76 6.72 22.85 0.15 0.92 16 19 O -0.50 -4.00 11.58 -68.68 -0.80 -4.80 16 20 C -0.14 -0.28 9.53 22.34 0.21 -0.06 16 21 H 0.39 -2.25 8.70 -74.06 -0.64 -2.89 16 22 H 0.13 -0.49 7.96 -2.38 -0.02 -0.51 16 23 H -0.27 0.90 7.10 99.48 0.71 1.61 16 24 H -0.31 -0.97 7.11 99.48 0.71 -0.27 16 25 H 0.16 -1.86 4.85 -2.91 -0.01 -1.88 16 26 H 0.17 -2.05 6.40 -2.91 -0.02 -2.06 16 27 H 0.41 -3.13 6.76 -92.71 -0.63 -3.75 16 28 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 29 H 0.10 -0.49 8.12 -2.39 -0.02 -0.51 16 30 H 0.40 -3.45 9.12 -74.06 -0.68 -4.13 16 31 H 0.09 -0.13 8.14 -2.38 -0.02 -0.15 16 32 H 0.07 -0.01 8.14 -2.39 -0.02 -0.02 16 33 H 0.41 0.44 9.06 -74.06 -0.67 -0.23 16 34 H 0.13 0.33 8.06 -2.91 -0.02 0.30 16 Total: 0.00 -23.68 292.22 -3.93 -27.61 By element: Atomic # 1 Polarization: -13.80 SS G_CDS: -1.39 Total: -15.20 kcal Atomic # 6 Polarization: 5.15 SS G_CDS: 2.26 Total: 7.41 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: -2.35 Total: -1.53 kcal Atomic # 8 Polarization: -11.44 SS G_CDS: -4.48 Total: -15.92 kcal Atomic # 14 Polarization: -4.41 SS G_CDS: 2.04 Total: -2.37 kcal Total: -23.68 -3.93 -27.61 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13422076.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.694 kcal (2) G-P(sol) polarization free energy of solvation -23.678 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.371 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.930 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.607 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.301 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds