Wall clock time and date at job start Sun Mar 7 2021 22:02:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86295 * 109.47237 * 2 1 4 4 C 1.50700 * 109.47003 * 239.99876 * 2 1 3 5 5 C 1.31116 * 118.54362 * 109.98342 * 4 2 1 6 6 N 1.38927 * 121.84232 * 180.42472 * 5 4 2 7 7 C 1.47032 * 118.88908 * 346.68332 * 6 5 4 8 8 C 1.53543 * 107.65576 * 43.66576 * 7 6 5 9 9 C 1.50205 * 118.54521 * 290.00148 * 4 2 1 10 10 C 1.50691 * 109.33200 * 39.66651 * 9 4 2 11 11 O 1.21289 * 120.00113 * 120.85884 * 10 9 4 12 12 N 1.34773 * 120.00316 * 300.86157 * 10 9 4 13 13 C 1.46501 * 120.00122 * 179.97438 * 12 10 9 14 14 H 1.08993 * 112.90929 * 336.25213 * 13 12 10 15 15 C 1.53962 * 113.66387 * 107.55425 * 13 12 10 16 16 C 1.53782 * 87.11063 * 139.88885 * 15 13 12 17 17 H 1.08997 * 113.61225 * 89.18406 * 16 15 13 18 18 O 1.42900 * 113.68763 * 220.07839 * 16 15 13 19 19 C 1.53781 * 87.08260 * 334.63747 * 16 15 13 20 20 H 0.96699 * 113.99353 * 59.99871 * 1 2 3 21 21 H 1.09006 * 109.46864 * 120.00040 * 2 1 3 22 22 H 1.48499 * 110.00132 * 60.00151 * 3 2 1 23 23 H 1.48504 * 109.99744 * 181.31635 * 3 2 1 24 24 H 1.07991 * 119.07681 * 0.42628 * 5 4 2 25 25 H 0.97002 * 120.55221 * 166.65904 * 6 5 4 26 26 H 1.08998 * 109.81808 * 284.12529 * 7 6 5 27 27 H 1.08998 * 109.82154 * 163.20157 * 7 6 5 28 28 H 1.09000 * 109.61982 * 179.33171 * 8 7 6 29 29 H 1.08996 * 109.77773 * 58.86367 * 8 7 6 30 30 H 1.09003 * 109.18808 * 280.09439 * 9 4 2 31 31 H 0.97002 * 120.00080 * 0.02562 * 12 10 9 32 32 H 1.08997 * 113.53543 * 25.33559 * 15 13 12 33 33 H 1.08998 * 113.73879 * 254.47157 * 15 13 12 34 34 H 0.96705 * 114.00018 * 277.53252 * 18 16 15 35 35 H 1.09002 * 113.61445 * 139.98212 * 19 16 15 36 36 H 1.09002 * 113.61408 * 270.79943 * 19 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.5113 -0.0028 -2.1696 6 7 2.9916 -0.5858 -3.3356 7 6 3.1169 -2.0494 -3.3985 8 6 1.8453 -2.6525 -2.7847 9 6 1.7451 -2.1978 -1.3268 10 6 0.3900 -2.5672 -0.7811 11 8 -0.4140 -3.1369 -1.4884 12 7 0.0711 -2.2646 0.4930 13 6 -1.2466 -2.6233 1.0234 14 1 -2.0004 -2.7383 0.2446 15 6 -1.2122 -3.7912 2.0259 16 6 -2.2544 -3.0145 2.8476 17 1 -3.2843 -3.2367 2.5684 18 8 -2.0359 -3.0771 4.2584 19 6 -1.7013 -1.7367 2.1948 20 1 -0.3932 0.4417 -0.7651 21 1 1.7924 -0.5139 0.8900 22 1 1.5616 2.4678 1.2085 23 1 3.5347 1.7701 -0.0321 24 1 2.6186 1.0631 -2.0329 25 1 3.2398 -0.0364 -4.0956 26 1 3.9899 -2.3703 -2.8301 27 1 3.2132 -2.3678 -4.4365 28 1 1.8994 -3.7404 -2.8259 29 1 0.9705 -2.3084 -3.3364 30 1 2.5180 -2.6944 -0.7401 31 1 0.7139 -1.8086 1.0586 32 1 -0.2529 -3.9030 2.5311 33 1 -1.5882 -4.7299 1.6190 34 1 -2.3817 -3.8786 4.6747 35 1 -2.4727 -1.0160 1.9231 36 1 -0.8766 -1.2860 2.7470 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_15608500.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:00 Heat of formation + Delta-G solvation = -52.979007 kcal Electronic energy + Delta-G solvation = -20275.456161 eV Core-core repulsion = 17148.848185 eV Total energy + Delta-G solvation = -3126.607976 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.130 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -41.60596 -40.15983 -38.86188 -37.56013 -36.23422 -34.01021 -32.99555 -32.62960 -27.40993 -26.73248 -26.27700 -24.42631 -23.17939 -21.61157 -20.87273 -19.28775 -18.86231 -18.70646 -17.91797 -17.29320 -16.82370 -16.31476 -16.12530 -15.82594 -15.54997 -15.09582 -15.03361 -14.56345 -14.38589 -14.00929 -13.75495 -13.62063 -13.46740 -13.14701 -12.67855 -12.56008 -12.18496 -12.10550 -11.94869 -11.78172 -11.67469 -11.35220 -10.89496 -10.61732 -10.22672 -9.68632 -8.41919 -4.95020 1.31485 1.41419 1.67602 1.83857 2.04209 2.36170 2.68834 3.35754 3.53646 3.61729 3.69122 3.72986 3.84912 3.91118 3.95233 4.04687 4.22545 4.36548 4.39131 4.54311 4.56883 4.65602 4.72557 4.75703 4.80319 4.86292 4.97006 5.03155 5.21643 5.24899 5.28527 5.47762 5.68315 6.33341 6.69759 6.84698 6.87840 7.00151 7.39957 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.053 4.053 3 Si 0.763 3.237 4 C -0.302 4.302 5 C 0.165 3.835 6 N -0.746 5.746 7 C 0.122 3.878 8 C -0.116 4.116 9 C -0.039 4.039 10 C 0.532 3.468 11 O -0.595 6.595 12 N -0.680 5.680 13 C 0.133 3.867 14 H 0.099 0.901 15 C -0.182 4.182 16 C 0.078 3.922 17 H 0.099 0.901 18 O -0.577 6.577 19 C -0.120 4.120 20 H 0.383 0.617 21 H 0.099 0.901 22 H -0.308 1.308 23 H -0.291 1.291 24 H 0.153 0.847 25 H 0.415 0.585 26 H 0.065 0.935 27 H 0.099 0.901 28 H 0.072 0.928 29 H 0.060 0.940 30 H 0.096 0.904 31 H 0.405 0.595 32 H 0.085 0.915 33 H 0.070 0.930 34 H 0.395 0.605 35 H 0.084 0.916 36 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.562 2.354 -2.542 4.309 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.164 4.164 3 Si 0.671 3.329 4 C -0.313 4.313 5 C 0.042 3.958 6 N -0.376 5.376 7 C -0.003 4.003 8 C -0.155 4.155 9 C -0.060 4.060 10 C 0.320 3.680 11 O -0.476 6.476 12 N -0.331 5.331 13 C 0.027 3.973 14 H 0.117 0.883 15 C -0.221 4.221 16 C 0.019 3.981 17 H 0.117 0.883 18 O -0.385 6.385 19 C -0.158 4.158 20 H 0.232 0.768 21 H 0.116 0.884 22 H -0.236 1.236 23 H -0.218 1.218 24 H 0.170 0.830 25 H 0.251 0.749 26 H 0.083 0.917 27 H 0.117 0.883 28 H 0.090 0.910 29 H 0.078 0.922 30 H 0.114 0.886 31 H 0.245 0.755 32 H 0.103 0.897 33 H 0.089 0.911 34 H 0.245 0.755 35 H 0.102 0.898 36 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 2.874 2.668 -2.172 4.483 hybrid contribution 0.149 -0.853 0.495 0.997 sum 3.023 1.815 -1.677 3.905 Atomic orbital electron populations 1.86616 1.17252 1.81517 1.49917 1.24758 0.85557 1.09136 0.96990 0.94006 0.77396 0.76246 0.85288 1.20521 1.15071 0.94137 1.01556 1.20583 0.91880 0.96867 0.86458 1.44672 1.71355 1.06527 1.15084 1.21656 0.96082 0.80196 1.02322 1.21642 0.98946 1.00785 0.94098 1.19694 0.93628 0.94959 0.97751 1.20727 0.89277 0.76531 0.81454 1.90655 1.52966 1.44743 1.59272 1.45876 1.16070 1.58737 1.12452 1.21963 0.86379 0.95077 0.93852 0.88325 1.24206 1.00974 0.98794 0.98147 1.23200 0.97812 0.96992 0.80101 0.88311 1.86478 1.83572 1.47607 1.20893 1.23256 1.01464 0.96385 0.94685 0.76817 0.88383 1.23638 1.21820 0.83046 0.74893 0.91676 0.88292 0.90978 0.92168 0.88648 0.75544 0.89687 0.91077 0.75496 0.89784 0.89672 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.99 9.42 -148.98 -1.40 -0.42 16 2 C -0.05 0.16 1.73 71.24 0.12 0.29 16 3 Si 0.76 -2.98 29.72 68.60 2.04 -0.94 16 4 C -0.30 0.64 5.15 -16.76 -0.09 0.55 16 5 C 0.16 -0.80 9.62 83.41 0.80 0.00 16 6 N -0.75 4.31 5.83 -345.90 -2.02 2.29 16 7 C 0.12 -0.55 7.16 86.46 0.62 0.07 16 8 C -0.12 -0.14 4.91 30.79 0.15 0.01 16 9 C -0.04 -0.06 2.75 -12.43 -0.03 -0.09 16 10 C 0.53 3.62 6.39 87.65 0.56 4.18 16 11 O -0.59 -8.97 15.40 -3.06 -0.05 -9.01 16 12 N -0.68 -2.22 3.01 -439.75 -1.32 -3.54 16 13 C 0.13 0.50 4.19 45.58 0.19 0.69 16 14 H 0.10 0.70 7.47 -2.39 -0.02 0.68 16 15 C -0.18 -0.44 7.72 31.18 0.24 -0.20 16 16 C 0.08 0.09 5.21 31.12 0.16 0.25 16 17 H 0.10 -0.17 8.14 -2.39 -0.02 -0.19 16 18 O -0.58 -1.63 13.67 -148.98 -2.04 -3.67 16 19 C -0.12 -0.24 7.66 31.12 0.24 0.00 16 20 H 0.38 -2.43 8.70 -74.06 -0.64 -3.07 16 21 H 0.10 -0.28 6.39 -2.38 -0.02 -0.30 16 22 H -0.31 -1.49 7.11 99.48 0.71 -0.78 16 23 H -0.29 -0.34 7.11 99.48 0.71 0.37 16 24 H 0.15 -1.44 4.48 -2.92 -0.01 -1.45 16 25 H 0.41 -4.13 8.96 -92.71 -0.83 -4.96 16 26 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 27 H 0.10 -0.74 8.14 -2.39 -0.02 -0.76 16 28 H 0.07 0.16 8.14 -2.39 -0.02 0.14 16 29 H 0.06 0.35 7.76 -2.39 -0.02 0.33 16 30 H 0.10 -0.01 8.14 -2.39 -0.02 -0.03 16 31 H 0.41 0.33 5.57 -92.71 -0.52 -0.19 16 32 H 0.08 0.28 8.14 -2.39 -0.02 0.26 16 33 H 0.07 0.19 8.14 -2.39 -0.02 0.17 16 34 H 0.40 -2.09 9.12 -74.05 -0.68 -2.76 16 35 H 0.08 0.11 8.14 -2.39 -0.02 0.09 16 36 H 0.08 0.30 8.12 -2.39 -0.02 0.28 16 Total: 0.00 -18.75 285.45 -3.31 -22.06 By element: Atomic # 1 Polarization: -11.03 SS G_CDS: -1.49 Total: -12.52 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: 2.97 Total: 5.75 kcal Atomic # 7 Polarization: 2.09 SS G_CDS: -3.34 Total: -1.25 kcal Atomic # 8 Polarization: -9.61 SS G_CDS: -3.49 Total: -13.10 kcal Atomic # 14 Polarization: -2.98 SS G_CDS: 2.04 Total: -0.94 kcal Total: -18.75 -3.31 -22.06 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_15608500.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.918 kcal (2) G-P(sol) polarization free energy of solvation -18.751 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.669 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.310 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.061 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.979 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds