Wall clock time and date at job start Sun Mar 7 2021 22:02:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46751 * 2 1 4 4 C 1.50701 * 109.47089 * 240.00362 * 2 1 3 5 5 C 1.38265 * 119.94603 * 299.99970 * 4 2 1 6 6 C 1.38139 * 120.05729 * 180.02562 * 5 4 2 7 7 C 1.38743 * 119.94274 * 359.97438 * 6 5 4 8 8 O 1.35901 * 120.05417 * 180.02562 * 7 6 5 9 9 C 1.42895 * 116.99884 * 179.97438 * 8 7 6 10 10 C 1.50703 * 109.47034 * 180.02562 * 9 8 7 11 11 O 1.21278 * 120.00183 * 0.02562 * 10 9 8 12 12 N 1.34783 * 119.99755 * 179.97438 * 10 9 8 13 13 C 1.46499 * 119.99531 * 180.02562 * 12 10 9 14 14 H 1.08997 * 112.91343 * 23.75029 * 13 12 10 15 15 C 1.53781 * 113.61225 * 155.00207 * 13 12 10 16 16 C 1.53786 * 87.17350 * 139.93836 * 15 13 12 17 17 H 1.08993 * 113.61491 * 89.15923 * 16 15 13 18 18 O 1.42902 * 113.61284 * 220.06071 * 16 15 13 19 19 C 1.53782 * 113.61191 * 252.49880 * 13 12 10 20 20 C 1.38726 * 119.88792 * 0.27489 * 7 6 5 21 21 C 1.38149 * 119.94473 * 359.42931 * 20 7 6 22 22 H 0.96696 * 114.00306 * 60.00281 * 1 2 3 23 23 H 1.08994 * 109.47380 * 120.00182 * 2 1 3 24 24 H 1.48506 * 109.99809 * 60.00584 * 3 2 1 25 25 H 1.48500 * 110.00065 * 181.31631 * 3 2 1 26 26 H 1.07998 * 119.97181 * 0.02562 * 5 4 2 27 27 H 1.08002 * 120.03129 * 179.97438 * 6 5 4 28 28 H 1.08994 * 109.47399 * 59.99827 * 9 8 7 29 29 H 1.09007 * 109.47181 * 299.99805 * 9 8 7 30 30 H 0.96997 * 119.99692 * 0.02562 * 12 10 9 31 31 H 1.09002 * 113.61445 * 254.52836 * 15 13 12 32 32 H 1.09002 * 113.61408 * 25.34566 * 15 13 12 33 33 H 0.96700 * 113.99699 * 179.97438 * 18 16 15 34 34 H 1.08997 * 113.61668 * 334.56642 * 19 13 12 35 35 H 1.08998 * 113.61674 * 105.39151 * 19 13 12 36 36 H 1.08003 * 120.02701 * 179.72713 * 20 7 6 37 37 H 1.07995 * 119.97308 * 180.32070 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5966 -2.0341 -1.4483 6 6 2.0563 -2.6876 -2.5752 7 6 2.8540 -2.0143 -3.4892 8 8 3.3070 -2.6549 -4.5988 9 6 4.1229 -1.8995 -5.4963 10 6 4.5274 -2.7681 -6.6595 11 8 4.1533 -3.9204 -6.7148 12 7 5.3041 -2.2639 -7.6389 13 6 5.6968 -3.1082 -8.7700 14 1 5.0110 -3.9386 -8.9379 15 6 6.0275 -2.3149 -10.0452 16 6 7.1899 -3.2978 -10.2637 17 1 6.9130 -4.1800 -10.8408 18 8 8.3847 -2.6746 -10.7392 19 6 7.1761 -3.5272 -8.7414 20 6 3.1926 -0.6877 -3.2657 21 6 2.7254 -0.0369 -2.1403 22 1 -0.3933 0.4416 -0.7650 23 1 1.7924 -0.5138 0.8899 24 1 1.5614 2.4678 1.2086 25 1 3.5345 1.7704 -0.0321 26 1 0.9753 -2.5576 -0.7368 27 1 1.7949 -3.7217 -2.7447 28 1 5.0145 -1.5537 -4.9732 29 1 3.5608 -1.0405 -5.8629 30 1 5.6029 -1.3422 -7.5949 31 1 5.2539 -2.3763 -10.8106 32 1 6.3510 -1.2921 -9.8515 33 1 9.1195 -3.2877 -10.8782 34 1 7.8151 -2.8364 -8.1913 35 1 7.3299 -4.5670 -8.4529 36 1 3.8171 -0.1628 -3.9735 37 1 2.9845 0.9974 -1.9686 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_2989410.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:10 Heat of formation + Delta-G solvation = -91.007708 kcal Electronic energy + Delta-G solvation = -20895.075625 eV Core-core repulsion = 17412.647657 eV Total energy + Delta-G solvation = -3482.427967 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -41.65317 -41.02168 -39.79272 -38.86093 -37.13913 -36.43566 -34.15694 -32.40669 -31.75632 -29.75286 -26.93168 -26.32357 -25.22322 -23.90145 -22.40734 -21.75407 -21.03744 -19.57215 -18.90186 -18.36684 -18.11025 -17.50783 -17.09401 -16.85678 -16.49407 -16.18741 -15.97082 -15.65131 -15.57591 -15.10008 -14.73762 -14.66252 -14.27338 -13.85279 -13.76780 -13.66307 -13.57200 -13.47097 -12.82745 -12.43481 -12.23387 -12.14138 -12.06634 -11.86907 -11.74269 -11.06498 -10.85868 -10.43636 -10.22131 -10.06945 -9.23476 -5.07172 0.26732 0.27769 1.28116 1.37809 1.40458 1.59487 1.95043 2.47701 2.64162 3.12022 3.25770 3.40917 3.46332 3.51007 3.64672 3.65911 3.70743 3.78710 3.84368 3.84974 3.86349 4.24303 4.34073 4.42269 4.49251 4.55088 4.58326 4.62315 4.76659 4.80993 4.92860 4.95602 5.12633 5.22578 5.32720 5.48436 5.65869 6.18023 6.32121 6.55530 6.57571 7.01762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.063 4.063 3 Si 0.687 3.313 4 C -0.157 4.157 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.517 3.483 11 O -0.512 6.512 12 N -0.715 5.715 13 C 0.126 3.874 14 H 0.121 0.879 15 C -0.136 4.136 16 C 0.079 3.921 17 H 0.089 0.911 18 O -0.558 6.558 19 C -0.183 4.183 20 C -0.206 4.206 21 C -0.076 4.076 22 H 0.379 0.621 23 H 0.113 0.887 24 H -0.255 1.255 25 H -0.259 1.259 26 H 0.135 0.865 27 H 0.136 0.864 28 H 0.095 0.905 29 H 0.097 0.903 30 H 0.404 0.596 31 H 0.084 0.916 32 H 0.097 0.903 33 H 0.382 0.618 34 H 0.094 0.906 35 H 0.077 0.923 36 H 0.132 0.868 37 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.961 3.905 -3.453 5.569 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.174 4.174 3 Si 0.589 3.411 4 C -0.158 4.158 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.088 3.912 8 O -0.201 6.201 9 C -0.039 4.039 10 C 0.302 3.698 11 O -0.385 6.385 12 N -0.369 5.369 13 C 0.021 3.979 14 H 0.139 0.861 15 C -0.174 4.174 16 C 0.020 3.980 17 H 0.106 0.894 18 O -0.364 6.364 19 C -0.223 4.223 20 C -0.225 4.225 21 C -0.094 4.094 22 H 0.226 0.774 23 H 0.130 0.870 24 H -0.180 1.180 25 H -0.184 1.184 26 H 0.153 0.847 27 H 0.154 0.846 28 H 0.113 0.887 29 H 0.115 0.885 30 H 0.239 0.761 31 H 0.103 0.897 32 H 0.115 0.885 33 H 0.230 0.770 34 H 0.112 0.888 35 H 0.096 0.904 36 H 0.150 0.850 37 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 1.836 3.669 -2.525 4.818 hybrid contribution 0.798 -0.450 0.111 0.923 sum 2.635 3.219 -2.414 4.809 Atomic orbital electron populations 1.86501 1.17173 1.81694 1.49264 1.24978 0.85189 1.09876 0.97404 0.94809 0.80816 0.78185 0.87252 1.20259 1.01847 0.95603 0.98057 1.20857 0.96787 0.93420 0.95841 1.20543 1.00409 1.01268 0.94166 1.19077 0.94294 0.91096 0.86709 1.86173 1.64296 1.38616 1.30978 1.22477 0.96464 0.94551 0.90420 1.20085 0.78461 0.88101 0.83153 1.90784 1.53224 1.17598 1.76934 1.45736 1.52603 1.15899 1.22659 1.22256 0.95856 0.94822 0.84969 0.86072 1.23467 0.97074 0.99984 0.96914 1.23096 0.86021 0.95979 0.92928 0.89354 1.86511 1.22664 1.38869 1.88306 1.24250 0.97032 1.03119 0.97856 1.21173 1.06150 0.94253 1.00922 1.20791 0.96250 0.99048 0.93276 0.77377 0.86971 1.18002 1.18391 0.84731 0.84628 0.88695 0.88550 0.76082 0.89700 0.88484 0.76977 0.88765 0.90442 0.85047 0.85310 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.12 12.77 -35.23 -0.45 -0.57 16 2 C -0.06 0.02 2.82 36.01 0.10 0.12 16 3 Si 0.69 -0.87 29.78 -169.99 -5.06 -5.93 16 4 C -0.16 -0.03 5.39 -104.60 -0.56 -0.59 16 5 C -0.05 -0.04 9.60 -39.61 -0.38 -0.43 16 6 C -0.15 -0.24 9.99 -39.43 -0.39 -0.63 16 7 C 0.13 0.21 6.69 -39.21 -0.26 -0.06 16 8 O -0.29 -0.75 9.67 -39.34 -0.38 -1.13 16 9 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 10 C 0.52 0.55 7.91 -10.98 -0.09 0.47 16 11 O -0.51 -3.09 16.10 -14.35 -0.23 -3.32 16 12 N -0.72 1.35 5.35 -53.02 -0.28 1.07 16 13 C 0.13 -0.16 4.24 -67.12 -0.28 -0.44 16 14 H 0.12 0.02 7.47 -51.93 -0.39 -0.37 16 15 C -0.14 0.29 7.66 -25.92 -0.20 0.10 16 16 C 0.08 -0.14 5.22 -25.82 -0.13 -0.28 16 17 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 18 O -0.56 0.34 13.67 -35.23 -0.48 -0.14 16 19 C -0.18 0.28 7.72 -25.82 -0.20 0.08 16 20 C -0.21 0.11 9.04 -39.43 -0.36 -0.25 16 21 C -0.08 0.05 8.66 -39.60 -0.34 -0.29 16 22 H 0.38 -1.37 8.70 45.56 0.40 -0.97 16 23 H 0.11 0.02 7.96 -51.93 -0.41 -0.39 16 24 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 25 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 26 H 0.13 0.02 8.06 -52.49 -0.42 -0.41 16 27 H 0.14 0.17 8.06 -52.49 -0.42 -0.26 16 28 H 0.10 -0.35 7.65 -51.93 -0.40 -0.75 16 29 H 0.10 -0.38 7.67 -51.93 -0.40 -0.78 16 30 H 0.40 -1.99 8.73 -40.82 -0.36 -2.34 16 31 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 32 H 0.10 -0.23 8.12 -51.93 -0.42 -0.65 16 33 H 0.38 -1.67 9.12 45.56 0.42 -1.26 16 34 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 35 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.13 -0.43 6.30 -52.48 -0.33 -0.77 16 37 H 0.13 -0.35 4.87 -52.49 -0.26 -0.61 16 LS Contribution 316.99 15.07 4.78 4.78 Total: 0.00 -10.29 316.99 -8.91 -19.20 By element: Atomic # 1 Polarization: -8.01 SS G_CDS: -3.88 Total: -11.89 kcal Atomic # 6 Polarization: 0.85 SS G_CDS: -2.91 Total: -2.06 kcal Atomic # 7 Polarization: 1.35 SS G_CDS: -0.28 Total: 1.07 kcal Atomic # 8 Polarization: -3.62 SS G_CDS: -1.54 Total: -5.16 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.06 Total: -5.93 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -10.29 -8.91 -19.20 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_2989410.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.805 kcal (2) G-P(sol) polarization free energy of solvation -10.293 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.097 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.203 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.008 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds