Wall clock time and date at job start Sun Mar 7 2021 22:01:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35990 * 117.00679 * 2 1 4 4 C 1.38561 * 120.06035 * 0.02562 * 3 2 1 5 5 C 1.38278 * 120.01542 * 180.02562 * 4 3 2 6 6 C 1.50703 * 119.92089 * 179.97438 * 5 4 3 7 7 O 1.42896 * 109.47055 * 300.00204 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 180.02562 * 6 5 4 9 9 C 1.38209 * 120.15800 * 0.27978 * 5 4 3 10 10 C 1.38378 * 120.12953 * 359.48492 * 9 5 4 11 11 Cl 1.73600 * 120.01178 * 180.23894 * 10 9 5 12 12 C 1.38623 * 119.97965 * 0.49098 * 10 9 5 13 13 O 1.36019 * 120.07955 * 179.78907 * 12 10 9 14 14 C 1.42909 * 116.99990 * 269.97869 * 13 12 10 15 15 C 1.52998 * 109.46714 * 89.99990 * 14 13 12 16 16 C 1.50694 * 109.46951 * 209.99874 * 14 13 12 17 17 O 1.21286 * 120.00180 * 359.97438 * 16 14 13 18 18 N 1.34776 * 119.99907 * 180.02562 * 16 14 13 19 19 C 1.46505 * 120.00194 * 180.02562 * 18 16 14 20 20 H 1.08997 * 112.84715 * 336.18974 * 19 18 16 21 21 C 1.53779 * 113.61204 * 107.50047 * 19 18 16 22 22 C 1.53781 * 87.08224 * 89.11738 * 21 19 18 23 23 H 1.09008 * 113.61304 * 139.98264 * 22 21 19 24 24 O 1.42895 * 113.60965 * 270.87924 * 22 21 19 25 25 C 1.53781 * 87.08173 * 25.42937 * 22 21 19 26 26 H 1.09002 * 109.46999 * 300.00379 * 1 2 3 27 27 H 1.08998 * 109.47354 * 59.99776 * 1 2 3 28 28 H 1.08996 * 109.47809 * 180.02562 * 1 2 3 29 29 H 1.07997 * 119.99351 * 0.02562 * 4 3 2 30 30 H 1.09002 * 109.47152 * 60.00012 * 6 5 4 31 31 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 32 32 H 1.48497 * 110.00028 * 58.68223 * 8 6 5 33 33 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 34 34 H 1.07994 * 119.93816 * 179.72644 * 9 5 4 35 35 H 1.08996 * 109.46728 * 329.99753 * 14 13 12 36 36 H 1.08996 * 109.47717 * 60.00368 * 15 14 13 37 37 H 1.09003 * 109.46693 * 180.02562 * 15 14 13 38 38 H 1.09001 * 109.47322 * 299.99953 * 15 14 13 39 39 H 0.97002 * 120.00313 * 359.97438 * 18 16 14 40 40 H 1.09003 * 113.61111 * 203.66486 * 21 19 18 41 41 H 1.08996 * 113.61776 * 334.55982 * 21 19 18 42 42 H 0.96707 * 114.00246 * 277.49707 * 24 22 21 43 43 H 1.08994 * 113.61458 * 220.01954 * 25 22 21 44 44 H 1.09001 * 113.61005 * 89.11705 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2932 2.3746 0.0005 5 6 1.9221 3.6061 0.0000 6 6 1.1007 4.8696 0.0000 7 8 0.2758 4.9014 -1.1664 8 14 2.2349 6.3475 -0.0016 9 6 3.3021 3.6810 -0.0069 10 6 4.0606 2.5236 -0.0026 11 17 5.7938 2.6212 -0.0050 12 6 3.4359 1.2860 -0.0015 13 8 4.1795 0.1471 -0.0016 14 6 4.5328 -0.3970 -1.2750 15 6 5.8667 0.1974 -1.7311 16 6 4.6620 -1.8942 -1.1631 17 8 4.4710 -2.4415 -0.0977 18 7 4.9910 -2.6250 -2.2466 19 6 5.1162 -4.0807 -2.1380 20 1 5.3315 -4.4124 -1.1223 21 6 3.9654 -4.8496 -2.8083 22 6 4.8020 -4.8205 -4.0983 23 1 4.7625 -5.7507 -4.6654 24 8 4.5672 -3.6659 -4.9068 25 6 6.0426 -4.7001 -3.1977 26 1 -0.3633 0.5139 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3634 -1.0276 0.0005 29 1 0.2146 2.3192 0.0014 30 1 0.4722 4.8944 0.8902 31 1 0.7693 4.8820 -1.9979 32 1 3.1186 6.3083 -1.1943 33 1 1.4370 7.6000 -0.0022 34 1 3.7895 4.6446 -0.0118 35 1 3.7584 -0.1525 -2.0020 36 1 6.6411 -0.0471 -1.0041 37 1 6.1360 -0.2172 -2.7025 38 1 5.7733 1.2804 -1.8120 39 1 5.1442 -2.1874 -3.0986 40 1 3.8175 -5.8519 -2.4063 41 1 3.0394 -4.2785 -2.8754 42 1 3.7881 -3.7357 -5.4755 43 1 6.7935 -4.0083 -3.5792 44 1 6.4626 -5.6615 -2.9022 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_13428712.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:40 Heat of formation + Delta-G solvation = -126.263406 kcal Electronic energy + Delta-G solvation = -30819.121693 eV Core-core repulsion = 26345.607701 eV Total energy + Delta-G solvation = -4473.513991 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.111 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.04381 -41.38864 -40.05890 -39.30492 -38.91147 -37.81278 -37.00636 -36.05398 -34.41265 -32.74810 -31.46018 -31.32186 -28.60766 -26.90598 -26.77282 -26.15315 -24.68060 -23.71540 -22.83632 -21.79595 -20.65623 -19.68655 -18.91220 -18.86385 -18.37398 -17.97228 -17.58513 -17.30400 -16.90607 -16.52740 -16.32097 -16.25530 -16.06581 -15.96191 -15.77301 -15.58110 -15.13849 -14.83126 -14.49242 -14.41860 -14.18317 -13.88347 -13.68688 -13.57528 -13.51194 -13.30623 -12.83916 -12.76952 -12.68784 -12.63794 -12.40578 -12.33564 -12.01087 -11.91081 -11.66683 -11.47028 -11.39648 -10.83159 -10.72632 -10.67314 -10.13060 -9.85778 -9.46650 -4.91654 -0.37379 -0.05411 0.81800 1.24527 1.40612 1.59406 1.60222 1.93982 2.12858 2.19203 2.64294 3.11435 3.28557 3.44967 3.47732 3.51313 3.68973 3.70669 3.78314 3.80299 3.84119 3.94110 3.97338 4.02721 4.14030 4.23878 4.27383 4.48765 4.55490 4.60844 4.63409 4.66072 4.70097 4.71414 4.81118 4.81361 4.85807 4.96476 5.02357 5.05485 5.06898 5.20707 5.51381 5.87699 6.28793 6.44248 6.45526 6.84334 7.10873 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.324 6.324 3 C 0.118 3.882 4 C -0.164 4.164 5 C -0.060 4.060 6 C -0.075 4.075 7 O -0.541 6.541 8 Si 0.753 3.247 9 C -0.132 4.132 10 C -0.017 4.017 11 Cl -0.037 7.037 12 C 0.051 3.949 13 O -0.308 6.308 14 C 0.079 3.921 15 C -0.174 4.174 16 C 0.517 3.483 17 O -0.566 6.566 18 N -0.689 5.689 19 C 0.108 3.892 20 H 0.081 0.919 21 C -0.182 4.182 22 C 0.085 3.915 23 H 0.091 0.909 24 O -0.567 6.567 25 C -0.134 4.134 26 H 0.070 0.930 27 H 0.073 0.927 28 H 0.112 0.888 29 H 0.159 0.841 30 H 0.138 0.862 31 H 0.389 0.611 32 H -0.275 1.275 33 H -0.296 1.296 34 H 0.162 0.838 35 H 0.100 0.900 36 H 0.063 0.937 37 H 0.096 0.904 38 H 0.085 0.915 39 H 0.416 0.584 40 H 0.109 0.891 41 H 0.065 0.935 42 H 0.399 0.601 43 H 0.081 0.919 44 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.470 0.334 -5.406 5.613 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.237 6.237 3 C 0.071 3.929 4 C -0.183 4.183 5 C -0.061 4.061 6 C -0.185 4.185 7 O -0.349 6.349 8 Si 0.657 3.343 9 C -0.150 4.150 10 C -0.044 4.044 11 Cl -0.008 7.008 12 C 0.006 3.994 13 O -0.224 6.224 14 C 0.020 3.980 15 C -0.232 4.232 16 C 0.303 3.697 17 O -0.444 6.444 18 N -0.343 5.343 19 C 0.003 3.997 20 H 0.100 0.900 21 C -0.221 4.221 22 C 0.026 3.974 23 H 0.108 0.892 24 O -0.376 6.376 25 C -0.172 4.172 26 H 0.089 0.911 27 H 0.091 0.909 28 H 0.131 0.869 29 H 0.176 0.824 30 H 0.155 0.845 31 H 0.238 0.762 32 H -0.201 1.201 33 H -0.224 1.224 34 H 0.179 0.821 35 H 0.118 0.882 36 H 0.082 0.918 37 H 0.114 0.886 38 H 0.103 0.897 39 H 0.255 0.745 40 H 0.128 0.872 41 H 0.084 0.916 42 H 0.250 0.750 43 H 0.099 0.901 44 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -0.986 0.579 -4.180 4.334 hybrid contribution -0.953 -0.406 -1.575 1.885 sum -1.939 0.173 -5.756 6.076 Atomic orbital electron populations 1.23431 0.75921 1.05650 1.02850 1.86221 1.23708 1.25884 1.87912 1.19389 0.90889 0.86003 0.96644 1.21291 1.01599 0.90097 1.05265 1.20168 0.92795 0.95786 0.97340 1.25195 1.00578 1.00694 0.91992 1.86593 1.36183 1.95662 1.16481 0.93995 0.78411 0.73557 0.88345 1.20934 0.92943 0.97346 1.03770 1.20983 0.86240 0.93142 1.04045 1.98391 1.07878 1.98301 1.96188 1.17868 0.87114 0.85672 1.08764 1.86242 1.69918 1.38288 1.27993 1.22245 0.99926 0.90041 0.85761 1.22567 0.94558 1.03373 1.02687 1.20602 0.75948 0.89187 0.83950 1.90716 1.50410 1.73630 1.29663 1.45489 1.69953 1.06914 1.11942 1.21935 0.98169 0.79681 0.99911 0.90040 1.24147 0.97918 1.01745 0.98266 1.22756 0.95328 0.89150 0.90154 0.89151 1.86314 1.52486 1.40198 1.58587 1.23486 0.96511 1.03083 0.94126 0.91118 0.90858 0.86935 0.82356 0.84473 0.76165 1.20104 1.22358 0.82146 0.88211 0.91816 0.88566 0.89654 0.74537 0.87249 0.91629 0.74999 0.90056 0.85513 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.32 -2.42 10.28 -79.57 -0.82 -3.24 16 3 C 0.12 0.68 6.70 22.56 0.15 0.83 16 4 C -0.16 -0.09 8.60 22.36 0.19 0.11 16 5 C -0.06 0.09 5.39 -19.86 -0.11 -0.02 16 6 C -0.08 0.29 2.82 71.24 0.20 0.49 16 7 O -0.54 0.86 12.76 -148.98 -1.90 -1.04 16 8 Si 0.75 -3.01 29.78 68.60 2.04 -0.97 16 9 C -0.13 0.07 8.45 22.30 0.19 0.26 16 10 C -0.02 -0.07 6.24 22.40 0.14 0.07 16 11 Cl -0.04 -0.13 24.90 -2.72 -0.07 -0.20 16 12 C 0.05 0.40 5.56 22.58 0.13 0.52 16 13 O -0.31 -3.70 8.55 -67.36 -0.58 -4.28 16 14 C 0.08 0.50 3.20 29.85 0.10 0.60 16 15 C -0.17 -0.25 8.29 71.98 0.60 0.35 16 16 C 0.52 5.28 7.23 87.66 0.63 5.92 16 17 O -0.57 -11.41 16.10 15.99 0.26 -11.15 16 18 N -0.69 -2.39 5.04 -440.03 -2.22 -4.61 16 19 C 0.11 0.27 4.33 45.52 0.20 0.47 16 20 H 0.08 0.58 7.46 -2.39 -0.02 0.56 16 21 C -0.18 0.22 7.71 31.12 0.24 0.46 16 22 C 0.09 -0.38 5.28 31.12 0.16 -0.22 16 23 H 0.09 -0.69 8.14 -2.38 -0.02 -0.71 16 24 O -0.57 2.39 12.31 -148.98 -1.83 0.56 16 25 C -0.13 0.42 7.66 31.12 0.24 0.66 16 26 H 0.07 -0.26 7.66 -2.39 -0.02 -0.28 16 27 H 0.07 -0.35 7.66 -2.39 -0.02 -0.37 16 28 H 0.11 -0.39 8.14 -2.39 -0.02 -0.41 16 29 H 0.16 -0.43 6.30 -2.91 -0.02 -0.45 16 30 H 0.14 -0.82 7.96 -2.39 -0.02 -0.84 16 31 H 0.39 -2.74 8.70 -74.05 -0.64 -3.39 16 32 H -0.28 0.16 7.10 99.48 0.71 0.87 16 33 H -0.30 -1.04 7.11 99.48 0.71 -0.33 16 34 H 0.16 -0.73 4.86 -2.91 -0.01 -0.74 16 35 H 0.10 0.31 7.91 -2.39 -0.02 0.29 16 36 H 0.06 0.27 8.14 -2.39 -0.02 0.25 16 37 H 0.10 -0.35 7.56 -2.39 -0.02 -0.37 16 38 H 0.08 0.06 5.45 -2.39 -0.01 0.04 16 39 H 0.42 -0.25 7.01 -92.71 -0.65 -0.90 16 40 H 0.11 -0.37 8.14 -2.39 -0.02 -0.39 16 41 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 42 H 0.40 -4.44 9.12 -74.05 -0.68 -5.11 16 43 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 44 H 0.13 -0.83 8.14 -2.39 -0.02 -0.85 16 Total: 0.00 -24.82 375.85 -1.79 -26.62 By element: Atomic # 1 Polarization: -12.42 SS G_CDS: -0.85 Total: -13.27 kcal Atomic # 6 Polarization: 7.42 SS G_CDS: 4.17 Total: 11.58 kcal Atomic # 7 Polarization: -2.39 SS G_CDS: -2.22 Total: -4.61 kcal Atomic # 8 Polarization: -14.29 SS G_CDS: -4.87 Total: -19.16 kcal Atomic # 14 Polarization: -3.01 SS G_CDS: 2.04 Total: -0.97 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -0.07 Total: -0.20 kcal Total: -24.82 -1.79 -26.62 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13428712.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.648 kcal (2) G-P(sol) polarization free energy of solvation -24.821 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.469 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.794 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.616 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.263 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds