Wall clock time and date at job start Sun Mar 7 2021 22:01:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.37786 * 119.84993 * 2 1 4 4 C 1.39707 * 119.90586 * 179.72413 * 3 2 1 5 5 C 1.47533 * 120.19329 * 180.25336 * 4 3 2 6 6 O 1.21595 * 119.99833 * 180.25146 * 5 4 3 7 7 N 1.34768 * 119.99939 * 0.24478 * 5 4 3 8 8 C 1.46506 * 120.00375 * 180.02562 * 7 5 4 9 9 H 1.09008 * 112.84133 * 23.80580 * 8 7 5 10 10 C 1.53774 * 113.61548 * 155.00027 * 8 7 5 11 11 C 1.53789 * 87.08024 * 139.98432 * 10 8 7 12 12 H 1.08998 * 113.60905 * 89.11670 * 11 10 8 13 13 O 1.42897 * 113.61555 * 219.93706 * 11 10 8 14 14 C 1.53774 * 113.61540 * 252.50463 * 8 7 5 15 15 C 1.40149 * 119.61659 * 0.49945 * 4 3 2 16 16 O 1.35655 * 120.15107 * 179.77654 * 15 4 3 17 17 C 1.38710 * 119.69595 * 359.49590 * 15 4 3 18 18 C 1.50698 * 119.95410 * 180.22681 * 17 15 4 19 19 O 1.42898 * 109.47580 * 285.00465 * 18 17 15 20 20 Si 1.86296 * 109.47007 * 165.00190 * 18 17 15 21 21 C 1.38047 * 120.08716 * 0.25919 * 17 15 4 22 22 H 1.09000 * 109.47037 * 270.02544 * 1 2 3 23 23 H 1.09006 * 109.46884 * 30.02482 * 1 2 3 24 24 H 1.08999 * 109.46946 * 150.02253 * 1 2 3 25 25 H 1.07997 * 120.04781 * 359.97438 * 3 2 1 26 26 H 0.97004 * 120.00113 * 0.02562 * 7 5 4 27 27 H 1.08997 * 113.61757 * 254.53153 * 10 8 7 28 28 H 1.09001 * 113.61333 * 25.35651 * 10 8 7 29 29 H 0.96699 * 113.99753 * 180.02562 * 13 11 10 30 30 H 1.08992 * 113.61838 * 334.56026 * 14 8 7 31 31 H 1.09006 * 113.61909 * 105.46996 * 14 8 7 32 32 H 0.96701 * 113.99698 * 269.72682 * 16 15 4 33 33 H 1.08998 * 109.46904 * 45.00596 * 18 17 15 34 34 H 0.96700 * 114.00008 * 300.00251 * 19 18 17 35 35 H 1.48500 * 110.00351 * 180.02562 * 20 18 17 36 36 H 1.48501 * 110.00157 * 301.32226 * 20 18 17 37 37 H 1.08001 * 119.80642 * 179.97438 * 21 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5899 1.1964 0.0058 5 6 4.3306 2.4723 0.0115 6 8 5.5465 2.4694 0.0120 7 7 3.6595 3.6410 0.0161 8 6 4.3950 4.9081 0.0211 9 1 5.4023 4.8143 -0.3846 10 6 3.5999 6.0843 -0.5698 11 6 4.1897 6.9473 0.5582 12 1 5.1414 7.4119 0.3003 13 8 3.2555 7.8709 1.1205 14 6 4.3377 5.6482 1.3678 15 6 4.2837 -0.0213 0.0010 16 8 5.6402 -0.0326 0.0020 17 6 3.5770 -1.2148 0.0011 18 6 4.3172 -2.5275 0.0012 19 8 4.8549 -2.7713 -1.3002 20 14 3.1443 -3.9017 0.4558 21 6 2.1966 -1.2018 0.0006 22 1 -0.3633 0.0005 1.0277 23 1 -0.3633 0.8898 -0.5143 24 1 -0.3633 -0.8902 -0.5135 25 1 1.6512 2.1294 -0.0004 26 1 2.6895 3.6434 0.0160 27 1 3.9321 6.3798 -1.5649 28 1 2.5192 5.9573 -0.5046 29 1 3.6208 8.4168 1.8302 30 1 3.4589 5.4028 1.9640 31 1 5.2657 5.5918 1.9369 32 1 6.0341 -0.0362 -0.8811 33 1 5.1286 -2.4871 0.7278 34 1 4.1879 -2.8198 -1.9986 35 1 3.8622 -5.2016 0.4600 36 1 2.5540 -3.6437 1.7938 37 1 1.6509 -2.1338 0.0002 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_13422088.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:33 Heat of formation + Delta-G solvation = -109.183662 kcal Electronic energy + Delta-G solvation = -21990.936387 eV Core-core repulsion = 18507.720251 eV Total energy + Delta-G solvation = -3483.216136 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -41.85903 -40.74402 -39.40050 -38.06895 -37.64319 -36.36867 -34.31973 -33.04890 -32.43262 -27.53771 -26.82598 -26.80499 -26.19137 -24.06040 -22.05032 -21.60898 -20.88646 -19.61499 -18.81948 -18.38627 -17.86241 -17.35897 -16.92587 -16.60159 -16.29054 -16.11189 -15.98245 -15.54225 -15.14170 -14.92965 -14.61168 -14.38644 -14.24306 -13.70792 -13.65733 -13.54862 -13.28626 -12.87081 -12.76993 -12.55979 -12.34608 -12.19710 -12.12016 -11.79790 -11.69845 -11.06822 -10.82835 -10.44339 -10.29275 -10.03326 -9.51950 -5.06740 -0.37648 0.04558 1.23788 1.62324 1.66117 1.92855 2.00922 2.51451 3.16381 3.28984 3.36637 3.41910 3.51819 3.58747 3.65057 3.76095 3.79391 3.90783 4.11483 4.16991 4.32982 4.45546 4.53797 4.60009 4.66267 4.70498 4.81359 4.89268 4.91776 4.92436 4.96314 5.05382 5.16880 5.27046 5.41985 5.43436 5.67687 6.39564 6.66831 6.74814 6.82904 7.08704 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.093 4.093 3 C -0.063 4.063 4 C -0.183 4.183 5 C 0.556 3.444 6 O -0.565 6.565 7 N -0.702 5.702 8 C 0.120 3.880 9 H 0.104 0.896 10 C -0.129 4.129 11 C 0.082 3.918 12 H 0.100 0.900 13 O -0.575 6.575 14 C -0.181 4.181 15 C 0.160 3.840 16 O -0.495 6.495 17 C -0.159 4.159 18 C -0.075 4.075 19 O -0.553 6.553 20 Si 0.796 3.204 21 C -0.069 4.069 22 H 0.080 0.920 23 H 0.082 0.918 24 H 0.089 0.911 25 H 0.158 0.842 26 H 0.414 0.586 27 H 0.091 0.909 28 H 0.101 0.899 29 H 0.397 0.603 30 H 0.091 0.909 31 H 0.068 0.932 32 H 0.403 0.597 33 H 0.091 0.909 34 H 0.396 0.604 35 H -0.299 1.299 36 H -0.285 1.285 37 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.604 1.048 -2.857 9.127 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.093 4.093 3 C -0.081 4.081 4 C -0.187 4.187 5 C 0.344 3.656 6 O -0.445 6.445 7 N -0.354 5.354 8 C 0.015 3.985 9 H 0.122 0.878 10 C -0.167 4.167 11 C 0.023 3.977 12 H 0.118 0.882 13 O -0.383 6.383 14 C -0.220 4.220 15 C 0.113 3.887 16 O -0.308 6.308 17 C -0.160 4.160 18 C -0.184 4.184 19 O -0.361 6.361 20 Si 0.701 3.299 21 C -0.086 4.086 22 H 0.099 0.901 23 H 0.101 0.899 24 H 0.108 0.892 25 H 0.175 0.825 26 H 0.252 0.748 27 H 0.110 0.890 28 H 0.120 0.880 29 H 0.247 0.753 30 H 0.110 0.890 31 H 0.087 0.913 32 H 0.262 0.738 33 H 0.109 0.891 34 H 0.246 0.754 35 H -0.227 1.227 36 H -0.211 1.211 37 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -7.810 0.188 -1.820 8.022 hybrid contribution 1.219 0.727 0.386 1.471 sum -6.591 0.915 -1.433 6.807 Atomic orbital electron populations 1.20946 0.87707 1.05045 1.03750 1.20162 0.98294 0.91641 0.99215 1.21437 0.90882 1.00030 0.95787 1.20416 0.95168 0.92439 1.10631 1.18400 0.86963 0.84491 0.75729 1.90802 1.14996 1.87945 1.50728 1.45736 1.10731 1.04484 1.74486 1.22225 0.97293 0.81484 0.97540 0.87789 1.23429 1.01615 0.92731 0.98906 1.23112 0.93088 0.87447 0.94082 0.88249 1.86463 1.40798 1.54426 1.56627 1.24177 1.03074 0.97184 0.97573 1.18594 0.83502 0.90976 0.95580 1.84653 1.15606 1.96095 1.34426 1.20761 0.94932 0.95031 1.05311 1.25238 1.04134 0.99957 0.89039 1.86498 1.38679 1.94310 1.16637 0.94014 0.80376 0.72907 0.82634 1.21326 0.91708 0.99512 0.96084 0.90097 0.89876 0.89189 0.82491 0.74810 0.89023 0.88046 0.75319 0.89026 0.91297 0.73779 0.89115 0.75432 1.22744 1.21144 0.81740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.27 10.00 71.24 0.71 1.98 16 2 C -0.09 0.48 5.87 -19.89 -0.12 0.36 16 3 C -0.06 0.19 9.18 22.52 0.21 0.39 16 4 C -0.18 -0.83 5.89 -20.01 -0.12 -0.94 16 5 C 0.56 4.39 7.76 86.70 0.67 5.06 16 6 O -0.57 -9.29 14.76 16.90 0.25 -9.04 16 7 N -0.70 -0.54 5.30 -443.21 -2.35 -2.89 16 8 C 0.12 0.10 4.24 45.51 0.19 0.29 16 9 H 0.10 0.46 7.46 -2.38 -0.02 0.44 16 10 C -0.13 0.36 7.66 31.12 0.24 0.59 16 11 C 0.08 -0.18 5.21 31.12 0.16 -0.01 16 12 H 0.10 -0.46 8.14 -2.39 -0.02 -0.48 16 13 O -0.58 0.28 13.67 -148.98 -2.04 -1.75 16 14 C -0.18 0.02 7.71 31.12 0.24 0.26 16 15 C 0.16 1.12 6.69 22.85 0.15 1.27 16 16 O -0.50 -5.58 10.91 -68.78 -0.75 -6.33 16 17 C -0.16 -0.27 5.27 -19.80 -0.10 -0.38 16 18 C -0.08 -0.13 2.38 71.24 0.17 0.04 16 19 O -0.55 -0.63 12.88 -148.98 -1.92 -2.55 16 20 Si 0.80 -1.99 29.91 68.60 2.05 0.07 16 21 C -0.07 0.28 8.30 22.30 0.19 0.47 16 22 H 0.08 -0.88 8.14 -2.39 -0.02 -0.90 16 23 H 0.08 -1.03 8.08 -2.38 -0.02 -1.05 16 24 H 0.09 -1.19 8.08 -2.39 -0.02 -1.21 16 25 H 0.16 -1.45 6.40 -2.91 -0.02 -1.47 16 26 H 0.41 -2.23 6.76 -92.71 -0.63 -2.85 16 27 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 28 H 0.10 -0.38 8.12 -2.39 -0.02 -0.40 16 29 H 0.40 -3.17 9.12 -74.06 -0.68 -3.84 16 30 H 0.09 0.03 8.14 -2.39 -0.02 0.01 16 31 H 0.07 0.10 8.14 -2.38 -0.02 0.08 16 32 H 0.40 2.51 9.06 -74.06 -0.67 1.84 16 33 H 0.09 0.63 7.83 -2.39 -0.02 0.61 16 34 H 0.40 -3.29 8.70 -74.06 -0.64 -3.93 16 35 H -0.30 -1.62 7.11 99.48 0.71 -0.91 16 36 H -0.28 -0.67 7.11 99.48 0.71 0.04 16 37 H 0.17 -1.72 5.10 -2.91 -0.01 -1.74 16 Total: 0.00 -25.67 313.24 -3.59 -29.26 By element: Atomic # 1 Polarization: -14.72 SS G_CDS: -1.43 Total: -16.15 kcal Atomic # 6 Polarization: 6.78 SS G_CDS: 2.59 Total: 9.38 kcal Atomic # 7 Polarization: -0.54 SS G_CDS: -2.35 Total: -2.89 kcal Atomic # 8 Polarization: -15.21 SS G_CDS: -4.46 Total: -19.67 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: 2.05 Total: 0.07 kcal Total: -25.67 -3.59 -29.26 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13422088.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.920 kcal (2) G-P(sol) polarization free energy of solvation -25.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.594 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.590 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.264 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.184 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds