Wall clock time and date at job start Sun Mar 7 2021 22:02:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46751 * 2 1 4 4 C 1.50701 * 109.47089 * 240.00362 * 2 1 3 5 5 C 1.38265 * 119.94603 * 299.99970 * 4 2 1 6 6 C 1.38139 * 120.05729 * 180.02562 * 5 4 2 7 7 C 1.38743 * 119.94274 * 359.97438 * 6 5 4 8 8 O 1.35901 * 120.05417 * 180.02562 * 7 6 5 9 9 C 1.42895 * 116.99884 * 179.97438 * 8 7 6 10 10 C 1.50703 * 109.47034 * 180.02562 * 9 8 7 11 11 O 1.21278 * 120.00183 * 0.02562 * 10 9 8 12 12 N 1.34783 * 119.99755 * 179.97438 * 10 9 8 13 13 C 1.46499 * 119.99531 * 180.02562 * 12 10 9 14 14 H 1.08997 * 112.91343 * 23.75029 * 13 12 10 15 15 C 1.53781 * 113.61225 * 155.00207 * 13 12 10 16 16 C 1.53786 * 87.17350 * 139.93836 * 15 13 12 17 17 H 1.08993 * 113.61491 * 89.15923 * 16 15 13 18 18 O 1.42902 * 113.61284 * 220.06071 * 16 15 13 19 19 C 1.53782 * 113.61191 * 252.49880 * 13 12 10 20 20 C 1.38726 * 119.88792 * 0.27489 * 7 6 5 21 21 C 1.38149 * 119.94473 * 359.42931 * 20 7 6 22 22 H 0.96696 * 114.00306 * 60.00281 * 1 2 3 23 23 H 1.08994 * 109.47380 * 120.00182 * 2 1 3 24 24 H 1.48506 * 109.99809 * 60.00584 * 3 2 1 25 25 H 1.48500 * 110.00065 * 181.31631 * 3 2 1 26 26 H 1.07998 * 119.97181 * 0.02562 * 5 4 2 27 27 H 1.08002 * 120.03129 * 179.97438 * 6 5 4 28 28 H 1.08994 * 109.47399 * 59.99827 * 9 8 7 29 29 H 1.09007 * 109.47181 * 299.99805 * 9 8 7 30 30 H 0.96997 * 119.99692 * 0.02562 * 12 10 9 31 31 H 1.09002 * 113.61445 * 254.52836 * 15 13 12 32 32 H 1.09002 * 113.61408 * 25.34566 * 15 13 12 33 33 H 0.96700 * 113.99699 * 179.97438 * 18 16 15 34 34 H 1.08997 * 113.61668 * 334.56642 * 19 13 12 35 35 H 1.08998 * 113.61674 * 105.39151 * 19 13 12 36 36 H 1.08003 * 120.02701 * 179.72713 * 20 7 6 37 37 H 1.07995 * 119.97308 * 180.32070 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5966 -2.0341 -1.4483 6 6 2.0563 -2.6876 -2.5752 7 6 2.8540 -2.0143 -3.4892 8 8 3.3070 -2.6549 -4.5988 9 6 4.1229 -1.8995 -5.4963 10 6 4.5274 -2.7681 -6.6595 11 8 4.1533 -3.9204 -6.7148 12 7 5.3041 -2.2639 -7.6389 13 6 5.6968 -3.1082 -8.7700 14 1 5.0110 -3.9386 -8.9379 15 6 6.0275 -2.3149 -10.0452 16 6 7.1899 -3.2978 -10.2637 17 1 6.9130 -4.1800 -10.8408 18 8 8.3847 -2.6746 -10.7392 19 6 7.1761 -3.5272 -8.7414 20 6 3.1926 -0.6877 -3.2657 21 6 2.7254 -0.0369 -2.1403 22 1 -0.3933 0.4416 -0.7650 23 1 1.7924 -0.5138 0.8899 24 1 1.5614 2.4678 1.2086 25 1 3.5345 1.7704 -0.0321 26 1 0.9753 -2.5576 -0.7368 27 1 1.7949 -3.7217 -2.7447 28 1 5.0145 -1.5537 -4.9732 29 1 3.5608 -1.0405 -5.8629 30 1 5.6029 -1.3422 -7.5949 31 1 5.2539 -2.3763 -10.8106 32 1 6.3510 -1.2921 -9.8515 33 1 9.1195 -3.2877 -10.8782 34 1 7.8151 -2.8364 -8.1913 35 1 7.3299 -4.5670 -8.4529 36 1 3.8171 -0.1628 -3.9735 37 1 2.9845 0.9974 -1.9686 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_2989410.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:10 Heat of formation + Delta-G solvation = -95.840236 kcal Electronic energy + Delta-G solvation = -20895.285179 eV Core-core repulsion = 17412.647657 eV Total energy + Delta-G solvation = -3482.637521 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -41.64860 -40.98209 -39.76274 -38.87894 -37.12291 -36.38063 -34.14402 -32.38290 -31.72737 -29.68374 -26.79326 -26.30249 -25.13181 -23.87059 -22.39577 -21.74957 -20.91901 -19.53808 -18.79464 -18.33766 -18.08973 -17.45428 -17.09281 -16.80744 -16.43798 -16.11941 -15.94558 -15.65986 -15.53854 -15.10367 -14.68255 -14.62055 -14.32805 -13.78125 -13.73453 -13.57785 -13.50561 -13.42195 -12.74723 -12.33541 -12.25132 -12.08203 -12.06059 -11.77632 -11.69722 -11.08447 -10.79703 -10.40638 -10.18837 -10.05350 -9.23505 -4.98517 0.26528 0.29843 1.34580 1.37895 1.45235 1.64854 1.99164 2.55856 2.65005 3.30408 3.38953 3.51551 3.56420 3.64422 3.73662 3.78712 3.82141 3.93356 3.95525 4.02400 4.08135 4.30003 4.41195 4.46565 4.50569 4.66200 4.69619 4.73521 4.92184 4.93446 4.96333 5.06220 5.14794 5.24461 5.42957 5.49063 5.68813 6.24263 6.42846 6.80037 6.84420 7.07136 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.074 4.074 3 Si 0.783 3.217 4 C -0.161 4.161 5 C -0.061 4.061 6 C -0.167 4.167 7 C 0.120 3.880 8 O -0.320 6.320 9 C 0.036 3.964 10 C 0.513 3.487 11 O -0.573 6.573 12 N -0.698 5.698 13 C 0.120 3.880 14 H 0.103 0.897 15 C -0.129 4.129 16 C 0.079 3.921 17 H 0.098 0.902 18 O -0.576 6.576 19 C -0.179 4.179 20 C -0.200 4.200 21 C -0.076 4.076 22 H 0.395 0.605 23 H 0.103 0.897 24 H -0.304 1.304 25 H -0.281 1.281 26 H 0.133 0.867 27 H 0.126 0.874 28 H 0.125 0.875 29 H 0.130 0.870 30 H 0.422 0.578 31 H 0.089 0.911 32 H 0.103 0.897 33 H 0.396 0.604 34 H 0.095 0.905 35 H 0.069 0.931 36 H 0.165 0.835 37 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.759 5.928 -4.142 7.741 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.183 4.183 3 Si 0.689 3.311 4 C -0.161 4.161 5 C -0.079 4.079 6 C -0.185 4.185 7 C 0.075 3.925 8 O -0.234 6.234 9 C -0.041 4.041 10 C 0.300 3.700 11 O -0.451 6.451 12 N -0.352 5.352 13 C 0.015 3.985 14 H 0.121 0.879 15 C -0.167 4.167 16 C 0.019 3.981 17 H 0.115 0.885 18 O -0.384 6.384 19 C -0.219 4.219 20 C -0.218 4.218 21 C -0.093 4.093 22 H 0.245 0.755 23 H 0.120 0.880 24 H -0.233 1.233 25 H -0.208 1.208 26 H 0.151 0.849 27 H 0.144 0.856 28 H 0.143 0.857 29 H 0.148 0.852 30 H 0.260 0.740 31 H 0.108 0.892 32 H 0.122 0.878 33 H 0.247 0.753 34 H 0.113 0.887 35 H 0.088 0.912 36 H 0.183 0.817 37 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 2.653 5.712 -3.257 7.090 hybrid contribution 0.569 -1.085 0.339 1.271 sum 3.222 4.627 -2.918 6.349 Atomic orbital electron populations 1.86462 1.17483 1.82225 1.50501 1.25191 0.85160 1.11064 0.96926 0.93739 0.77730 0.74878 0.84737 1.20366 1.02041 0.95295 0.98434 1.20898 0.97191 0.94068 0.95739 1.20625 1.01545 1.01267 0.95087 1.19212 0.94679 0.92040 0.86546 1.86127 1.65145 1.40355 1.31737 1.22753 0.97746 0.94289 0.89334 1.20618 0.77877 0.87586 0.83917 1.90759 1.55767 1.20238 1.78373 1.45629 1.51322 1.16597 1.21640 1.22202 0.95630 0.94885 0.85763 0.87941 1.23431 0.97001 1.00042 0.96220 1.23161 0.85921 0.96378 0.92616 0.88456 1.86466 1.23492 1.40088 1.88324 1.24205 0.96656 1.02646 0.98353 1.21509 1.05680 0.93288 1.01337 1.21073 0.95427 1.00060 0.92780 0.75510 0.88003 1.23252 1.20783 0.84936 0.85600 0.85744 0.85247 0.74002 0.89221 0.87834 0.75334 0.88664 0.91234 0.81732 0.82929 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.29 12.77 -148.98 -1.90 -2.19 16 2 C -0.07 0.04 2.82 71.24 0.20 0.24 16 3 Si 0.78 -2.67 29.78 68.60 2.04 -0.63 16 4 C -0.16 -0.02 5.39 -19.85 -0.11 -0.12 16 5 C -0.06 -0.18 9.60 22.25 0.21 0.04 16 6 C -0.17 -0.81 9.99 22.37 0.22 -0.59 16 7 C 0.12 0.38 6.69 22.51 0.15 0.53 16 8 O -0.32 -1.82 9.67 -73.40 -0.71 -2.53 16 9 C 0.04 -0.13 5.22 71.24 0.37 0.24 16 10 C 0.51 1.23 7.91 87.66 0.69 1.93 16 11 O -0.57 -8.08 16.10 16.01 0.26 -7.83 16 12 N -0.70 2.97 5.35 -440.03 -2.36 0.61 16 13 C 0.12 -0.26 4.24 45.52 0.19 -0.07 16 14 H 0.10 0.21 7.47 -2.39 -0.02 0.19 16 15 C -0.13 0.63 7.66 31.12 0.24 0.87 16 16 C 0.08 -0.30 5.22 31.18 0.16 -0.14 16 17 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 18 O -0.58 1.07 13.67 -148.98 -2.04 -0.97 16 19 C -0.18 0.51 7.72 31.18 0.24 0.75 16 20 C -0.20 0.58 9.04 22.37 0.20 0.79 16 21 C -0.08 0.24 8.66 22.26 0.19 0.43 16 22 H 0.39 -3.03 8.70 -74.06 -0.64 -3.67 16 23 H 0.10 0.11 7.96 -2.39 -0.02 0.09 16 24 H -0.30 -1.46 7.11 99.48 0.71 -0.75 16 25 H -0.28 -0.10 7.11 99.48 0.71 0.61 16 26 H 0.13 0.29 8.06 -2.91 -0.02 0.27 16 27 H 0.13 0.69 8.06 -2.91 -0.02 0.66 16 28 H 0.12 -1.23 7.65 -2.39 -0.02 -1.25 16 29 H 0.13 -1.38 7.67 -2.38 -0.02 -1.39 16 30 H 0.42 -4.86 8.73 -92.71 -0.81 -5.67 16 31 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 32 H 0.10 -0.62 8.12 -2.39 -0.02 -0.64 16 33 H 0.40 -3.65 9.12 -74.06 -0.68 -4.32 16 34 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 35 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 36 H 0.17 -1.70 6.30 -2.91 -0.02 -1.72 16 37 H 0.15 -1.27 4.87 -2.91 -0.01 -1.28 16 Total: 0.00 -26.35 316.99 -2.69 -29.05 By element: Atomic # 1 Polarization: -19.44 SS G_CDS: -0.96 Total: -20.40 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: 2.98 Total: 4.89 kcal Atomic # 7 Polarization: 2.97 SS G_CDS: -2.36 Total: 0.61 kcal Atomic # 8 Polarization: -9.12 SS G_CDS: -4.39 Total: -13.51 kcal Atomic # 14 Polarization: -2.67 SS G_CDS: 2.04 Total: -0.63 kcal Total: -26.35 -2.69 -29.05 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_2989410.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.794 kcal (2) G-P(sol) polarization free energy of solvation -26.354 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.148 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.692 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.046 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.840 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds