Wall clock time and date at job start Sun Mar 7 2021 22:02:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86306 * 109.46787 * 2 1 4 4 C 1.50697 * 109.47263 * 240.00049 * 2 1 3 5 5 C 1.38705 * 120.02627 * 284.99845 * 4 2 1 6 6 O 1.35903 * 120.06001 * 359.97438 * 5 4 2 7 7 C 1.42902 * 117.00190 * 180.02562 * 6 5 4 8 8 C 1.50697 * 109.46708 * 179.97438 * 7 6 5 9 9 O 1.21277 * 120.00558 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99381 * 179.97438 * 8 7 6 11 11 C 1.46506 * 119.99785 * 179.97438 * 10 8 7 12 12 H 1.09002 * 112.90735 * 23.74853 * 11 10 8 13 13 C 1.53776 * 113.61677 * 155.00068 * 11 10 8 14 14 C 1.53774 * 87.08408 * 89.11606 * 13 11 10 15 15 H 1.08995 * 113.62199 * 140.06511 * 14 13 11 16 16 O 1.42903 * 113.61673 * 270.88945 * 14 13 11 17 17 C 1.53777 * 87.08184 * 25.43089 * 14 13 11 18 18 C 1.38758 * 119.88669 * 180.25693 * 5 4 2 19 19 C 1.38125 * 119.94492 * 359.41833 * 18 5 4 20 20 C 1.38289 * 120.05165 * 0.60369 * 19 18 5 21 21 C 1.38167 * 120.02615 * 104.97560 * 4 2 1 22 22 H 0.96698 * 114.00156 * 60.00542 * 1 2 3 23 23 H 1.09000 * 109.47248 * 119.99656 * 2 1 3 24 24 H 1.48496 * 109.99875 * 60.00258 * 3 2 1 25 25 H 1.48502 * 109.99463 * 181.31732 * 3 2 1 26 26 H 1.08996 * 109.47019 * 59.99923 * 7 6 5 27 27 H 1.09000 * 109.46537 * 299.99676 * 7 6 5 28 28 H 0.96997 * 120.00900 * 0.02562 * 10 8 7 29 29 H 1.09002 * 113.61135 * 334.56699 * 13 11 10 30 30 H 1.08996 * 113.61949 * 203.66777 * 13 11 10 31 31 H 0.96700 * 114.00311 * 179.97438 * 16 14 13 32 32 H 1.09007 * 113.61025 * 89.11391 * 17 14 13 33 33 H 1.08997 * 113.62410 * 220.02130 * 17 14 13 34 34 H 1.07999 * 120.02956 * 179.70656 * 18 5 4 35 35 H 1.08001 * 119.97297 * 180.30040 * 19 18 5 36 36 H 1.07997 * 119.94283 * 179.69230 * 20 19 18 37 37 H 1.07996 * 119.97650 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.8697 -2.0939 -1.3069 6 8 1.3568 -2.8107 -0.2724 7 6 1.3252 -4.2317 -0.4203 8 6 0.7289 -4.8523 0.8168 9 8 0.3671 -4.1472 1.7349 10 7 0.5977 -6.1909 0.9028 11 6 0.0185 -6.7943 2.1057 12 1 -0.6241 -6.1081 2.6573 13 6 -0.6197 -8.1713 1.8580 14 6 0.7620 -8.7776 2.1545 15 1 0.7197 -9.6933 2.7441 16 8 1.5935 -8.8999 0.9987 17 6 1.0486 -7.5181 2.9888 18 6 2.3380 -2.7454 -2.4390 19 6 2.8531 -2.0144 -3.4916 20 6 2.9138 -0.6351 -3.4127 21 6 2.4533 0.0160 -2.2835 22 1 -0.3933 0.4416 -0.7651 23 1 1.7923 -0.5138 0.8900 24 1 1.5614 2.4679 1.2085 25 1 3.5345 1.7703 -0.0321 26 1 2.3396 -4.6050 -0.5608 27 1 0.7184 -4.4933 -1.2871 28 1 0.8874 -6.7549 0.1688 29 1 -0.9506 -8.3206 0.8302 30 1 -1.3803 -8.4384 2.5915 31 1 2.4641 -9.2804 1.1789 32 1 0.7441 -7.6066 4.0317 33 1 2.0644 -7.1400 2.8741 34 1 2.2955 -3.8229 -2.4990 35 1 3.2133 -2.5207 -4.3750 36 1 3.3215 -0.0655 -4.2348 37 1 2.5007 1.0933 -2.2248 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_2989392.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:06 Heat of formation + Delta-G solvation = -91.780211 kcal Electronic energy + Delta-G solvation = -21805.013914 eV Core-core repulsion = 18322.552449 eV Total energy + Delta-G solvation = -3482.461465 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.75463 -41.13061 -39.75189 -38.45247 -37.49291 -36.08153 -34.09983 -32.72509 -31.25716 -29.48307 -26.81200 -26.69130 -25.43514 -23.53088 -22.63305 -21.83029 -20.67566 -19.51703 -18.73682 -18.12857 -17.84060 -17.52580 -17.18224 -16.86170 -16.54606 -16.18259 -16.00242 -15.54417 -15.41108 -15.14361 -15.00794 -14.79188 -14.22632 -13.82914 -13.78826 -13.60237 -13.41959 -13.03051 -12.73065 -12.37772 -12.37032 -12.20673 -12.10137 -11.78282 -11.50577 -11.10961 -10.72751 -10.39112 -10.20168 -9.96863 -9.23291 -5.06027 0.23562 0.40772 1.27830 1.32639 1.42404 1.61905 1.94866 2.53304 2.70564 3.08421 3.44002 3.44543 3.54182 3.70239 3.75214 3.80356 3.85565 3.95052 3.98527 4.10362 4.12625 4.30451 4.35878 4.51976 4.62778 4.66537 4.68186 4.77727 4.82232 4.92931 4.97342 4.98668 5.28103 5.37789 5.45780 5.52623 5.76230 6.24545 6.41157 6.80592 6.82439 7.04552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.076 4.076 3 Si 0.799 3.201 4 C -0.171 4.171 5 C 0.123 3.877 6 O -0.315 6.315 7 C 0.040 3.960 8 C 0.511 3.489 9 O -0.573 6.573 10 N -0.687 5.687 11 C 0.107 3.893 12 H 0.080 0.920 13 C -0.133 4.133 14 C 0.086 3.914 15 H 0.091 0.909 16 O -0.566 6.566 17 C -0.183 4.183 18 C -0.215 4.215 19 C -0.076 4.076 20 C -0.152 4.152 21 C -0.078 4.078 22 H 0.391 0.609 23 H 0.077 0.923 24 H -0.303 1.303 25 H -0.281 1.281 26 H 0.119 0.881 27 H 0.121 0.879 28 H 0.420 0.580 29 H 0.082 0.918 30 H 0.126 0.874 31 H 0.400 0.600 32 H 0.108 0.892 33 H 0.066 0.934 34 H 0.150 0.850 35 H 0.154 0.846 36 H 0.157 0.843 37 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.356 -4.640 -6.706 8.488 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.184 4.184 3 Si 0.704 3.296 4 C -0.172 4.172 5 C 0.077 3.923 6 O -0.228 6.228 7 C -0.038 4.038 8 C 0.298 3.702 9 O -0.452 6.452 10 N -0.341 5.341 11 C 0.002 3.998 12 H 0.098 0.902 13 C -0.171 4.171 14 C 0.027 3.973 15 H 0.108 0.892 16 O -0.375 6.375 17 C -0.222 4.222 18 C -0.233 4.233 19 C -0.094 4.094 20 C -0.170 4.170 21 C -0.095 4.095 22 H 0.240 0.760 23 H 0.095 0.905 24 H -0.232 1.232 25 H -0.207 1.207 26 H 0.137 0.863 27 H 0.138 0.862 28 H 0.259 0.741 29 H 0.101 0.899 30 H 0.144 0.856 31 H 0.251 0.749 32 H 0.126 0.874 33 H 0.085 0.915 34 H 0.168 0.832 35 H 0.172 0.828 36 H 0.174 0.826 37 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 2.067 -3.570 -5.199 6.636 hybrid contribution 0.637 -1.322 0.583 1.579 sum 2.703 -4.892 -4.616 7.249 Atomic orbital electron populations 1.86542 1.17760 1.82227 1.49979 1.25243 0.85126 1.11460 0.96593 0.94011 0.77535 0.73546 0.84551 1.19865 1.06984 0.91414 0.98956 1.19151 0.94413 0.91306 0.87405 1.86186 1.78152 1.18510 1.39937 1.22631 1.04196 0.80023 0.96905 1.20588 0.78331 0.82960 0.88346 1.90758 1.50375 1.62563 1.41480 1.45398 1.62909 1.05243 1.20545 1.21940 0.96242 0.94846 0.86787 0.90226 1.23476 0.96624 0.92494 1.04529 1.22739 0.91256 0.96544 0.86741 0.89166 1.86304 1.31528 1.86521 1.33141 1.24157 0.99827 0.97922 1.00293 1.21581 1.05828 1.01695 0.94228 1.21416 0.95485 0.94417 0.98037 1.21469 1.01753 0.94930 0.98857 1.21124 0.96117 1.00204 0.92064 0.76006 0.90517 1.23161 1.20735 0.86290 0.86186 0.74136 0.89902 0.85600 0.74918 0.87388 0.91537 0.83222 0.82817 0.82576 0.82400 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -5.42 12.88 -148.98 -1.92 -7.34 16 2 C -0.08 -0.62 2.38 71.23 0.17 -0.45 16 3 Si 0.80 1.70 29.92 68.60 2.05 3.75 16 4 C -0.17 -0.97 5.27 -19.77 -0.10 -1.07 16 5 C 0.12 0.84 6.66 22.51 0.15 0.99 16 6 O -0.31 -3.54 9.00 -73.43 -0.66 -4.20 16 7 C 0.04 0.10 5.22 71.24 0.37 0.47 16 8 C 0.51 4.37 7.91 87.66 0.69 5.07 16 9 O -0.57 -11.57 16.10 16.02 0.26 -11.31 16 10 N -0.69 -1.30 5.15 -440.03 -2.27 -3.56 16 11 C 0.11 0.22 4.32 45.51 0.20 0.42 16 12 H 0.08 0.57 7.47 -2.39 -0.02 0.56 16 13 C -0.13 0.47 7.66 31.12 0.24 0.71 16 14 C 0.09 -0.42 5.28 31.12 0.16 -0.26 16 15 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 16 O -0.57 2.89 12.31 -148.98 -1.83 1.06 16 17 C -0.18 0.25 7.71 31.12 0.24 0.49 16 18 C -0.21 -0.08 9.04 22.37 0.20 0.12 16 19 C -0.08 0.20 10.04 22.26 0.22 0.42 16 20 C -0.15 0.45 10.04 22.28 0.22 0.67 16 21 C -0.08 0.05 8.66 22.26 0.19 0.24 16 22 H 0.39 -0.18 8.70 -74.06 -0.64 -0.83 16 23 H 0.08 1.10 7.83 -2.39 -0.02 1.08 16 24 H -0.30 -3.04 7.11 99.48 0.71 -2.33 16 25 H -0.28 -1.63 7.11 99.48 0.71 -0.92 16 26 H 0.12 -0.42 7.65 -2.39 -0.02 -0.44 16 27 H 0.12 -0.41 7.67 -2.39 -0.02 -0.43 16 28 H 0.42 -1.28 7.59 -92.71 -0.70 -1.99 16 29 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 30 H 0.13 -0.83 8.14 -2.39 -0.02 -0.85 16 31 H 0.40 -4.76 9.12 -74.06 -0.68 -5.44 16 32 H 0.11 -0.33 8.14 -2.38 -0.02 -0.35 16 33 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 34 H 0.15 -0.75 6.30 -2.91 -0.02 -0.77 16 35 H 0.15 -1.23 8.06 -2.91 -0.02 -1.26 16 36 H 0.16 -1.31 8.06 -2.91 -0.02 -1.33 16 37 H 0.16 -1.01 5.13 -2.91 -0.01 -1.03 16 Total: 0.00 -28.79 314.04 -2.27 -31.06 By element: Atomic # 1 Polarization: -16.42 SS G_CDS: -0.86 Total: -17.28 kcal Atomic # 6 Polarization: 4.87 SS G_CDS: 2.96 Total: 7.83 kcal Atomic # 7 Polarization: -1.30 SS G_CDS: -2.27 Total: -3.56 kcal Atomic # 8 Polarization: -17.64 SS G_CDS: -4.16 Total: -21.80 kcal Atomic # 14 Polarization: 1.70 SS G_CDS: 2.05 Total: 3.75 kcal Total: -28.79 -2.27 -31.06 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_2989392.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.724 kcal (2) G-P(sol) polarization free energy of solvation -28.787 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.056 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.780 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds