Wall clock time and date at job start Sun Mar 7 2021 22:01:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86292 * 109.47248 * 2 1 4 4 C 1.50708 * 109.47043 * 240.00014 * 2 1 3 5 5 C 1.34849 * 125.88737 * 120.20092 * 4 2 1 6 6 C 1.40899 * 107.40982 * 180.25597 * 5 4 2 7 7 C 1.34845 * 107.41955 * 359.73389 * 6 5 4 8 8 C 1.50697 * 125.88970 * 180.02562 * 7 6 5 9 9 C 1.50699 * 109.47134 * 274.97565 * 8 7 6 10 10 O 1.21284 * 119.99764 * 359.97438 * 9 8 7 11 11 N 1.34771 * 120.00117 * 179.97438 * 9 8 7 12 12 C 1.46508 * 120.00159 * 179.97438 * 11 9 8 13 13 H 1.09000 * 112.84752 * 336.20326 * 12 11 9 14 14 C 1.53788 * 113.61331 * 107.50208 * 12 11 9 15 15 C 1.53782 * 87.07929 * 89.11609 * 14 12 11 16 16 H 1.08997 * 113.61248 * 139.97641 * 15 14 12 17 17 O 1.42900 * 113.61648 * 270.88400 * 15 14 12 18 18 C 1.53775 * 113.61780 * 205.00111 * 12 11 9 19 19 N 1.36341 * 125.88720 * 299.99852 * 4 2 1 20 20 H 0.96693 * 114.00167 * 300.00090 * 1 2 3 21 21 H 1.08997 * 109.47200 * 120.00372 * 2 1 3 22 22 H 1.48497 * 110.00398 * 178.68212 * 3 2 1 23 23 H 1.48501 * 110.00257 * 300.00131 * 3 2 1 24 24 H 1.07996 * 126.29737 * 359.97438 * 5 4 2 25 25 H 1.07997 * 126.28611 * 179.74054 * 6 5 4 26 26 H 1.09002 * 109.47064 * 34.97337 * 8 7 6 27 27 H 1.08995 * 109.47287 * 154.97568 * 8 7 6 28 28 H 0.97006 * 120.00576 * 0.02562 * 11 9 8 29 29 H 1.08993 * 113.61615 * 203.66798 * 14 12 11 30 30 H 1.08999 * 113.61305 * 334.57372 * 14 12 11 31 31 H 0.96696 * 113.99781 * 277.49182 * 17 15 14 32 32 H 1.09000 * 113.61392 * 25.43254 * 18 12 11 33 33 H 1.09001 * 113.62047 * 156.25341 * 18 12 11 34 34 H 0.97001 * 125.64231 * 0.02562 * 19 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7130 -0.1738 -2.1894 6 6 2.9417 -1.1736 -3.1554 7 6 2.2961 -2.2848 -2.7470 8 6 2.2647 -3.6053 -3.4725 9 6 1.1685 -3.5845 -4.5063 10 8 0.4801 -2.5950 -4.6404 11 7 0.9530 -4.6655 -5.2818 12 6 -0.1131 -4.6455 -6.2865 13 1 -0.8987 -3.9260 -6.0558 14 6 0.4041 -4.5533 -7.7318 15 6 0.4475 -6.0905 -7.7310 16 1 0.1143 -6.5372 -8.6678 17 8 1.6883 -6.6280 -7.2687 18 6 -0.6443 -6.0424 -6.6490 19 7 1.6771 -2.0077 -1.5642 20 1 -0.3933 0.4417 0.7650 21 1 1.7924 -0.5139 0.8899 22 1 3.5346 1.7703 0.0321 23 1 1.5615 2.4679 -1.2085 24 1 3.0902 0.8379 -2.2148 25 1 3.5268 -1.0692 -4.0572 26 1 3.2235 -3.7733 -3.9629 27 1 2.0761 -4.4074 -2.7590 28 1 1.5032 -5.4571 -5.1743 29 1 -0.3223 -4.1374 -8.4299 30 1 1.3867 -4.0889 -7.8151 31 1 2.3788 -6.6609 -7.9448 32 1 -0.5081 -6.7800 -5.8582 33 1 -1.6579 -6.0337 -7.0497 34 1 1.1406 -2.6294 -1.0479 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_14644196.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:54 Heat of formation + Delta-G solvation = -46.673702 kcal Electronic energy + Delta-G solvation = -18526.406855 eV Core-core repulsion = 15427.383777 eV Total energy + Delta-G solvation = -3099.023079 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -42.47905 -41.25354 -39.58030 -37.69289 -36.03840 -34.12061 -32.97668 -32.11783 -29.57112 -26.79290 -25.87280 -24.72046 -22.21325 -21.52602 -21.16430 -20.59413 -18.73514 -18.45422 -18.19734 -17.83708 -16.93077 -16.47647 -16.15573 -15.81179 -15.35204 -15.17660 -15.02314 -14.92980 -14.47767 -14.15507 -13.81950 -13.63320 -13.46403 -13.36884 -12.90546 -12.69418 -12.59796 -12.33465 -12.05454 -11.47672 -11.08563 -10.70551 -10.46202 -10.09217 -9.99409 -9.10158 -4.98912 0.91696 1.26244 1.51948 1.64222 1.71988 2.05165 2.17993 2.36460 3.11009 3.42917 3.47435 3.56123 3.69680 3.83226 3.89324 3.96538 4.10607 4.13350 4.21614 4.30971 4.49571 4.62274 4.68999 4.69484 4.79708 4.87197 4.95280 5.00975 5.03445 5.09272 5.55559 5.80555 5.93471 6.46840 6.56416 6.84104 6.84161 7.20289 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.570 6.570 2 C -0.061 4.061 3 Si 0.818 3.182 4 C 0.020 3.980 5 C -0.228 4.228 6 C -0.200 4.200 7 C 0.037 3.963 8 C -0.064 4.064 9 C 0.509 3.491 10 O -0.581 6.581 11 N -0.694 5.694 12 C 0.109 3.891 13 H 0.076 0.924 14 C -0.183 4.183 15 C 0.086 3.914 16 H 0.088 0.912 17 O -0.565 6.565 18 C -0.135 4.135 19 N -0.530 5.530 20 H 0.406 0.594 21 H 0.099 0.901 22 H -0.287 1.287 23 H -0.309 1.309 24 H 0.128 0.872 25 H 0.141 0.859 26 H 0.144 0.856 27 H 0.132 0.868 28 H 0.418 0.582 29 H 0.105 0.895 30 H 0.066 0.934 31 H 0.400 0.600 32 H 0.081 0.919 33 H 0.123 0.877 34 H 0.423 0.577 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.857 -4.993 2.045 5.463 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.381 6.381 2 C -0.170 4.170 3 Si 0.723 3.277 4 C -0.094 4.094 5 C -0.253 4.253 6 C -0.225 4.225 7 C -0.077 4.077 8 C -0.104 4.104 9 C 0.297 3.703 10 O -0.461 6.461 11 N -0.347 5.347 12 C 0.003 3.997 13 H 0.095 0.905 14 C -0.222 4.222 15 C 0.027 3.973 16 H 0.106 0.894 17 O -0.374 6.374 18 C -0.173 4.173 19 N -0.126 5.126 20 H 0.258 0.742 21 H 0.117 0.883 22 H -0.214 1.214 23 H -0.237 1.237 24 H 0.145 0.855 25 H 0.159 0.841 26 H 0.161 0.839 27 H 0.150 0.850 28 H 0.256 0.744 29 H 0.123 0.877 30 H 0.085 0.915 31 H 0.250 0.750 32 H 0.100 0.900 33 H 0.141 0.859 34 H 0.262 0.738 Dipole moment (debyes) X Y Z Total from point charges 0.513 -4.202 1.647 4.542 hybrid contribution 0.346 -0.739 -0.814 1.152 sum 0.859 -4.941 0.833 5.083 Atomic orbital electron populations 1.86458 1.17439 1.82512 1.51666 1.24642 0.85683 1.11566 0.95109 0.94495 0.76852 0.72859 0.83530 1.20185 1.04109 0.85453 0.99613 1.20703 1.07412 0.99801 0.97395 1.20783 1.07297 0.93067 1.01303 1.19902 1.01222 0.97523 0.89054 1.20233 0.99938 0.93764 0.96459 1.21057 0.84835 0.82415 0.82027 1.90756 1.50115 1.34448 1.70742 1.45592 1.35788 1.17185 1.36111 1.21870 0.90321 0.98980 0.88558 0.90535 1.24140 1.02622 0.98626 0.96852 1.22723 0.85412 0.91730 0.97430 0.89391 1.86308 1.22992 1.84936 1.43170 1.23467 0.99397 0.95281 0.99153 1.41846 1.40645 1.10894 1.19213 0.74199 0.88332 1.21383 1.23743 0.85473 0.84115 0.83860 0.84975 0.74363 0.87698 0.91517 0.74954 0.90048 0.85903 0.73843 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.60 12.86 -148.98 -1.92 -3.52 16 2 C -0.06 -0.15 3.07 71.24 0.22 0.07 16 3 Si 0.82 0.67 30.58 68.60 2.10 2.77 16 4 C 0.02 0.20 6.54 41.08 0.27 0.47 16 5 C -0.23 -2.99 9.37 22.14 0.21 -2.78 16 6 C -0.20 -2.35 10.76 22.14 0.24 -2.11 16 7 C 0.04 0.29 5.66 41.08 0.23 0.52 16 8 C -0.06 0.01 6.24 29.10 0.18 0.19 16 9 C 0.51 3.31 7.82 87.66 0.69 4.00 16 10 O -0.58 -10.26 15.63 -3.04 -0.05 -10.31 16 11 N -0.69 -0.91 5.15 -440.03 -2.27 -3.18 16 12 C 0.11 0.23 4.32 45.52 0.20 0.42 16 13 H 0.08 0.56 7.46 -2.39 -0.02 0.54 16 14 C -0.18 0.17 7.71 31.12 0.24 0.41 16 15 C 0.09 -0.37 5.28 31.12 0.16 -0.21 16 16 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 17 O -0.57 2.54 12.31 -148.98 -1.83 0.71 16 18 C -0.14 0.41 7.66 31.12 0.24 0.65 16 19 N -0.53 -3.94 6.08 -171.12 -1.04 -4.98 16 20 H 0.41 -3.57 8.74 -74.06 -0.65 -4.22 16 21 H 0.10 -0.32 7.96 -2.39 -0.02 -0.33 16 22 H -0.29 -1.70 7.11 99.48 0.71 -0.99 16 23 H -0.31 -3.25 7.11 99.48 0.71 -2.54 16 24 H 0.13 1.59 6.22 -2.91 -0.02 1.57 16 25 H 0.14 1.29 8.06 -2.91 -0.02 1.27 16 26 H 0.14 -0.76 8.14 -2.39 -0.02 -0.78 16 27 H 0.13 -0.86 8.14 -2.39 -0.02 -0.88 16 28 H 0.42 -1.26 7.59 -92.70 -0.70 -1.97 16 29 H 0.10 -0.26 8.14 -2.39 -0.02 -0.27 16 30 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 31 H 0.40 -4.51 9.12 -74.06 -0.68 -5.19 16 32 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 33 H 0.12 -0.74 8.14 -2.39 -0.02 -0.75 16 34 H 0.42 1.03 8.96 -92.71 -0.83 0.20 16 Total: 0.00 -28.21 292.37 -3.79 -32.01 By element: Atomic # 1 Polarization: -13.48 SS G_CDS: -1.66 Total: -15.14 kcal Atomic # 6 Polarization: -1.24 SS G_CDS: 2.87 Total: 1.64 kcal Atomic # 7 Polarization: -4.85 SS G_CDS: -3.31 Total: -8.16 kcal Atomic # 8 Polarization: -9.32 SS G_CDS: -3.80 Total: -13.11 kcal Atomic # 14 Polarization: 0.67 SS G_CDS: 2.10 Total: 2.77 kcal Total: -28.21 -3.79 -32.01 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_14644196.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.668 kcal (2) G-P(sol) polarization free energy of solvation -28.214 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.883 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.791 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.006 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.674 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds