Wall clock time and date at job start Sun Mar 7 2021 22:01:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86292 * 109.47248 * 2 1 4 4 C 1.50708 * 109.47043 * 240.00014 * 2 1 3 5 5 C 1.34849 * 125.88737 * 120.20092 * 4 2 1 6 6 C 1.40899 * 107.40982 * 180.25597 * 5 4 2 7 7 C 1.34845 * 107.41955 * 359.73389 * 6 5 4 8 8 C 1.50697 * 125.88970 * 180.02562 * 7 6 5 9 9 C 1.50699 * 109.47134 * 274.97565 * 8 7 6 10 10 O 1.21284 * 119.99764 * 359.97438 * 9 8 7 11 11 N 1.34771 * 120.00117 * 179.97438 * 9 8 7 12 12 C 1.46508 * 120.00159 * 179.97438 * 11 9 8 13 13 H 1.09000 * 112.84752 * 336.20326 * 12 11 9 14 14 C 1.53788 * 113.61331 * 107.50208 * 12 11 9 15 15 C 1.53782 * 87.07929 * 89.11609 * 14 12 11 16 16 H 1.08997 * 113.61248 * 139.97641 * 15 14 12 17 17 O 1.42900 * 113.61648 * 270.88400 * 15 14 12 18 18 C 1.53775 * 113.61780 * 205.00111 * 12 11 9 19 19 N 1.36341 * 125.88720 * 299.99852 * 4 2 1 20 20 H 0.96693 * 114.00167 * 300.00090 * 1 2 3 21 21 H 1.08997 * 109.47200 * 120.00372 * 2 1 3 22 22 H 1.48497 * 110.00398 * 178.68212 * 3 2 1 23 23 H 1.48501 * 110.00257 * 300.00131 * 3 2 1 24 24 H 1.07996 * 126.29737 * 359.97438 * 5 4 2 25 25 H 1.07997 * 126.28611 * 179.74054 * 6 5 4 26 26 H 1.09002 * 109.47064 * 34.97337 * 8 7 6 27 27 H 1.08995 * 109.47287 * 154.97568 * 8 7 6 28 28 H 0.97006 * 120.00576 * 0.02562 * 11 9 8 29 29 H 1.08993 * 113.61615 * 203.66798 * 14 12 11 30 30 H 1.08999 * 113.61305 * 334.57372 * 14 12 11 31 31 H 0.96696 * 113.99781 * 277.49182 * 17 15 14 32 32 H 1.09000 * 113.61392 * 25.43254 * 18 12 11 33 33 H 1.09001 * 113.62047 * 156.25341 * 18 12 11 34 34 H 0.97001 * 125.64231 * 0.02562 * 19 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7130 -0.1738 -2.1894 6 6 2.9417 -1.1736 -3.1554 7 6 2.2961 -2.2848 -2.7470 8 6 2.2647 -3.6053 -3.4725 9 6 1.1685 -3.5845 -4.5063 10 8 0.4801 -2.5950 -4.6404 11 7 0.9530 -4.6655 -5.2818 12 6 -0.1131 -4.6455 -6.2865 13 1 -0.8987 -3.9260 -6.0558 14 6 0.4041 -4.5533 -7.7318 15 6 0.4475 -6.0905 -7.7310 16 1 0.1143 -6.5372 -8.6678 17 8 1.6883 -6.6280 -7.2687 18 6 -0.6443 -6.0424 -6.6490 19 7 1.6771 -2.0077 -1.5642 20 1 -0.3933 0.4417 0.7650 21 1 1.7924 -0.5139 0.8899 22 1 3.5346 1.7703 0.0321 23 1 1.5615 2.4679 -1.2085 24 1 3.0902 0.8379 -2.2148 25 1 3.5268 -1.0692 -4.0572 26 1 3.2235 -3.7733 -3.9629 27 1 2.0761 -4.4074 -2.7590 28 1 1.5032 -5.4571 -5.1743 29 1 -0.3223 -4.1374 -8.4299 30 1 1.3867 -4.0889 -7.8151 31 1 2.3788 -6.6609 -7.9448 32 1 -0.5081 -6.7800 -5.8582 33 1 -1.6579 -6.0337 -7.0497 34 1 1.1406 -2.6294 -1.0479 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_14644196.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:54 Heat of formation + Delta-G solvation = -39.246410 kcal Electronic energy + Delta-G solvation = -18526.084784 eV Core-core repulsion = 15427.383777 eV Total energy + Delta-G solvation = -3098.701007 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -42.23723 -41.18583 -39.45460 -37.61589 -36.09519 -33.96536 -32.85047 -31.82864 -29.44721 -26.86183 -25.80928 -24.62807 -22.04980 -21.23497 -20.93307 -20.59128 -18.73436 -18.39743 -18.02364 -17.82552 -16.85001 -16.39784 -16.07945 -15.71327 -15.34859 -14.97917 -14.91751 -14.67918 -14.28307 -13.98147 -13.79051 -13.70590 -13.25321 -13.22717 -12.78085 -12.71940 -12.41823 -12.36964 -11.85581 -11.54015 -10.84898 -10.75729 -10.40384 -9.96683 -9.67791 -8.83381 -4.93348 1.14006 1.34670 1.71052 1.76326 1.95961 2.13017 2.32227 2.52549 2.94283 3.40760 3.45514 3.62401 3.71031 3.77337 3.99540 4.02423 4.04850 4.09720 4.32863 4.41016 4.57517 4.59238 4.61336 4.74113 4.83697 4.85946 4.91476 4.96335 5.33221 5.38901 5.62080 6.09825 6.23220 6.48196 6.59035 6.62121 6.73236 7.33772 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.053 4.053 3 Si 0.715 3.285 4 C 0.036 3.964 5 C -0.196 4.196 6 C -0.171 4.171 7 C 0.038 3.962 8 C -0.070 4.070 9 C 0.511 3.489 10 O -0.524 6.524 11 N -0.709 5.709 12 C 0.125 3.875 13 H 0.102 0.898 14 C -0.185 4.185 15 C 0.077 3.923 16 H 0.072 0.928 17 O -0.554 6.554 18 C -0.142 4.142 19 N -0.533 5.533 20 H 0.383 0.617 21 H 0.070 0.930 22 H -0.254 1.254 23 H -0.250 1.250 24 H 0.133 0.867 25 H 0.137 0.863 26 H 0.117 0.883 27 H 0.100 0.900 28 H 0.407 0.593 29 H 0.098 0.902 30 H 0.077 0.923 31 H 0.385 0.615 32 H 0.082 0.918 33 H 0.109 0.891 34 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.816 -3.268 1.532 3.701 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.163 4.163 3 Si 0.614 3.386 4 C -0.078 4.078 5 C -0.220 4.220 6 C -0.196 4.196 7 C -0.076 4.076 8 C -0.111 4.111 9 C 0.297 3.703 10 O -0.399 6.399 11 N -0.362 5.362 12 C 0.019 3.981 13 H 0.120 0.880 14 C -0.224 4.224 15 C 0.018 3.982 16 H 0.089 0.911 17 O -0.360 6.360 18 C -0.180 4.180 19 N -0.127 5.127 20 H 0.231 0.769 21 H 0.088 0.912 22 H -0.179 1.179 23 H -0.174 1.174 24 H 0.151 0.849 25 H 0.155 0.845 26 H 0.136 0.864 27 H 0.118 0.882 28 H 0.244 0.756 29 H 0.117 0.883 30 H 0.096 0.904 31 H 0.233 0.767 32 H 0.101 0.899 33 H 0.127 0.873 34 H 0.250 0.750 Dipole moment (debyes) X Y Z Total from point charges 0.469 -2.415 1.105 2.697 hybrid contribution 0.361 -1.289 -0.584 1.460 sum 0.830 -3.704 0.522 3.831 Atomic orbital electron populations 1.86518 1.17448 1.81878 1.49781 1.24440 0.85492 1.10941 0.95404 0.95446 0.80434 0.75880 0.86841 1.19657 1.04445 0.84899 0.98758 1.20499 1.05897 0.99523 0.96121 1.20529 1.05979 0.92268 1.00798 1.19456 1.02413 0.96582 0.89138 1.20112 0.99758 0.94532 0.96671 1.20611 0.85002 0.82918 0.81791 1.90776 1.47830 1.32340 1.68922 1.45673 1.36138 1.17479 1.36893 1.21731 0.90497 0.98015 0.87825 0.87971 1.24137 1.03180 0.97337 0.97779 1.22786 0.85457 0.92880 0.97060 0.91050 1.86348 1.22536 1.85136 1.42014 1.23452 0.98404 0.97119 0.99042 1.41749 1.40886 1.10951 1.19125 0.76911 0.91189 1.17874 1.17407 0.84922 0.84516 0.86450 0.88157 0.75642 0.88311 0.90415 0.76658 0.89893 0.87277 0.75001 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.87 12.86 -35.23 -0.45 -1.32 16 2 C -0.05 -0.07 3.07 36.01 0.11 0.04 16 3 Si 0.71 0.01 30.58 -169.99 -5.20 -5.19 16 4 C 0.04 0.16 6.54 -81.79 -0.53 -0.37 16 5 C -0.20 -1.07 9.37 -39.78 -0.37 -1.44 16 6 C -0.17 -0.85 10.76 -39.78 -0.43 -1.28 16 7 C 0.04 0.14 5.66 -81.79 -0.46 -0.33 16 8 C -0.07 -0.02 6.24 -29.04 -0.18 -0.20 16 9 C 0.51 1.50 7.82 -10.99 -0.09 1.42 16 10 O -0.52 -4.08 15.63 5.55 0.09 -4.00 16 11 N -0.71 -0.44 5.15 -53.01 -0.27 -0.71 16 12 C 0.13 0.09 4.32 -67.11 -0.29 -0.20 16 13 H 0.10 0.26 7.46 -51.93 -0.39 -0.12 16 14 C -0.19 0.10 7.71 -25.91 -0.20 -0.10 16 15 C 0.08 -0.12 5.28 -25.91 -0.14 -0.26 16 16 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 17 O -0.55 0.87 12.31 -35.23 -0.43 0.44 16 18 C -0.14 0.17 7.66 -25.92 -0.20 -0.02 16 19 N -0.53 -1.87 6.08 -5.44 -0.03 -1.90 16 20 H 0.38 -1.48 8.74 45.56 0.40 -1.08 16 21 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 22 H -0.25 -0.60 7.11 56.52 0.40 -0.19 16 23 H -0.25 -0.96 7.11 56.52 0.40 -0.56 16 24 H 0.13 0.62 6.22 -52.49 -0.33 0.30 16 25 H 0.14 0.48 8.06 -52.49 -0.42 0.05 16 26 H 0.12 -0.23 8.14 -51.93 -0.42 -0.65 16 27 H 0.10 -0.22 8.14 -51.93 -0.42 -0.65 16 28 H 0.41 -0.43 7.59 -40.82 -0.31 -0.74 16 29 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.39 -1.90 9.12 45.56 0.42 -1.49 16 32 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 33 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 34 H 0.41 0.55 8.96 -40.82 -0.37 0.18 16 LS Contribution 292.37 15.07 4.41 4.41 Total: 0.00 -10.94 292.37 -8.25 -19.18 By element: Atomic # 1 Polarization: -4.60 SS G_CDS: -3.57 Total: -8.17 kcal Atomic # 6 Polarization: 0.04 SS G_CDS: -2.78 Total: -2.74 kcal Atomic # 7 Polarization: -2.30 SS G_CDS: -0.31 Total: -2.61 kcal Atomic # 8 Polarization: -4.09 SS G_CDS: -0.80 Total: -4.89 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: -5.20 Total: -5.19 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -10.94 -8.25 -19.18 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_14644196.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.062 kcal (2) G-P(sol) polarization free energy of solvation -10.936 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.998 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.248 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.184 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.246 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds