Wall clock time and date at job start Sun Mar 7 2021 22:01:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39203 * 119.93121 * 240.00456 * 4 2 1 6 6 C 1.50697 * 119.96538 * 359.97438 * 5 4 2 7 7 O 1.42902 * 109.47290 * 285.00642 * 6 5 4 8 8 Si 1.86298 * 109.47388 * 165.00260 * 6 5 4 9 9 C 1.37624 * 120.06769 * 179.97438 * 5 4 2 10 10 C 1.39775 * 119.93493 * 0.02562 * 9 5 4 11 11 C 1.47524 * 120.07094 * 180.02562 * 10 9 5 12 12 O 1.21592 * 119.99803 * 359.97438 * 11 10 9 13 13 N 1.34772 * 119.99834 * 180.02562 * 11 10 9 14 14 C 1.46501 * 119.99738 * 179.97438 * 13 11 10 15 15 H 1.08997 * 112.84739 * 336.19125 * 14 13 11 16 16 C 1.53776 * 113.61413 * 107.50120 * 14 13 11 17 17 C 1.53779 * 87.08405 * 89.11550 * 16 14 13 18 18 H 1.08998 * 113.69743 * 139.99114 * 17 16 14 19 19 O 1.42903 * 113.61390 * 270.88581 * 17 16 14 20 20 C 1.53782 * 113.60997 * 204.99774 * 14 13 11 21 21 C 1.39820 * 119.85821 * 359.97438 * 10 9 5 22 22 C 1.37582 * 119.93048 * 359.70200 * 21 10 9 23 23 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 24 24 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 25 25 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 26 26 H 1.09007 * 109.46909 * 60.00094 * 3 2 1 27 27 H 1.08998 * 109.47110 * 179.97438 * 3 2 1 28 28 H 1.09002 * 109.47061 * 300.00284 * 3 2 1 29 29 H 1.08998 * 109.47004 * 45.00152 * 6 5 4 30 30 H 0.96699 * 114.00359 * 59.99790 * 7 6 5 31 31 H 1.48504 * 109.99992 * 300.00460 * 8 6 5 32 32 H 1.48507 * 109.99852 * 61.32086 * 8 6 5 33 33 H 1.08005 * 120.03422 * 180.02562 * 9 5 4 34 34 H 0.96995 * 120.00134 * 359.97438 * 13 11 10 35 35 H 1.09006 * 113.61777 * 203.66232 * 16 14 13 36 36 H 1.09000 * 113.61579 * 334.56763 * 16 14 13 37 37 H 0.96704 * 114.00149 * 277.49540 * 19 17 16 38 38 H 1.08995 * 113.61975 * 25.43276 * 20 14 13 39 39 H 1.09008 * 113.60982 * 156.25505 * 20 14 13 40 40 H 1.08002 * 120.02916 * 180.02562 * 21 10 9 41 41 H 1.08002 * 119.96336 * 180.29518 * 22 21 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7792 -1.8331 -0.8519 6 6 3.1173 -2.2448 0.5578 7 8 4.0867 -1.3442 1.0976 8 14 3.8119 -3.9734 0.5502 9 6 3.2735 -2.5530 -1.9156 10 6 2.9599 -2.1702 -3.2228 11 6 3.4876 -2.9401 -4.3652 12 8 4.1965 -3.9085 -4.1702 13 7 3.1847 -2.5694 -5.6251 14 6 3.7092 -3.3337 -6.7596 15 1 4.6172 -3.8848 -6.5150 16 6 2.6451 -4.1822 -7.4754 17 6 2.3737 -2.9538 -8.3599 18 1 2.2026 -3.1980 -9.4083 19 8 1.3834 -2.0722 -7.8268 20 6 3.8161 -2.5150 -8.0570 21 6 2.1441 -1.0567 -3.4453 22 6 1.6476 -0.3451 -2.3776 23 1 -0.3634 -1.0252 0.0708 24 1 -0.3633 0.4513 -0.9233 25 1 -0.3633 0.5740 0.8525 26 1 1.6461 1.8947 0.8901 27 1 3.0851 1.3422 0.0005 28 1 1.6460 1.8948 -0.8900 29 1 2.2160 -2.2181 1.1701 30 1 3.7923 -0.4238 1.1320 31 1 2.8133 -4.9197 -0.0089 32 1 5.0588 -4.0162 -0.2553 33 1 3.9030 -3.4130 -1.7405 34 1 2.6195 -1.7967 -5.7806 35 1 3.0578 -5.0306 -8.0214 36 1 1.8040 -4.4560 -6.8385 37 1 0.4741 -2.3428 -8.0140 38 1 3.9204 -1.4430 -7.8896 39 1 4.5501 -2.9069 -8.7613 40 1 1.8997 -0.7588 -4.4543 41 1 1.0135 0.5123 -2.5488 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_13422196.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:37 Heat of formation + Delta-G solvation = -43.165608 kcal Electronic energy + Delta-G solvation = -24129.772559 eV Core-core repulsion = 20591.600224 eV Total energy + Delta-G solvation = -3538.172335 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.146 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.99246 -41.10884 -39.73499 -37.73577 -37.40590 -36.16008 -34.28928 -32.76827 -31.37732 -28.59488 -26.98771 -26.84945 -26.77819 -25.07098 -23.42961 -23.05098 -21.40226 -20.75518 -19.37165 -18.34004 -18.10576 -17.82395 -17.50889 -16.73817 -16.59450 -16.27904 -16.19032 -15.97504 -15.73014 -15.38761 -15.10837 -14.96491 -14.69109 -14.15625 -13.97157 -13.81218 -13.63416 -13.52616 -13.21115 -13.09116 -12.78055 -12.72351 -12.68092 -12.40678 -12.37693 -11.55972 -11.47331 -11.35179 -11.04063 -10.76022 -10.34855 -10.26975 -9.92255 -9.66970 -4.95035 -0.57956 -0.03034 1.28933 1.44407 1.55703 1.84664 1.90877 2.43846 2.65276 3.04726 3.37688 3.41322 3.43975 3.52021 3.68665 3.76840 3.81728 3.94347 4.00965 4.07662 4.07949 4.34390 4.35894 4.40248 4.53499 4.57768 4.59059 4.65486 4.67901 4.74204 4.78204 4.87328 4.89595 4.94333 4.96597 4.97087 4.99343 5.07625 5.35022 5.42515 5.74023 6.11367 6.29486 6.63913 6.79249 6.94469 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.522 5.522 3 C 0.022 3.978 4 C 0.135 3.865 5 C -0.112 4.112 6 C -0.063 4.063 7 O -0.543 6.543 8 Si 0.797 3.203 9 C -0.080 4.080 10 C -0.150 4.150 11 C 0.554 3.446 12 O -0.586 6.586 13 N -0.685 5.685 14 C 0.103 3.897 15 H 0.083 0.917 16 C -0.182 4.182 17 C 0.087 3.913 18 H 0.094 0.906 19 O -0.568 6.568 20 C -0.134 4.134 21 C -0.058 4.058 22 C -0.147 4.147 23 H 0.065 0.935 24 H 0.043 0.957 25 H 0.093 0.907 26 H 0.095 0.905 27 H 0.070 0.930 28 H 0.042 0.958 29 H 0.099 0.901 30 H 0.374 0.626 31 H -0.275 1.275 32 H -0.303 1.303 33 H 0.112 0.888 34 H 0.416 0.584 35 H 0.111 0.889 36 H 0.065 0.935 37 H 0.400 0.600 38 H 0.080 0.920 39 H 0.129 0.871 40 H 0.157 0.843 41 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.236 5.131 -2.082 8.340 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.243 5.243 3 C -0.124 4.124 4 C 0.040 3.960 5 C -0.113 4.113 6 C -0.173 4.173 7 O -0.350 6.350 8 Si 0.702 3.298 9 C -0.100 4.100 10 C -0.154 4.154 11 C 0.342 3.658 12 O -0.468 6.468 13 N -0.337 5.337 14 C -0.003 4.003 15 H 0.101 0.899 16 C -0.221 4.221 17 C 0.027 3.973 18 H 0.111 0.889 19 O -0.377 6.377 20 C -0.172 4.172 21 C -0.077 4.077 22 C -0.166 4.166 23 H 0.084 0.916 24 H 0.062 0.938 25 H 0.111 0.889 26 H 0.113 0.887 27 H 0.088 0.912 28 H 0.061 0.939 29 H 0.117 0.883 30 H 0.224 0.776 31 H -0.202 1.202 32 H -0.231 1.231 33 H 0.130 0.870 34 H 0.256 0.744 35 H 0.130 0.870 36 H 0.083 0.917 37 H 0.251 0.749 38 H 0.099 0.901 39 H 0.147 0.853 40 H 0.174 0.826 41 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -4.534 3.362 -1.738 5.907 hybrid contribution -1.396 1.258 -1.878 2.657 sum -5.931 4.621 -3.616 8.343 Atomic orbital electron populations 1.22566 0.83988 1.03095 1.02557 1.59468 1.10055 1.15296 1.39527 1.22616 1.00909 0.85978 1.02892 1.18927 0.93933 0.93034 0.90124 1.20346 0.98825 0.96020 0.96125 1.25050 0.97971 1.04403 0.89844 1.86686 1.41908 1.21825 1.84598 0.92890 0.76625 0.73029 0.87207 1.21056 0.97843 0.98725 0.92351 1.19882 1.03590 0.99315 0.92565 1.18505 0.79657 0.83540 0.84063 1.90770 1.40019 1.29894 1.86076 1.45495 1.51697 1.32606 1.03882 1.22023 0.97684 0.94647 0.85908 0.89925 1.24155 0.99374 0.98930 0.99597 1.22751 0.88999 0.88854 0.96648 0.88869 1.86299 1.19678 1.51487 1.80190 1.23493 0.96628 1.01373 0.95666 1.21431 0.93402 0.91907 1.00957 1.21908 1.01323 1.01395 0.92016 0.91581 0.93804 0.88872 0.88662 0.91164 0.93901 0.88337 0.77646 1.20178 1.23131 0.87040 0.74399 0.87041 0.91658 0.74889 0.90113 0.85313 0.82557 0.82350 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.12 9.33 127.69 1.19 1.07 16 2 N -0.52 1.29 3.70 -745.08 -2.76 -1.47 16 3 C 0.02 -0.13 9.00 127.69 1.15 1.02 16 4 C 0.13 0.23 4.65 38.47 0.18 0.41 16 5 C -0.11 -0.76 5.28 -19.78 -0.10 -0.87 16 6 C -0.06 -0.31 2.29 71.24 0.16 -0.15 16 7 O -0.54 -3.05 12.65 -148.98 -1.89 -4.94 16 8 Si 0.80 5.32 30.40 68.60 2.09 7.41 16 9 C -0.08 -0.94 8.19 22.50 0.18 -0.76 16 10 C -0.15 -1.31 5.88 -20.07 -0.12 -1.43 16 11 C 0.55 6.68 7.76 86.69 0.67 7.35 16 12 O -0.59 -12.30 15.93 -4.01 -0.06 -12.37 16 13 N -0.68 -3.26 5.10 -443.22 -2.26 -5.52 16 14 C 0.10 0.33 4.32 45.52 0.20 0.53 16 15 H 0.08 0.64 7.46 -2.39 -0.02 0.62 16 16 C -0.18 0.14 7.71 31.12 0.24 0.38 16 17 C 0.09 -0.38 5.28 31.12 0.16 -0.22 16 18 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 19 O -0.57 2.49 12.31 -148.98 -1.83 0.66 16 20 C -0.13 0.37 7.66 31.12 0.24 0.61 16 21 C -0.06 -0.06 9.53 22.50 0.21 0.16 16 22 C -0.15 0.15 8.57 22.36 0.19 0.34 16 23 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 24 H 0.04 -0.29 7.08 -2.39 -0.02 -0.31 16 25 H 0.09 -0.71 8.14 -2.38 -0.02 -0.73 16 26 H 0.09 -0.79 8.14 -2.38 -0.02 -0.81 16 27 H 0.07 -0.34 7.51 -2.39 -0.02 -0.36 16 28 H 0.04 -0.29 7.47 -2.39 -0.02 -0.31 16 29 H 0.10 0.16 7.77 -2.39 -0.02 0.14 16 30 H 0.37 0.31 7.56 -74.06 -0.56 -0.25 16 31 H -0.28 -2.90 7.11 99.48 0.71 -2.19 16 32 H -0.30 -4.68 6.81 99.48 0.68 -4.00 16 33 H 0.11 1.85 4.50 -2.91 -0.01 1.84 16 34 H 0.42 0.10 5.61 -92.71 -0.52 -0.42 16 35 H 0.11 -0.34 8.14 -2.38 -0.02 -0.36 16 36 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 37 H 0.40 -4.53 9.12 -74.05 -0.68 -5.21 16 38 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 39 H 0.13 -0.82 8.14 -2.38 -0.02 -0.84 16 40 H 0.16 -0.75 6.39 -2.91 -0.02 -0.77 16 41 H 0.16 -1.01 7.01 -2.91 -0.02 -1.03 16 Total: 0.00 -21.01 332.10 -2.82 -23.83 By element: Atomic # 1 Polarization: -15.38 SS G_CDS: -0.67 Total: -16.05 kcal Atomic # 6 Polarization: 3.88 SS G_CDS: 4.56 Total: 8.44 kcal Atomic # 7 Polarization: -1.97 SS G_CDS: -5.02 Total: -6.99 kcal Atomic # 8 Polarization: -12.86 SS G_CDS: -3.78 Total: -16.65 kcal Atomic # 14 Polarization: 5.32 SS G_CDS: 2.09 Total: 7.41 kcal Total: -21.01 -2.82 -23.83 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13422196.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.331 kcal (2) G-P(sol) polarization free energy of solvation -21.012 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.344 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.822 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.834 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.166 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds