Wall clock time and date at job start Sun Mar 7 2021 22:01:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86295 * 109.47214 * 2 1 4 4 C 1.50699 * 109.47370 * 120.00625 * 2 1 3 5 5 C 1.34172 * 125.44197 * 64.99720 * 4 2 1 6 6 C 1.47025 * 105.95704 * 179.97438 * 5 4 2 7 7 C 1.47372 * 127.19168 * 179.97438 * 6 5 4 8 8 O 1.21612 * 120.00427 * 0.02562 * 7 6 5 9 9 N 1.34778 * 120.00025 * 180.02562 * 7 6 5 10 10 C 1.46500 * 120.00453 * 179.97438 * 9 7 6 11 11 H 1.09002 * 112.84754 * 23.80262 * 10 9 7 12 12 C 1.53776 * 113.61821 * 154.99924 * 10 9 7 13 13 C 1.53774 * 87.08408 * 89.20147 * 12 10 9 14 14 H 1.08995 * 113.62199 * 140.06511 * 13 12 10 15 15 O 1.42903 * 113.61673 * 270.88945 * 13 12 10 16 16 C 1.53777 * 87.08184 * 25.43089 * 13 12 10 17 17 C 1.36416 * 105.61464 * 0.22752 * 6 5 4 18 18 O 1.33659 * 108.39404 * 359.63088 * 17 6 5 19 19 H 0.96696 * 114.00279 * 59.99680 * 1 2 3 20 20 H 1.09005 * 109.46911 * 240.00580 * 2 1 3 21 21 H 1.48505 * 109.99895 * 60.00533 * 3 2 1 22 22 H 1.48501 * 110.00440 * 181.32297 * 3 2 1 23 23 H 1.07998 * 127.01931 * 0.02562 * 5 4 2 24 24 H 0.97003 * 119.99584 * 359.97438 * 9 7 6 25 25 H 1.09002 * 113.61135 * 334.65240 * 12 10 9 26 26 H 1.08996 * 113.61949 * 203.75319 * 12 10 9 27 27 H 0.96700 * 114.00311 * 179.97438 * 15 13 12 28 28 H 1.09007 * 113.61025 * 89.11391 * 16 13 12 29 29 H 1.08997 * 113.62410 * 220.02130 * 16 13 12 30 30 H 1.07998 * 125.80396 * 179.74872 * 17 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.7552 -2.0123 1.5035 6 6 2.4132 -2.2465 2.7973 7 6 2.5009 -3.5194 3.5346 8 8 1.9933 -4.5246 3.0752 9 7 3.1436 -3.5698 4.7182 10 6 3.2303 -4.8351 5.4515 11 1 3.1270 -5.7067 4.8053 12 6 4.4350 -4.9138 6.4040 13 6 3.5260 -4.2943 7.4786 14 1 3.6623 -4.7283 8.4691 15 8 3.5463 -2.8655 7.4912 16 6 2.3377 -4.8865 6.7027 17 6 2.9207 -1.0379 3.1752 18 8 2.6270 -0.1422 2.2276 19 1 -0.3933 0.4417 -0.7650 20 1 1.7923 -0.5138 -0.8901 21 1 1.5616 2.4678 1.2086 22 1 3.5346 1.7703 -0.0322 23 1 1.2366 -2.7397 0.8966 24 1 3.5488 -2.7681 5.0845 25 1 5.2656 -4.2714 6.1115 26 1 4.7466 -5.9333 6.6306 27 1 2.9761 -2.4699 8.1648 28 1 2.0759 -5.8987 7.0110 29 1 1.4750 -4.2222 6.6512 30 1 3.4684 -0.8391 4.0845 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_13456056.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:48 Heat of formation + Delta-G solvation = -61.605483 kcal Electronic energy + Delta-G solvation = -17027.946461 eV Core-core repulsion = 13986.094848 eV Total energy + Delta-G solvation = -3041.851613 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 240.088 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -43.69987 -41.22928 -39.39125 -37.95064 -36.12491 -34.30125 -33.49740 -31.76959 -26.88217 -26.85150 -25.98539 -24.18624 -22.17137 -21.00461 -20.63713 -19.00975 -18.70171 -18.33073 -17.34312 -17.12975 -16.94055 -16.30102 -15.94220 -15.81845 -15.56270 -15.28313 -14.64809 -14.15685 -14.08554 -13.77310 -13.66328 -13.57957 -12.77853 -12.69009 -12.41254 -12.08158 -11.57065 -10.99933 -10.83726 -10.82848 -10.53448 -10.03812 -9.76197 -5.12057 0.25454 0.90645 1.11756 1.57268 1.66390 1.98931 2.06235 2.38477 2.90811 3.25950 3.38535 3.55532 3.58156 3.66032 3.76086 3.91483 4.01465 4.19759 4.39575 4.56074 4.59047 4.62056 4.71526 4.80555 4.82036 4.90329 4.95068 5.25421 5.56764 5.86834 6.45283 6.46023 6.58378 7.27479 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.036 4.036 3 Si 0.712 3.288 4 C -0.017 4.017 5 C -0.117 4.117 6 C -0.235 4.235 7 C 0.590 3.410 8 O -0.533 6.533 9 N -0.704 5.704 10 C 0.126 3.874 11 H 0.106 0.894 12 C -0.142 4.142 13 C 0.077 3.923 14 H 0.073 0.927 15 O -0.556 6.556 16 C -0.186 4.186 17 C 0.033 3.967 18 O -0.174 6.174 19 H 0.391 0.609 20 H 0.096 0.904 21 H -0.249 1.249 22 H -0.253 1.253 23 H 0.164 0.836 24 H 0.405 0.595 25 H 0.083 0.917 26 H 0.111 0.889 27 H 0.386 0.614 28 H 0.101 0.899 29 H 0.078 0.922 30 H 0.215 0.785 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.148 2.865 0.377 3.110 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.146 4.146 3 Si 0.611 3.389 4 C -0.065 4.065 5 C -0.137 4.137 6 C -0.240 4.240 7 C 0.378 3.622 8 O -0.410 6.410 9 N -0.356 5.356 10 C 0.020 3.980 11 H 0.124 0.876 12 C -0.180 4.180 13 C 0.018 3.982 14 H 0.091 0.909 15 O -0.362 6.362 16 C -0.225 4.225 17 C -0.037 4.037 18 O -0.070 6.070 19 H 0.240 0.760 20 H 0.113 0.887 21 H -0.174 1.174 22 H -0.177 1.177 23 H 0.182 0.818 24 H 0.241 0.759 25 H 0.102 0.898 26 H 0.129 0.871 27 H 0.234 0.766 28 H 0.119 0.881 29 H 0.096 0.904 30 H 0.232 0.768 Dipole moment (debyes) X Y Z Total from point charges 1.845 2.624 0.519 3.250 hybrid contribution -0.217 -0.364 1.023 1.107 sum 1.628 2.260 1.542 3.184 Atomic orbital electron populations 1.86473 1.16354 1.82027 1.50215 1.23823 0.86197 1.11797 0.92735 0.95176 0.80833 0.76044 0.86870 1.21167 1.01429 0.92216 0.91686 1.22502 1.00560 0.95284 0.95310 1.21504 1.09078 0.94279 0.99142 1.17243 0.77824 0.87018 0.80140 1.90805 1.46488 1.35589 1.68126 1.45491 1.57188 1.12282 1.20633 1.21756 0.96054 0.87615 0.92564 0.87628 1.23461 0.97349 1.02228 0.94921 1.22804 0.96197 0.81255 0.97978 0.90926 1.86334 1.70181 1.18551 1.61154 1.24150 0.98454 1.02791 0.97059 1.24523 0.99649 0.86788 0.92776 1.83702 1.57667 1.39228 1.26424 0.76019 0.88656 1.17360 1.17717 0.81823 0.75904 0.89831 0.87072 0.76600 0.88101 0.90376 0.76846 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.03 12.86 -35.23 -0.45 -0.48 16 2 C -0.04 0.00 2.96 36.01 0.11 0.11 16 3 Si 0.71 -0.80 32.09 -169.99 -5.46 -6.26 16 4 C -0.02 -0.06 6.22 -35.74 -0.22 -0.28 16 5 C -0.12 -0.48 10.90 -37.45 -0.41 -0.89 16 6 C -0.24 -0.85 6.31 -103.28 -0.65 -1.50 16 7 C 0.59 2.73 7.81 -12.54 -0.10 2.63 16 8 O -0.53 -4.47 16.58 5.27 0.09 -4.38 16 9 N -0.70 -1.07 5.15 -54.11 -0.28 -1.35 16 10 C 0.13 0.11 4.32 -67.12 -0.29 -0.18 16 11 H 0.11 0.24 7.46 -51.93 -0.39 -0.15 16 12 C -0.14 0.19 7.66 -25.93 -0.20 -0.01 16 13 C 0.08 -0.13 5.28 -25.92 -0.14 -0.26 16 14 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 15 O -0.56 0.86 12.32 -35.23 -0.43 0.42 16 16 C -0.19 0.11 7.71 -25.92 -0.20 -0.09 16 17 C 0.03 0.04 11.61 30.08 0.35 0.39 16 18 O -0.17 -0.55 8.90 7.63 0.07 -0.48 16 19 H 0.39 -2.17 8.74 45.56 0.40 -1.77 16 20 H 0.10 -0.23 7.96 -51.93 -0.41 -0.64 16 21 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 22 H -0.25 -0.42 7.11 56.52 0.40 -0.01 16 23 H 0.16 0.63 8.06 -52.49 -0.42 0.20 16 24 H 0.40 -0.14 6.57 -40.82 -0.27 -0.41 16 25 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 27 H 0.39 -1.87 9.12 45.56 0.42 -1.46 16 28 H 0.10 -0.16 8.14 -51.92 -0.42 -0.59 16 29 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 30 H 0.22 -0.65 7.47 -52.49 -0.39 -1.04 16 LS Contribution 268.99 15.07 4.05 4.05 Total: 0.00 -10.38 268.99 -6.54 -16.93 By element: Atomic # 1 Polarization: -5.98 SS G_CDS: -2.38 Total: -8.36 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -1.75 Total: -0.10 kcal Atomic # 7 Polarization: -1.07 SS G_CDS: -0.28 Total: -1.35 kcal Atomic # 8 Polarization: -4.19 SS G_CDS: -0.73 Total: -4.92 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.46 Total: -6.26 kcal Total LS contribution 4.05 Total: 4.05 kcal Total: -10.38 -6.54 -16.93 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13456056.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.678 kcal (2) G-P(sol) polarization free energy of solvation -10.385 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.062 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.543 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.928 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.605 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds