Wall clock time and date at job start Sun Mar 7 2021 22:01:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.47034 * 2 1 4 4 C 1.50697 * 109.47549 * 120.00379 * 2 1 3 5 5 C 1.31109 * 118.54540 * 250.00098 * 4 2 1 6 6 N 1.38928 * 121.84983 * 180.37647 * 5 4 2 7 7 C 1.47034 * 118.88170 * 346.69027 * 6 5 4 8 8 C 1.50700 * 109.82127 * 163.20170 * 7 6 5 9 9 O 1.21280 * 119.99942 * 339.99281 * 8 7 6 10 10 N 1.34772 * 120.00036 * 159.99947 * 8 7 6 11 11 C 1.46501 * 120.00042 * 179.97438 * 10 8 7 12 12 H 1.08998 * 112.84866 * 23.80678 * 11 10 8 13 13 C 1.53787 * 113.61128 * 154.99929 * 11 10 8 14 14 C 1.53784 * 87.07923 * 139.98386 * 13 11 10 15 15 H 1.09002 * 113.61478 * 89.11632 * 14 13 11 16 16 O 1.42894 * 113.61434 * 220.01675 * 14 13 11 17 17 C 1.53779 * 87.08045 * 334.56667 * 14 13 11 18 18 C 1.53538 * 107.66057 * 43.65682 * 7 6 5 19 19 C 1.50209 * 118.54576 * 69.97531 * 4 2 1 20 20 H 0.96694 * 113.99591 * 299.99552 * 1 2 3 21 21 H 1.09006 * 109.46738 * 240.00530 * 2 1 3 22 22 H 1.48498 * 110.00210 * 300.00181 * 3 2 1 23 23 H 1.48496 * 109.99867 * 61.32440 * 3 2 1 24 24 H 1.08000 * 119.07688 * 0.40333 * 5 4 2 25 25 H 0.97001 * 120.56307 * 166.65891 * 6 5 4 26 26 H 1.09007 * 109.81764 * 284.05709 * 7 6 5 27 27 H 0.97005 * 119.99829 * 359.97438 * 10 8 7 28 28 H 1.09004 * 113.61202 * 254.53139 * 13 11 10 29 29 H 1.08994 * 113.61447 * 25.43570 * 13 11 10 30 30 H 0.96701 * 114.00237 * 180.02562 * 16 14 13 31 31 H 1.09006 * 113.61307 * 270.88660 * 17 14 13 32 32 H 1.09007 * 113.61642 * 139.98417 * 17 14 13 33 33 H 1.09006 * 109.62447 * 58.77534 * 18 7 6 34 34 H 1.08996 * 109.62603 * 179.33215 * 18 7 6 35 35 H 1.09005 * 109.32583 * 280.23095 * 19 4 2 36 36 H 1.08997 * 109.32565 * 39.71602 * 19 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 1.2304 5 6 2.5117 -0.0029 2.1693 6 7 3.0068 -0.5881 3.3280 7 6 2.6222 -1.9714 3.6452 8 6 3.5614 -2.5388 4.6782 9 8 4.6507 -2.0339 4.8498 10 7 3.1908 -3.6073 5.4113 11 6 4.1040 -4.1592 6.4151 12 1 4.8320 -3.4303 6.7714 13 6 3.3903 -4.9199 7.5451 14 6 4.5325 -5.9469 7.4685 15 1 5.3786 -5.7077 8.1128 16 8 4.0952 -7.3005 7.6043 17 6 4.7260 -5.5055 6.0082 18 6 2.7170 -2.7900 2.3497 19 6 1.7448 -2.1978 1.3269 20 1 -0.3932 0.4416 0.7651 21 1 1.7923 -0.5138 -0.8901 22 1 1.5615 2.4680 -1.2084 23 1 1.5880 2.4585 1.2243 24 1 2.6071 1.0649 2.0386 25 1 3.5966 -0.0927 3.9176 26 1 1.6001 -1.9933 4.0234 27 1 2.3195 -4.0109 5.2742 28 1 3.3577 -4.3726 8.4872 29 1 2.4202 -5.3234 7.2550 30 1 4.8091 -7.9510 7.5574 31 1 4.1209 -6.0691 5.2979 32 1 5.7716 -5.4309 5.7095 33 1 3.7336 -2.7411 1.9594 34 1 2.4490 -3.8270 2.5515 35 1 0.7216 -2.4137 1.6346 36 1 1.9284 -2.6484 0.3516 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_15413834.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:01:57 Heat of formation + Delta-G solvation = -70.602101 kcal Electronic energy + Delta-G solvation = -19142.538975 eV Core-core repulsion = 16015.166804 eV Total energy + Delta-G solvation = -3127.372171 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.130 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.59518 -40.28887 -39.21752 -37.47490 -36.38536 -34.23168 -33.22863 -32.71318 -27.77779 -26.79309 -25.63733 -24.86729 -23.52051 -21.76885 -20.99240 -19.40915 -19.09871 -18.68704 -18.05570 -17.21535 -16.83900 -16.33895 -16.27072 -16.00472 -15.72747 -15.26827 -15.20638 -14.63668 -14.51639 -14.14916 -13.97224 -13.64564 -13.51183 -13.02749 -12.94416 -12.72253 -12.40304 -12.30346 -11.96505 -11.74982 -11.64159 -11.26539 -10.98913 -10.76100 -10.30070 -10.15343 -8.47382 -4.89048 1.30942 1.39911 1.43692 1.56671 1.86231 1.98687 2.62303 3.30575 3.39624 3.53288 3.57270 3.66219 3.78374 3.80479 3.87771 3.94651 4.02677 4.29746 4.43614 4.47876 4.61678 4.69902 4.72677 4.73255 4.76065 4.91999 4.94156 5.02056 5.08517 5.23220 5.29457 5.44492 5.56889 6.22631 6.42351 6.64797 6.81178 6.85083 7.06110 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.056 4.056 3 Si 0.744 3.256 4 C -0.282 4.282 5 C 0.138 3.862 6 N -0.736 5.736 7 C 0.138 3.862 8 C 0.515 3.485 9 O -0.571 6.571 10 N -0.701 5.701 11 C 0.121 3.879 12 H 0.106 0.894 13 C -0.132 4.132 14 C 0.079 3.921 15 H 0.099 0.901 16 O -0.577 6.577 17 C -0.178 4.178 18 C -0.120 4.120 19 C -0.052 4.052 20 H 0.382 0.618 21 H 0.111 0.889 22 H -0.311 1.311 23 H -0.283 1.283 24 H 0.142 0.858 25 H 0.408 0.592 26 H 0.108 0.892 27 H 0.418 0.582 28 H 0.088 0.912 29 H 0.099 0.901 30 H 0.396 0.604 31 H 0.093 0.907 32 H 0.071 0.929 33 H 0.062 0.938 34 H 0.096 0.904 35 H 0.068 0.932 36 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.729 -2.873 2.601 3.944 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.166 4.166 3 Si 0.652 3.348 4 C -0.292 4.292 5 C 0.017 3.983 6 N -0.369 5.369 7 C 0.029 3.971 8 C 0.301 3.699 9 O -0.450 6.450 10 N -0.353 5.353 11 C 0.016 3.984 12 H 0.124 0.876 13 C -0.170 4.170 14 C 0.019 3.981 15 H 0.116 0.884 16 O -0.385 6.385 17 C -0.217 4.217 18 C -0.159 4.159 19 C -0.089 4.089 20 H 0.231 0.769 21 H 0.129 0.871 22 H -0.240 1.240 23 H -0.210 1.210 24 H 0.159 0.841 25 H 0.244 0.756 26 H 0.125 0.875 27 H 0.255 0.745 28 H 0.107 0.893 29 H 0.117 0.883 30 H 0.247 0.753 31 H 0.111 0.889 32 H 0.090 0.910 33 H 0.081 0.919 34 H 0.115 0.885 35 H 0.087 0.913 36 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 0.758 -1.845 2.268 3.020 hybrid contribution -0.627 -0.231 0.495 0.832 sum 0.130 -2.076 2.763 3.458 Atomic orbital electron populations 1.86544 1.19613 1.80206 1.50055 1.24855 0.82702 1.09928 0.99152 0.94419 0.90979 0.73588 0.75784 1.20914 1.13933 0.96524 0.97864 1.20611 0.94849 0.96871 0.85992 1.44377 1.54766 1.12656 1.25107 1.21097 0.97570 0.84063 0.94392 1.20887 0.87347 0.80113 0.81527 1.90717 1.24090 1.61307 1.68883 1.45797 1.20699 1.31065 1.37691 1.22209 0.93180 0.93968 0.89046 0.87600 1.23444 0.99242 0.95382 0.98954 1.23148 0.97590 0.82076 0.95267 0.88363 1.86470 1.39718 1.16448 1.95873 1.24151 1.02112 0.96650 0.98772 1.21830 1.00889 0.99539 0.93645 1.19945 0.98592 0.91360 0.98987 0.76933 0.87112 1.23982 1.21012 0.84087 0.75599 0.87463 0.74493 0.89326 0.88261 0.75330 0.88851 0.90994 0.91897 0.88519 0.91324 0.90831 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.04 12.88 -148.98 -1.92 -3.96 16 2 C -0.06 -0.03 2.81 71.24 0.20 0.17 16 3 Si 0.74 -0.23 29.97 68.60 2.06 1.82 16 4 C -0.28 0.08 5.37 -16.75 -0.09 -0.01 16 5 C 0.14 -0.11 9.61 83.42 0.80 0.69 16 6 N -0.74 0.10 5.46 -328.99 -1.80 -1.70 16 7 C 0.14 -0.33 3.36 44.32 0.15 -0.18 16 8 C 0.51 0.43 7.08 87.66 0.62 1.05 16 9 O -0.57 -5.19 15.70 -3.03 -0.05 -5.23 16 10 N -0.70 2.84 5.35 -440.04 -2.36 0.48 16 11 C 0.12 -0.33 4.24 45.52 0.19 -0.14 16 12 H 0.11 0.06 7.46 -2.39 -0.02 0.04 16 13 C -0.13 0.60 7.66 31.12 0.24 0.84 16 14 C 0.08 -0.31 5.21 31.12 0.16 -0.15 16 15 H 0.10 -0.62 8.14 -2.39 -0.02 -0.64 16 16 O -0.58 0.93 13.67 -148.98 -2.04 -1.11 16 17 C -0.18 0.59 7.71 31.12 0.24 0.83 16 18 C -0.12 0.35 5.47 30.79 0.17 0.52 16 19 C -0.05 0.08 5.85 29.71 0.17 0.25 16 20 H 0.38 -0.79 8.70 -74.06 -0.64 -1.43 16 21 H 0.11 0.01 7.96 -2.38 -0.02 -0.01 16 22 H -0.31 -2.56 7.11 99.48 0.71 -1.85 16 23 H -0.28 -0.74 6.82 99.48 0.68 -0.06 16 24 H 0.14 -0.42 4.31 -2.91 -0.01 -0.43 16 25 H 0.41 0.24 8.12 -92.71 -0.75 -0.51 16 26 H 0.11 -0.63 8.14 -2.38 -0.02 -0.65 16 27 H 0.42 -3.89 8.73 -92.70 -0.81 -4.70 16 28 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 29 H 0.10 -0.48 8.12 -2.39 -0.02 -0.50 16 30 H 0.40 -3.61 9.12 -74.06 -0.68 -4.29 16 31 H 0.09 -0.27 8.14 -2.38 -0.02 -0.29 16 32 H 0.07 -0.16 8.14 -2.38 -0.02 -0.18 16 33 H 0.06 0.05 8.14 -2.38 -0.02 0.03 16 34 H 0.10 -0.65 8.14 -2.39 -0.02 -0.67 16 35 H 0.07 -0.12 8.14 -2.38 -0.02 -0.14 16 36 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 Total: 0.00 -17.70 297.14 -4.98 -22.68 By element: Atomic # 1 Polarization: -15.12 SS G_CDS: -1.74 Total: -16.86 kcal Atomic # 6 Polarization: 1.02 SS G_CDS: 2.86 Total: 3.87 kcal Atomic # 7 Polarization: 2.94 SS G_CDS: -4.15 Total: -1.22 kcal Atomic # 8 Polarization: -6.30 SS G_CDS: -4.00 Total: -10.30 kcal Atomic # 14 Polarization: -0.23 SS G_CDS: 2.06 Total: 1.82 kcal Total: -17.70 -4.98 -22.68 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_15413834.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.922 kcal (2) G-P(sol) polarization free energy of solvation -17.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.620 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.982 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.680 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.602 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds