Wall clock time and date at job start Sun Mar 7 2021 22:02:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47222 * 2 1 4 4 C 1.50697 * 109.46774 * 239.99933 * 2 1 3 5 5 C 1.34494 * 125.49354 * 149.97884 * 4 2 1 6 6 C 1.46751 * 106.36805 * 180.02562 * 5 4 2 7 7 C 1.47259 * 126.97302 * 179.97438 * 6 5 4 8 8 O 1.21625 * 120.00180 * 180.02562 * 7 6 5 9 9 N 1.34779 * 120.00000 * 0.02581 * 7 6 5 10 10 C 1.46496 * 120.00475 * 179.97438 * 9 7 6 11 11 H 1.09002 * 112.84555 * 334.66730 * 10 9 7 12 12 C 1.53777 * 113.61471 * 105.86225 * 10 9 7 13 13 C 1.54044 * 86.98500 * 89.16655 * 12 10 9 14 14 H 1.09006 * 113.70103 * 139.99250 * 13 12 10 15 15 O 1.42902 * 113.61234 * 270.88166 * 13 12 10 16 16 C 1.53773 * 87.08045 * 25.43108 * 13 12 10 17 17 C 1.36336 * 106.05683 * 359.97438 * 6 5 4 18 18 C 1.51004 * 126.78642 * 180.02562 * 17 6 5 19 19 C 1.53393 * 108.24810 * 164.27227 * 18 17 6 20 20 C 1.53190 * 109.03172 * 48.49090 * 19 18 17 21 21 C 1.53133 * 109.51886 * 290.41065 * 20 19 18 22 22 N 1.35203 * 108.66602 * 0.02562 * 17 6 5 23 23 H 0.96700 * 113.99930 * 59.99455 * 1 2 3 24 24 H 1.08998 * 109.46747 * 120.00246 * 2 1 3 25 25 H 1.48497 * 110.00208 * 60.00137 * 3 2 1 26 26 H 1.48494 * 110.00086 * 181.32277 * 3 2 1 27 27 H 1.07997 * 126.81757 * 359.97438 * 5 4 2 28 28 H 0.97001 * 119.99453 * 0.02562 * 9 7 6 29 29 H 1.08999 * 113.61448 * 203.66803 * 12 10 9 30 30 H 1.09001 * 113.61765 * 334.56964 * 12 10 9 31 31 H 0.96696 * 114.00130 * 277.49519 * 15 13 12 32 32 H 1.09006 * 113.61667 * 220.02519 * 16 13 12 33 33 H 1.08999 * 113.61565 * 89.11832 * 16 13 12 34 34 H 1.08993 * 109.70656 * 283.96090 * 18 17 6 35 35 H 1.09004 * 109.71023 * 44.54206 * 18 17 6 36 36 H 1.09004 * 109.54552 * 168.34571 * 19 18 17 37 37 H 1.09006 * 109.54473 * 288.52487 * 19 18 17 38 38 H 1.08998 * 109.45788 * 170.40297 * 20 19 18 39 39 H 1.09004 * 109.47287 * 50.42852 * 20 19 18 40 40 H 1.08999 * 109.56557 * 291.16548 * 21 20 19 41 41 H 1.08998 * 109.56037 * 170.82047 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 3.0854 -0.4461 -1.8683 6 6 3.1547 -1.3770 -3.0007 7 6 4.2322 -1.4783 -3.9993 8 8 4.1590 -2.3016 -4.8915 9 7 5.2995 -0.6587 -3.9246 10 6 6.3718 -0.7597 -4.9177 11 1 6.4377 -1.7492 -5.3700 12 6 6.3728 0.3872 -5.9420 13 6 7.2808 1.1534 -4.9614 14 1 8.0813 1.7099 -5.4491 15 8 6.5608 1.9379 -4.0084 16 6 7.7230 -0.2173 -4.4228 17 6 2.0192 -2.1291 -2.9406 18 6 1.6156 -3.2346 -3.8868 19 6 0.4954 -4.0476 -3.2256 20 6 -0.5699 -3.0862 -2.6894 21 6 -0.0051 -2.3108 -1.4958 22 7 1.2885 -1.7252 -1.8771 23 1 -0.3933 0.4418 -0.7650 24 1 1.7923 -0.5139 0.8900 25 1 1.5616 2.4678 1.2085 26 1 3.5346 1.7702 -0.0322 27 1 3.8158 0.3031 -1.6009 28 1 5.3580 -0.0023 -3.2127 29 1 6.8622 0.1326 -6.8820 30 1 5.3947 0.8470 -6.0837 31 1 6.2800 2.8012 -4.3414 32 1 7.8342 -0.2454 -3.3388 33 1 8.5808 -0.6370 -4.9483 34 1 1.2554 -2.8050 -4.8215 35 1 2.4715 -3.8799 -4.0845 36 1 0.0467 -4.7154 -3.9610 37 1 0.9066 -4.6338 -2.4037 38 1 -1.4448 -3.6539 -2.3725 39 1 -0.8561 -2.3864 -3.4745 40 1 0.1347 -2.9884 -0.6535 41 1 -0.6970 -1.5163 -1.2164 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_16915396.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:03 Heat of formation + Delta-G solvation = -45.125666 kcal Electronic energy + Delta-G solvation = -24496.095066 eV Core-core repulsion = 20957.837737 eV Total energy + Delta-G solvation = -3538.257329 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.146 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.71314 -40.96483 -39.12103 -38.01686 -36.87525 -35.95062 -33.65044 -33.25788 -31.13658 -29.43646 -26.74526 -26.66596 -25.49544 -24.64622 -23.51876 -21.73941 -21.12716 -20.41976 -19.51675 -18.94988 -18.15992 -17.32576 -16.88249 -16.63379 -16.58584 -16.08433 -15.88030 -15.51035 -15.43604 -15.27275 -15.09857 -15.03017 -14.55045 -14.37274 -14.25115 -13.88333 -13.55462 -13.42432 -13.21823 -12.75338 -12.60271 -12.32390 -12.25465 -12.05646 -11.99623 -11.82200 -11.77066 -11.42184 -10.72163 -10.70663 -10.55486 -9.80288 -9.46109 -8.93661 -5.04164 0.92550 1.05506 1.41036 1.62110 1.81522 2.01367 2.51240 2.77555 3.06604 3.17720 3.47332 3.52707 3.56187 3.68768 3.77484 3.80695 3.82347 3.91357 4.13493 4.25076 4.30130 4.38122 4.42290 4.44096 4.62148 4.67529 4.71838 4.72756 4.76774 4.85039 4.87123 4.90943 4.98219 5.03116 5.06353 5.12306 5.19697 5.27835 5.80251 5.85846 6.11292 6.28341 6.35474 6.61620 6.92154 7.63084 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.044 4.044 3 Si 0.716 3.284 4 C -0.012 4.012 5 C -0.166 4.166 6 C -0.233 4.233 7 C 0.595 3.405 8 O -0.552 6.552 9 N -0.704 5.704 10 C 0.129 3.871 11 H 0.102 0.898 12 C -0.185 4.185 13 C 0.077 3.923 14 H 0.070 0.930 15 O -0.553 6.553 16 C -0.144 4.144 17 C 0.120 3.880 18 C -0.055 4.055 19 C -0.130 4.130 20 C -0.138 4.138 21 C 0.099 3.901 22 N -0.426 5.426 23 H 0.379 0.621 24 H 0.116 0.884 25 H -0.253 1.253 26 H -0.251 1.251 27 H 0.148 0.852 28 H 0.406 0.594 29 H 0.097 0.903 30 H 0.077 0.923 31 H 0.384 0.616 32 H 0.082 0.918 33 H 0.108 0.892 34 H 0.088 0.912 35 H 0.099 0.901 36 H 0.079 0.921 37 H 0.067 0.933 38 H 0.088 0.912 39 H 0.075 0.925 40 H 0.081 0.919 41 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.542 3.109 -0.861 3.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.154 4.154 3 Si 0.616 3.384 4 C -0.121 4.121 5 C -0.190 4.190 6 C -0.243 4.243 7 C 0.384 3.616 8 O -0.432 6.432 9 N -0.355 5.355 10 C 0.023 3.977 11 H 0.120 0.880 12 C -0.224 4.224 13 C 0.018 3.982 14 H 0.088 0.912 15 O -0.359 6.359 16 C -0.182 4.182 17 C 0.002 3.998 18 C -0.093 4.093 19 C -0.167 4.167 20 C -0.176 4.176 21 C -0.021 4.021 22 N -0.102 5.102 23 H 0.227 0.773 24 H 0.133 0.867 25 H -0.178 1.178 26 H -0.175 1.175 27 H 0.165 0.835 28 H 0.243 0.757 29 H 0.116 0.884 30 H 0.096 0.904 31 H 0.232 0.768 32 H 0.100 0.900 33 H 0.127 0.873 34 H 0.107 0.893 35 H 0.118 0.882 36 H 0.098 0.902 37 H 0.086 0.914 38 H 0.106 0.894 39 H 0.094 0.906 40 H 0.099 0.901 41 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -1.248 2.169 0.015 2.502 hybrid contribution 0.095 0.190 0.188 0.284 sum -1.152 2.359 0.203 2.634 Atomic orbital electron populations 1.86484 1.17601 1.81147 1.49665 1.24873 0.84581 1.10465 0.95528 0.94097 0.81220 0.76418 0.86660 1.20629 0.96224 0.95704 0.99530 1.21772 0.97879 1.02652 0.96722 1.19813 0.97970 1.04899 1.01598 1.17334 0.80853 0.79883 0.83498 1.90751 1.79116 1.37201 1.36117 1.45430 1.20266 1.38632 1.31212 1.21673 0.86709 0.99597 0.89762 0.88023 1.24181 1.01486 0.98408 0.98372 1.22834 0.93547 0.91854 0.89950 0.91190 1.86371 1.76075 1.32913 1.40533 1.23453 0.97451 0.94290 1.02959 1.20374 0.91221 0.97660 0.90524 1.20508 0.99398 0.93551 0.95801 1.21735 0.95899 0.97934 1.01162 1.21944 0.99171 0.98996 0.97492 1.22300 0.82678 0.98988 0.98177 1.43850 1.17507 1.27056 1.21777 0.77293 0.86670 1.17779 1.17524 0.83489 0.75730 0.88440 0.90392 0.76789 0.89952 0.87346 0.89350 0.88245 0.90226 0.91387 0.89370 0.90596 0.90121 0.87541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.65 10.28 -35.23 -0.36 0.29 16 2 C -0.04 0.03 3.00 36.00 0.11 0.13 16 3 Si 0.72 -1.09 31.29 -169.99 -5.32 -6.41 16 4 C -0.01 -0.01 6.15 -81.87 -0.50 -0.52 16 5 C -0.17 -0.30 9.09 -37.47 -0.34 -0.64 16 6 C -0.23 -0.87 6.28 -103.48 -0.65 -1.52 16 7 C 0.59 2.91 7.81 -12.59 -0.10 2.81 16 8 O -0.55 -4.18 14.95 5.26 0.08 -4.10 16 9 N -0.70 -1.82 5.13 -54.15 -0.28 -2.10 16 10 C 0.13 0.20 4.29 -67.12 -0.29 -0.09 16 11 H 0.10 0.29 7.50 -51.93 -0.39 -0.10 16 12 C -0.19 0.01 7.73 -25.78 -0.20 -0.19 16 13 C 0.08 -0.07 5.28 -25.78 -0.14 -0.21 16 14 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 15 O -0.55 0.37 12.34 -35.23 -0.43 -0.06 16 16 C -0.14 0.06 7.65 -25.92 -0.20 -0.14 16 17 C 0.12 0.35 6.57 -81.64 -0.54 -0.19 16 18 C -0.05 -0.10 5.32 -27.53 -0.15 -0.24 16 19 C -0.13 0.08 5.98 -26.43 -0.16 -0.08 16 20 C -0.14 0.25 5.92 -26.56 -0.16 0.09 16 21 C 0.10 -0.10 6.22 -3.69 -0.02 -0.12 16 22 N -0.43 -0.52 3.11 -107.37 -0.33 -0.85 16 23 H 0.38 -1.72 8.27 45.56 0.38 -1.34 16 24 H 0.12 -0.01 7.96 -51.93 -0.41 -0.42 16 25 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 26 H -0.25 -0.15 6.77 56.52 0.38 0.23 16 27 H 0.15 0.07 6.30 -52.49 -0.33 -0.26 16 28 H 0.41 0.67 6.76 -40.82 -0.28 0.39 16 29 H 0.10 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 31 H 0.38 -1.64 9.12 45.56 0.42 -1.22 16 32 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.11 -0.22 8.14 -51.93 -0.42 -0.65 16 34 H 0.09 0.15 8.14 -51.93 -0.42 -0.27 16 35 H 0.10 0.32 7.40 -51.93 -0.38 -0.07 16 36 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.07 -0.01 8.12 -51.93 -0.42 -0.43 16 38 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 39 H 0.08 -0.13 8.11 -51.93 -0.42 -0.55 16 40 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 41 H 0.11 -0.24 5.68 -51.93 -0.29 -0.53 16 LS Contribution 326.77 15.07 4.92 4.92 Total: 0.00 -7.71 326.77 -10.21 -17.92 By element: Atomic # 1 Polarization: -3.56 SS G_CDS: -5.16 Total: -8.72 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -3.33 Total: -0.90 kcal Atomic # 7 Polarization: -2.34 SS G_CDS: -0.61 Total: -2.95 kcal Atomic # 8 Polarization: -3.15 SS G_CDS: -0.72 Total: -3.87 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.32 Total: -6.41 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -7.71 -10.21 -17.92 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_16915396.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.203 kcal (2) G-P(sol) polarization free energy of solvation -7.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.913 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.922 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.126 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds