Wall clock time and date at job start Sun Mar 7 2021 22:01:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37865 * 126.46246 * 2 1 4 4 C 1.46679 * 126.22894 * 0.05522 * 3 2 1 5 5 O 1.21694 * 120.00251 * 359.97438 * 4 3 2 6 6 N 1.34782 * 120.00146 * 180.02562 * 4 3 2 7 7 C 1.46499 * 119.99996 * 180.02562 * 6 4 3 8 8 H 1.08998 * 112.85022 * 336.18842 * 7 6 4 9 9 C 1.53779 * 113.61663 * 107.50214 * 7 6 4 10 10 C 1.53784 * 87.08071 * 89.11379 * 9 7 6 11 11 H 1.09000 * 113.68966 * 139.99767 * 10 9 7 12 12 O 1.42905 * 113.61170 * 270.88542 * 10 9 7 13 13 C 1.53775 * 87.08293 * 25.43088 * 10 9 7 14 14 N 1.37646 * 107.53699 * 179.76278 * 3 2 1 15 15 C 1.35531 * 108.64635 * 0.42573 * 14 3 2 16 16 C 1.50699 * 125.56820 * 179.83302 * 15 14 3 17 17 O 1.42907 * 109.46603 * 64.72018 * 16 15 14 18 18 Si 1.86298 * 109.47032 * 184.71321 * 16 15 14 19 19 C 1.35455 * 108.86747 * 359.56957 * 15 14 3 20 20 H 1.08995 * 109.47318 * 270.00082 * 1 2 3 21 21 H 1.08997 * 109.47284 * 29.99815 * 1 2 3 22 22 H 1.08998 * 109.47494 * 149.99968 * 1 2 3 23 23 H 0.96995 * 119.99535 * 359.97438 * 6 4 3 24 24 H 1.08998 * 113.61676 * 203.66140 * 9 7 6 25 25 H 1.09000 * 113.61346 * 334.56913 * 9 7 6 26 26 H 0.96702 * 113.99703 * 277.49622 * 12 10 9 27 27 H 1.08999 * 113.62053 * 220.01600 * 13 10 9 28 28 H 1.08996 * 113.68767 * 89.12541 * 13 10 9 29 29 H 0.97003 * 125.68063 * 180.27579 * 14 3 2 30 30 H 1.08996 * 109.47117 * 304.71931 * 16 15 14 31 31 H 0.96697 * 114.00527 * 59.99993 * 17 16 15 32 32 H 1.48506 * 109.99834 * 58.68765 * 18 16 15 33 33 H 1.48502 * 110.00011 * 180.02562 * 18 16 15 34 34 H 1.08003 * 126.06848 * 180.30599 * 19 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1088 0.0000 4 6 1.8899 2.5091 0.0011 5 8 0.7027 2.7766 0.0017 6 7 2.8038 3.4998 0.0005 7 6 2.3679 4.8985 0.0022 8 1 1.3640 5.0294 -0.4017 9 6 2.5912 5.6117 1.3461 10 6 3.9865 5.9916 0.8231 11 1 4.2904 7.0057 1.0826 12 8 4.9918 5.0190 1.1157 13 6 3.4030 5.8669 -0.5942 14 7 3.6283 0.6623 0.0054 15 6 3.6218 -0.6929 -0.0008 16 6 4.8433 -1.5754 -0.0014 17 8 5.5629 -1.3935 1.2198 18 14 4.3220 -3.3574 -0.1554 19 6 2.3379 -1.1248 -0.0005 20 1 -0.3634 0.0000 1.0276 21 1 -0.3634 0.8900 -0.5138 22 1 -0.3634 -0.8899 -0.5138 23 1 3.7500 3.2867 -0.0004 24 1 1.9347 6.4681 1.5004 25 1 2.6144 4.9355 2.2007 26 1 5.3627 5.0923 2.0058 27 1 4.0814 5.3968 -1.3060 28 1 2.9682 6.7924 -0.9717 29 1 4.4191 1.2242 0.0105 30 1 5.4830 -1.3099 -0.8430 31 1 5.0538 -1.6114 2.0126 32 1 3.5453 -3.5531 -1.4059 33 1 5.5176 -4.2381 -0.1565 34 1 2.0135 -2.1549 0.0000 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_13940406.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:51 Heat of formation + Delta-G solvation = -44.992373 kcal Electronic energy + Delta-G solvation = -18974.131946 eV Core-core repulsion = 15875.181775 eV Total energy + Delta-G solvation = -3098.950171 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -42.54779 -41.10924 -39.31895 -37.75948 -36.18326 -34.21568 -33.22540 -31.49895 -28.12043 -27.18972 -26.90909 -25.23985 -22.68329 -21.58296 -20.70229 -20.37166 -19.53411 -18.47950 -17.95625 -17.01905 -16.74502 -16.61317 -15.93019 -15.85945 -15.44383 -15.27806 -14.88199 -14.64517 -14.28408 -13.97219 -13.71906 -13.60837 -13.50784 -13.41626 -12.89397 -12.75847 -12.44215 -12.13915 -11.99092 -11.59864 -10.96637 -10.85363 -10.68581 -10.09745 -9.77257 -9.11149 -5.04554 0.42100 1.13941 1.56592 1.66108 1.86488 2.04634 2.20840 2.40742 2.88694 3.31217 3.35378 3.55586 3.57768 3.72465 3.90130 3.99035 4.19705 4.21190 4.40111 4.53415 4.56390 4.68837 4.75496 4.78350 4.85131 4.88253 4.92670 5.06428 5.26256 5.42488 5.55175 5.71313 5.95806 6.30057 6.39867 6.43987 6.57551 7.22502 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.065 4.065 3 C -0.055 4.055 4 C 0.591 3.409 5 O -0.524 6.524 6 N -0.709 5.709 7 C 0.127 3.873 8 H 0.107 0.893 9 C -0.185 4.185 10 C 0.076 3.924 11 H 0.073 0.927 12 O -0.556 6.556 13 C -0.143 4.143 14 N -0.523 5.523 15 C 0.025 3.975 16 C -0.055 4.055 17 O -0.543 6.543 18 Si 0.721 3.279 19 C -0.201 4.201 20 H 0.070 0.930 21 H 0.080 0.920 22 H 0.065 0.935 23 H 0.401 0.599 24 H 0.101 0.899 25 H 0.077 0.923 26 H 0.386 0.614 27 H 0.082 0.918 28 H 0.111 0.889 29 H 0.417 0.583 30 H 0.114 0.886 31 H 0.383 0.617 32 H -0.253 1.253 33 H -0.253 1.253 34 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.821 0.723 2.347 3.057 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.073 4.073 3 C -0.168 4.168 4 C 0.379 3.621 5 O -0.400 6.400 6 N -0.361 5.361 7 C 0.021 3.979 8 H 0.125 0.875 9 C -0.224 4.224 10 C 0.017 3.983 11 H 0.091 0.909 12 O -0.363 6.363 13 C -0.180 4.180 14 N -0.119 5.119 15 C -0.093 4.093 16 C -0.166 4.166 17 O -0.348 6.348 18 Si 0.620 3.380 19 C -0.225 4.225 20 H 0.088 0.912 21 H 0.099 0.901 22 H 0.084 0.916 23 H 0.237 0.763 24 H 0.119 0.881 25 H 0.096 0.904 26 H 0.234 0.766 27 H 0.100 0.900 28 H 0.130 0.870 29 H 0.255 0.745 30 H 0.132 0.868 31 H 0.231 0.769 32 H -0.177 1.177 33 H -0.178 1.178 34 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 1.461 0.330 0.841 1.718 hybrid contribution 1.297 1.091 0.361 1.733 sum 2.758 1.421 1.202 3.327 Atomic orbital electron populations 1.20387 0.88848 1.03197 1.02559 1.19931 0.96035 0.90316 1.01046 1.20219 0.83587 0.93458 1.19571 1.17059 0.85846 0.83015 0.76163 1.90828 1.15933 1.83167 1.50116 1.45563 1.09678 1.05263 1.75567 1.21754 0.99356 0.80160 0.96629 0.87503 1.24142 0.98068 1.01564 0.98581 1.22811 0.87271 0.91586 0.96609 0.90911 1.86334 1.55759 1.56250 1.37937 1.23466 0.97837 1.00583 0.96163 1.41887 1.07218 1.06589 1.56228 1.21103 0.96860 0.83329 1.08043 1.24964 0.92113 1.09231 0.90250 1.86502 1.41990 1.91156 1.15198 0.94019 0.82723 0.73370 0.87852 1.20593 0.90776 0.99024 1.12131 0.91161 0.90084 0.91647 0.76348 0.88069 0.90393 0.76590 0.89977 0.87042 0.74508 0.86840 0.76895 1.17687 1.17805 0.83177 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.20 9.83 36.00 0.35 0.15 16 2 C -0.06 -0.18 6.21 -104.16 -0.65 -0.82 16 3 C -0.06 -0.15 7.06 -81.98 -0.58 -0.73 16 4 C 0.59 2.15 7.79 -12.85 -0.10 2.05 16 5 O -0.52 -3.44 14.40 5.19 0.07 -3.37 16 6 N -0.71 -0.76 5.15 -54.32 -0.28 -1.04 16 7 C 0.13 0.05 4.33 -67.12 -0.29 -0.24 16 8 H 0.11 0.17 7.46 -51.93 -0.39 -0.21 16 9 C -0.18 0.18 7.71 -25.92 -0.20 -0.02 16 10 C 0.08 -0.14 5.28 -25.92 -0.14 -0.27 16 11 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 12 O -0.56 0.87 12.31 -35.23 -0.43 0.43 16 13 C -0.14 0.21 7.66 -25.92 -0.20 0.01 16 14 N -0.52 -0.23 5.99 -5.70 -0.03 -0.26 16 15 C 0.02 0.01 6.46 -81.95 -0.53 -0.52 16 16 C -0.06 0.06 3.08 36.01 0.11 0.17 16 17 O -0.54 0.44 12.88 -35.23 -0.45 -0.02 16 18 Si 0.72 -1.29 30.56 -169.99 -5.19 -6.48 16 19 C -0.20 -0.17 9.27 -39.98 -0.37 -0.54 16 20 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 21 H 0.08 0.32 6.49 -51.93 -0.34 -0.02 16 22 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 23 H 0.40 -0.09 6.72 -40.82 -0.27 -0.37 16 24 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 25 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 26 H 0.39 -1.87 9.12 45.56 0.42 -1.45 16 27 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.11 -0.33 8.14 -51.93 -0.42 -0.76 16 29 H 0.42 -0.57 8.19 -40.82 -0.33 -0.91 16 30 H 0.11 -0.10 7.96 -51.93 -0.41 -0.52 16 31 H 0.38 -1.64 8.70 45.56 0.40 -1.25 16 32 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 33 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 34 H 0.15 -0.21 6.19 -52.48 -0.32 -0.53 16 LS Contribution 287.99 15.07 4.34 4.34 Total: 0.00 -7.75 287.99 -7.98 -15.73 By element: Atomic # 1 Polarization: -5.15 SS G_CDS: -3.42 Total: -8.56 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -2.59 Total: -0.77 kcal Atomic # 7 Polarization: -0.99 SS G_CDS: -0.31 Total: -1.30 kcal Atomic # 8 Polarization: -2.14 SS G_CDS: -0.81 Total: -2.95 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.19 Total: -6.48 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -7.75 -7.98 -15.73 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_13940406.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.261 kcal (2) G-P(sol) polarization free energy of solvation -7.748 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.009 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.731 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.992 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds