Wall clock time and date at job start Sun Mar 7 2021 22:02:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86295 * 109.47237 * 2 1 4 4 C 1.50700 * 109.47003 * 239.99876 * 2 1 3 5 5 C 1.31116 * 118.54362 * 109.98342 * 4 2 1 6 6 N 1.38927 * 121.84232 * 180.42472 * 5 4 2 7 7 C 1.47032 * 118.88908 * 346.68332 * 6 5 4 8 8 C 1.53543 * 107.65576 * 43.66576 * 7 6 5 9 9 C 1.50205 * 118.54521 * 290.00148 * 4 2 1 10 10 C 1.50691 * 109.33200 * 39.66651 * 9 4 2 11 11 O 1.21289 * 120.00113 * 120.85884 * 10 9 4 12 12 N 1.34773 * 120.00316 * 300.86157 * 10 9 4 13 13 C 1.46501 * 120.00122 * 179.97438 * 12 10 9 14 14 H 1.08993 * 112.90929 * 336.25213 * 13 12 10 15 15 C 1.53962 * 113.66387 * 107.55425 * 13 12 10 16 16 C 1.53782 * 87.11063 * 139.88885 * 15 13 12 17 17 H 1.08997 * 113.61225 * 89.18406 * 16 15 13 18 18 O 1.42900 * 113.68763 * 220.07839 * 16 15 13 19 19 C 1.53781 * 87.08260 * 334.63747 * 16 15 13 20 20 H 0.96699 * 113.99353 * 59.99871 * 1 2 3 21 21 H 1.09006 * 109.46864 * 120.00040 * 2 1 3 22 22 H 1.48499 * 110.00132 * 60.00151 * 3 2 1 23 23 H 1.48504 * 109.99744 * 181.31635 * 3 2 1 24 24 H 1.07991 * 119.07681 * 0.42628 * 5 4 2 25 25 H 0.97002 * 120.55221 * 166.65904 * 6 5 4 26 26 H 1.08998 * 109.81808 * 284.12529 * 7 6 5 27 27 H 1.08998 * 109.82154 * 163.20157 * 7 6 5 28 28 H 1.09000 * 109.61982 * 179.33171 * 8 7 6 29 29 H 1.08996 * 109.77773 * 58.86367 * 8 7 6 30 30 H 1.09003 * 109.18808 * 280.09439 * 9 4 2 31 31 H 0.97002 * 120.00080 * 0.02562 * 12 10 9 32 32 H 1.08997 * 113.53543 * 25.33559 * 15 13 12 33 33 H 1.08998 * 113.73879 * 254.47157 * 15 13 12 34 34 H 0.96705 * 114.00018 * 277.53252 * 18 16 15 35 35 H 1.09002 * 113.61445 * 139.98212 * 19 16 15 36 36 H 1.09002 * 113.61408 * 270.79943 * 19 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.5113 -0.0028 -2.1696 6 7 2.9916 -0.5858 -3.3356 7 6 3.1169 -2.0494 -3.3985 8 6 1.8453 -2.6525 -2.7847 9 6 1.7451 -2.1978 -1.3268 10 6 0.3900 -2.5672 -0.7811 11 8 -0.4140 -3.1369 -1.4884 12 7 0.0711 -2.2646 0.4930 13 6 -1.2466 -2.6233 1.0234 14 1 -2.0004 -2.7383 0.2446 15 6 -1.2122 -3.7912 2.0259 16 6 -2.2544 -3.0145 2.8476 17 1 -3.2843 -3.2367 2.5684 18 8 -2.0359 -3.0771 4.2584 19 6 -1.7013 -1.7367 2.1948 20 1 -0.3932 0.4417 -0.7651 21 1 1.7924 -0.5139 0.8900 22 1 1.5616 2.4678 1.2085 23 1 3.5347 1.7701 -0.0321 24 1 2.6186 1.0631 -2.0329 25 1 3.2398 -0.0364 -4.0956 26 1 3.9899 -2.3703 -2.8301 27 1 3.2132 -2.3678 -4.4365 28 1 1.8994 -3.7404 -2.8259 29 1 0.9705 -2.3084 -3.3364 30 1 2.5180 -2.6944 -0.7401 31 1 0.7139 -1.8086 1.0586 32 1 -0.2529 -3.9030 2.5311 33 1 -1.5882 -4.7299 1.6190 34 1 -2.3817 -3.8786 4.6747 35 1 -2.4727 -1.0160 1.9231 36 1 -0.8766 -1.2860 2.7470 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_15608500.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:00 Heat of formation + Delta-G solvation = -49.601574 kcal Electronic energy + Delta-G solvation = -20275.309705 eV Core-core repulsion = 17148.848185 eV Total energy + Delta-G solvation = -3126.461519 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.130 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -41.51463 -40.13199 -38.74997 -37.63729 -36.12960 -33.90420 -32.99034 -32.70686 -27.43953 -26.63845 -26.32307 -24.39964 -23.23674 -21.45949 -20.79433 -19.36526 -18.92175 -18.64265 -17.81007 -17.33755 -16.76836 -16.28336 -16.06870 -15.87953 -15.48876 -15.13359 -14.99146 -14.59201 -14.34839 -13.97709 -13.71984 -13.51652 -13.35732 -13.16331 -12.72792 -12.44133 -12.10348 -12.02136 -11.96254 -11.82779 -11.60317 -11.43048 -10.79517 -10.43838 -10.27535 -9.54015 -8.54970 -5.06151 1.21698 1.30541 1.60691 1.96036 2.03017 2.45097 2.51119 3.36707 3.50574 3.63528 3.64141 3.73045 3.81222 3.95305 4.01027 4.03840 4.22271 4.26202 4.36336 4.47052 4.53680 4.62729 4.72435 4.79401 4.83507 4.85772 5.05793 5.11143 5.16427 5.29857 5.32846 5.38577 5.82609 6.19976 6.65361 6.72626 6.74175 6.85622 7.57381 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.050 4.050 3 Si 0.673 3.327 4 C -0.286 4.286 5 C 0.160 3.840 6 N -0.748 5.748 7 C 0.119 3.881 8 C -0.118 4.118 9 C -0.041 4.041 10 C 0.534 3.466 11 O -0.551 6.551 12 N -0.690 5.690 13 C 0.136 3.864 14 H 0.113 0.887 15 C -0.186 4.186 16 C 0.075 3.925 17 H 0.085 0.915 18 O -0.559 6.559 19 C -0.125 4.125 20 H 0.373 0.627 21 H 0.101 0.899 22 H -0.256 1.256 23 H -0.261 1.261 24 H 0.132 0.868 25 H 0.404 0.596 26 H 0.061 0.939 27 H 0.083 0.917 28 H 0.079 0.921 29 H 0.081 0.919 30 H 0.090 0.910 31 H 0.399 0.601 32 H 0.089 0.911 33 H 0.072 0.928 34 H 0.379 0.621 35 H 0.080 0.920 36 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.998 1.841 -2.271 3.541 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.163 4.163 3 Si 0.576 3.424 4 C -0.297 4.297 5 C 0.038 3.962 6 N -0.378 5.378 7 C -0.005 4.005 8 C -0.157 4.157 9 C -0.062 4.062 10 C 0.321 3.679 11 O -0.429 6.429 12 N -0.342 5.342 13 C 0.030 3.970 14 H 0.131 0.869 15 C -0.226 4.226 16 C 0.015 3.985 17 H 0.103 0.897 18 O -0.365 6.365 19 C -0.163 4.163 20 H 0.220 0.780 21 H 0.118 0.882 22 H -0.181 1.181 23 H -0.186 1.186 24 H 0.149 0.851 25 H 0.238 0.762 26 H 0.079 0.921 27 H 0.102 0.898 28 H 0.097 0.903 29 H 0.100 0.900 30 H 0.108 0.892 31 H 0.237 0.763 32 H 0.107 0.893 33 H 0.091 0.909 34 H 0.226 0.774 35 H 0.098 0.902 36 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 2.307 2.162 -1.894 3.686 hybrid contribution 0.332 -0.690 0.364 0.848 sum 2.639 1.473 -1.529 3.387 Atomic orbital electron populations 1.86648 1.16902 1.81191 1.49170 1.24668 0.85735 1.08725 0.97146 0.95022 0.80788 0.78823 0.87768 1.20595 1.13472 0.94943 1.00707 1.20311 0.93078 0.95964 0.86886 1.44597 1.71903 1.06507 1.14797 1.21657 0.97335 0.80031 1.01503 1.21702 0.98661 1.01079 0.94249 1.19692 0.95079 0.93709 0.97736 1.20289 0.88765 0.77360 0.81488 1.90681 1.51454 1.42629 1.58179 1.45906 1.16066 1.59441 1.12781 1.22011 0.86570 0.94358 0.94060 0.86870 1.24264 1.00936 0.99024 0.98339 1.23165 0.97288 0.97611 0.80411 0.89749 1.86524 1.83163 1.46255 1.20523 1.23320 1.01598 0.96206 0.95156 0.77952 0.88204 1.18148 1.18649 0.85103 0.76189 0.92127 0.89847 0.90262 0.90003 0.89242 0.76285 0.89260 0.90934 0.77360 0.90159 0.89057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.57 9.42 -35.23 -0.33 0.24 16 2 C -0.05 0.08 1.73 36.01 0.06 0.14 16 3 Si 0.67 -1.25 29.72 -169.99 -5.05 -6.30 16 4 C -0.29 0.28 5.15 -101.34 -0.52 -0.25 16 5 C 0.16 -0.31 9.62 -16.08 -0.15 -0.46 16 6 N -0.75 1.73 5.83 -60.68 -0.35 1.38 16 7 C 0.12 -0.23 7.16 -3.47 -0.02 -0.25 16 8 C -0.12 -0.03 4.91 -26.43 -0.13 -0.16 16 9 C -0.04 -0.02 2.75 -93.14 -0.26 -0.27 16 10 C 0.53 1.47 6.39 -10.99 -0.07 1.40 16 11 O -0.55 -3.61 15.40 5.55 0.09 -3.53 16 12 N -0.69 -0.78 3.01 -52.93 -0.16 -0.94 16 13 C 0.14 0.18 4.19 -67.02 -0.28 -0.10 16 14 H 0.11 0.31 7.47 -51.93 -0.39 -0.08 16 15 C -0.19 -0.16 7.72 -25.82 -0.20 -0.36 16 16 C 0.07 0.04 5.21 -25.92 -0.14 -0.09 16 17 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 18 O -0.56 -0.85 13.67 -35.23 -0.48 -1.33 16 19 C -0.12 -0.10 7.66 -25.92 -0.20 -0.30 16 20 H 0.37 -1.19 8.70 45.56 0.40 -0.80 16 21 H 0.10 -0.15 6.39 -51.93 -0.33 -0.48 16 22 H -0.26 -0.48 7.11 56.52 0.40 -0.07 16 23 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 24 H 0.13 -0.51 4.48 -52.49 -0.24 -0.75 16 25 H 0.40 -1.69 8.96 -40.82 -0.37 -2.06 16 26 H 0.06 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 28 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 29 H 0.08 0.18 7.76 -51.93 -0.40 -0.22 16 30 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.40 0.03 5.57 -40.82 -0.23 -0.20 16 32 H 0.09 0.12 8.14 -51.93 -0.42 -0.30 16 33 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 34 H 0.38 -0.93 9.12 45.56 0.42 -0.52 16 35 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 36 H 0.09 0.14 8.12 -51.93 -0.42 -0.28 16 LS Contribution 285.45 15.07 4.30 4.30 Total: 0.00 -7.69 285.45 -8.04 -15.73 By element: Atomic # 1 Polarization: -4.72 SS G_CDS: -4.14 Total: -8.86 kcal Atomic # 6 Polarization: 1.21 SS G_CDS: -1.91 Total: -0.70 kcal Atomic # 7 Polarization: 0.95 SS G_CDS: -0.51 Total: 0.44 kcal Atomic # 8 Polarization: -3.89 SS G_CDS: -0.73 Total: -4.62 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.05 Total: -6.30 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -7.69 -8.04 -15.73 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_15608500.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.868 kcal (2) G-P(sol) polarization free energy of solvation -7.693 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.562 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.733 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.602 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds