Wall clock time and date at job start Sun Mar 7 2021 22:02:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.46949 * 2 1 4 4 C 1.50696 * 109.47412 * 239.99523 * 2 1 3 5 5 C 1.38244 * 119.97351 * 120.00171 * 4 2 1 6 6 C 1.38281 * 120.11281 * 180.02562 * 5 4 2 7 7 C 1.38118 * 120.05778 * 0.02562 * 6 5 4 8 8 C 1.38751 * 119.94321 * 359.97438 * 7 6 5 9 9 O 1.35901 * 120.05450 * 180.02562 * 8 7 6 10 10 C 1.42895 * 117.00446 * 359.97438 * 9 8 7 11 11 C 1.53000 * 109.47569 * 179.97438 * 10 9 8 12 12 C 1.53003 * 109.47157 * 180.02562 * 11 10 9 13 13 C 1.50704 * 109.46753 * 180.02562 * 12 11 10 14 14 O 1.21277 * 119.99880 * 0.02562 * 13 12 11 15 15 N 1.34771 * 119.99639 * 179.97438 * 13 12 11 16 16 C 1.46499 * 120.00223 * 179.97438 * 15 13 12 17 17 H 1.09003 * 112.84397 * 23.80601 * 16 15 13 18 18 C 1.53777 * 113.61815 * 154.99964 * 16 15 13 19 19 C 1.53781 * 87.08184 * 89.11977 * 18 16 15 20 20 H 1.08993 * 113.61848 * 140.06592 * 19 18 16 21 21 O 1.42905 * 113.61237 * 270.88724 * 19 18 16 22 22 C 1.53779 * 113.61596 * 252.50103 * 16 15 13 23 23 C 1.38165 * 119.97010 * 300.25486 * 4 2 1 24 24 H 0.96693 * 114.00419 * 300.00057 * 1 2 3 25 25 H 1.09004 * 109.47072 * 119.99533 * 2 1 3 26 26 H 1.48507 * 109.99832 * 178.68093 * 3 2 1 27 27 H 1.48506 * 109.99555 * 299.99461 * 3 2 1 28 28 H 1.08003 * 119.94061 * 359.97438 * 5 4 2 29 29 H 1.08000 * 119.96974 * 179.97438 * 6 5 4 30 30 H 1.08003 * 120.02730 * 179.97438 * 7 6 5 31 31 H 1.09007 * 109.46672 * 59.99962 * 10 9 8 32 32 H 1.09006 * 109.47158 * 300.00755 * 10 9 8 33 33 H 1.09000 * 109.46782 * 60.00442 * 11 10 9 34 34 H 1.08995 * 109.47059 * 300.00625 * 11 10 9 35 35 H 1.09000 * 109.47014 * 60.00461 * 12 11 10 36 36 H 1.08997 * 109.46812 * 300.00208 * 12 11 10 37 37 H 0.97005 * 120.00050 * 0.02562 * 15 13 12 38 38 H 1.09003 * 113.61452 * 334.57116 * 18 16 15 39 39 H 1.09002 * 113.69501 * 203.67885 * 18 16 15 40 40 H 0.96696 * 114.00036 * 179.97438 * 21 19 18 41 41 H 1.09001 * 113.61225 * 156.33047 * 22 16 15 42 42 H 1.08998 * 113.61260 * 25.43058 * 22 16 15 43 43 H 1.07995 * 120.03120 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 2.7262 -0.0382 -2.1400 6 6 3.1883 -0.6872 -3.2702 7 6 2.8563 -2.0092 -3.4933 8 6 2.0587 -2.6862 -2.5819 9 8 1.7311 -3.9871 -2.7988 10 6 2.2421 -4.5955 -3.9865 11 6 1.7718 -6.0497 -4.0577 12 6 2.3195 -6.7013 -5.3291 13 6 1.8557 -8.1334 -5.3994 14 8 1.1557 -8.5880 -4.5196 15 7 2.2181 -8.9087 -6.4406 16 6 1.7678 -10.3011 -6.5088 17 1 0.8580 -10.4801 -5.9357 18 6 1.7150 -10.8622 -7.9396 19 6 3.1790 -11.2895 -7.7418 20 1 3.4094 -12.2672 -8.1649 21 8 4.1241 -10.2856 -8.1172 22 6 2.8830 -11.3234 -6.2331 23 6 1.5929 -2.0317 -1.4509 24 1 -0.3934 0.4417 0.7650 25 1 1.7923 -0.5138 0.8901 26 1 3.5346 1.7703 0.0321 27 1 1.5614 2.4678 -1.2086 28 1 2.9859 0.9960 -1.9680 29 1 3.8088 -0.1596 -3.9795 30 1 3.2172 -2.5154 -4.3764 31 1 3.3316 -4.5668 -3.9695 32 1 1.8779 -4.0523 -4.8586 33 1 0.6823 -6.0788 -4.0745 34 1 2.1363 -6.5925 -3.1856 35 1 3.4090 -6.6722 -5.3119 36 1 1.9553 -6.1585 -6.2013 37 1 2.7777 -8.5449 -7.1445 38 1 1.5832 -10.0966 -8.7042 39 1 1.0276 -11.6999 -8.0565 40 1 5.0466 -10.5483 -7.9948 41 1 2.5146 -12.2873 -5.8820 42 1 3.6939 -10.9302 -5.6201 43 1 0.9690 -2.5555 -0.7419 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_4549616.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:20 Heat of formation + Delta-G solvation = -102.313014 kcal Electronic energy + Delta-G solvation = -24219.355477 eV Core-core repulsion = 20425.362037 eV Total energy + Delta-G solvation = -3793.993440 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.40123 -41.17348 -39.73466 -39.02468 -37.30437 -36.16790 -34.87633 -33.77902 -32.54825 -31.22555 -28.52711 -26.89070 -26.80104 -25.42351 -23.68093 -23.37931 -21.76117 -21.43343 -20.63040 -18.95176 -18.62633 -18.38388 -17.91122 -17.47573 -17.37192 -16.97908 -16.93104 -16.38705 -16.13044 -15.81151 -15.40705 -15.32218 -14.87313 -14.57762 -14.51570 -14.22243 -14.02729 -13.76405 -13.71226 -13.38298 -13.25507 -13.17683 -12.75672 -12.54042 -12.44082 -12.39378 -12.21168 -12.00056 -11.68835 -11.62917 -11.56823 -10.88991 -10.78458 -10.38371 -10.01455 -9.82838 -9.19342 -4.95257 0.24571 0.44263 1.28408 1.65400 1.65900 1.90420 1.99956 2.34567 2.68315 2.91072 3.37758 3.39476 3.53939 3.67402 3.73325 3.78226 3.82949 3.85487 3.93555 4.00516 4.00775 4.14674 4.22033 4.24665 4.29367 4.32704 4.45313 4.54972 4.55225 4.58937 4.66252 4.71555 4.81219 4.87905 4.93574 4.99162 5.01214 5.17968 5.29969 5.38926 5.48053 5.58198 5.71398 6.44689 6.45379 6.58159 6.64190 7.27087 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.074 4.074 3 Si 0.688 3.312 4 C -0.036 4.036 5 C -0.164 4.164 6 C -0.072 4.072 7 C -0.206 4.206 8 C 0.135 3.865 9 O -0.310 6.310 10 C 0.059 3.941 11 C -0.104 4.104 12 C -0.137 4.137 13 C 0.515 3.485 14 O -0.537 6.537 15 N -0.708 5.708 16 C 0.124 3.876 17 H 0.104 0.896 18 C -0.142 4.142 19 C 0.077 3.923 20 H 0.072 0.928 21 O -0.554 6.554 22 C -0.185 4.185 23 C -0.122 4.122 24 H 0.383 0.617 25 H 0.077 0.923 26 H -0.255 1.255 27 H -0.251 1.251 28 H 0.119 0.881 29 H 0.130 0.870 30 H 0.132 0.868 31 H 0.064 0.936 32 H 0.064 0.936 33 H 0.084 0.916 34 H 0.083 0.917 35 H 0.098 0.902 36 H 0.098 0.902 37 H 0.408 0.592 38 H 0.083 0.917 39 H 0.110 0.890 40 H 0.385 0.615 41 H 0.099 0.901 42 H 0.077 0.923 43 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.318 -0.183 -1.579 3.679 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.184 4.184 3 Si 0.589 3.411 4 C -0.036 4.036 5 C -0.182 4.182 6 C -0.090 4.090 7 C -0.224 4.224 8 C 0.089 3.911 9 O -0.224 6.224 10 C -0.016 4.016 11 C -0.142 4.142 12 C -0.177 4.177 13 C 0.302 3.698 14 O -0.414 6.414 15 N -0.360 5.360 16 C 0.018 3.982 17 H 0.122 0.878 18 C -0.180 4.180 19 C 0.017 3.983 20 H 0.090 0.910 21 O -0.361 6.361 22 C -0.224 4.224 23 C -0.141 4.141 24 H 0.231 0.769 25 H 0.095 0.905 26 H -0.180 1.180 27 H -0.175 1.175 28 H 0.137 0.863 29 H 0.148 0.852 30 H 0.149 0.851 31 H 0.082 0.918 32 H 0.083 0.917 33 H 0.103 0.897 34 H 0.102 0.898 35 H 0.116 0.884 36 H 0.116 0.884 37 H 0.244 0.756 38 H 0.101 0.899 39 H 0.128 0.872 40 H 0.233 0.767 41 H 0.118 0.882 42 H 0.095 0.905 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 2.721 -0.034 -1.958 3.353 hybrid contribution 1.105 -0.749 -0.693 1.504 sum 3.826 -0.783 -2.651 4.720 Atomic orbital electron populations 1.86500 1.17019 1.81856 1.49676 1.24734 0.85890 1.10501 0.97314 0.95373 0.80535 0.77813 0.87340 1.19131 0.96453 0.93211 0.94848 1.20765 1.02167 0.99304 0.95936 1.20847 0.97895 0.93849 0.96403 1.21295 1.03663 0.96346 1.01123 1.19001 0.94216 0.83520 0.94360 1.86082 1.70941 1.22268 1.43073 1.22841 0.98594 0.93968 0.86217 1.21228 1.03060 0.92175 0.97777 1.21518 1.03036 0.92928 1.00235 1.20589 0.79873 0.87940 0.81417 1.90740 1.37397 1.75054 1.38174 1.45698 1.53590 1.11357 1.25400 1.21748 0.98097 0.81139 0.97224 0.87833 1.23454 0.95127 1.02262 0.97177 1.22801 0.90088 0.91157 0.94215 0.91019 1.86350 1.19250 1.42343 1.88128 1.24137 1.00196 1.00519 0.97573 1.20245 1.02575 0.93918 0.97329 0.76938 0.90515 1.17998 1.17523 0.86347 0.85245 0.85069 0.91761 0.91728 0.89748 0.89806 0.88377 0.88361 0.75579 0.89854 0.87221 0.76671 0.88250 0.90465 0.84584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.63 12.74 -35.23 -0.45 -1.08 16 2 C -0.07 -0.07 2.81 36.00 0.10 0.03 16 3 Si 0.69 -0.33 29.79 -169.99 -5.06 -5.40 16 4 C -0.04 -0.13 5.42 -104.65 -0.57 -0.70 16 5 C -0.16 -0.53 8.67 -39.56 -0.34 -0.87 16 6 C -0.07 -0.16 10.04 -39.61 -0.40 -0.55 16 7 C -0.21 -0.45 9.04 -39.44 -0.36 -0.80 16 8 C 0.13 0.51 6.69 -39.22 -0.26 0.25 16 9 O -0.31 -1.13 10.14 -19.43 -0.20 -1.33 16 10 C 0.06 0.01 4.74 37.16 0.18 0.19 16 11 C -0.10 -0.07 4.87 -26.73 -0.13 -0.20 16 12 C -0.14 0.19 5.70 -27.88 -0.16 0.03 16 13 C 0.52 0.94 7.83 -10.99 -0.09 0.86 16 14 O -0.54 -3.29 15.58 5.56 0.09 -3.21 16 15 N -0.71 -0.04 5.15 -53.02 -0.27 -0.31 16 16 C 0.12 0.02 4.32 -67.12 -0.29 -0.27 16 17 H 0.10 0.18 7.46 -51.93 -0.39 -0.21 16 18 C -0.14 0.23 7.66 -25.92 -0.20 0.03 16 19 C 0.08 -0.15 5.28 -25.92 -0.14 -0.29 16 20 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 21 O -0.55 1.02 12.31 -35.23 -0.43 0.58 16 22 C -0.19 0.20 7.71 -25.92 -0.20 0.00 16 23 C -0.12 -0.51 9.55 -39.43 -0.38 -0.89 16 24 H 0.38 -1.57 8.74 45.56 0.40 -1.17 16 25 H 0.08 -0.06 7.96 -51.93 -0.41 -0.47 16 26 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 27 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 28 H 0.12 0.29 4.87 -52.48 -0.26 0.03 16 29 H 0.13 -0.03 8.06 -52.49 -0.42 -0.46 16 30 H 0.13 -0.04 6.30 -52.48 -0.33 -0.37 16 31 H 0.06 -0.08 7.66 -51.93 -0.40 -0.48 16 32 H 0.06 -0.07 7.66 -51.93 -0.40 -0.46 16 33 H 0.08 0.19 8.10 -51.93 -0.42 -0.23 16 34 H 0.08 0.18 8.10 -51.93 -0.42 -0.25 16 35 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 36 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 37 H 0.41 -0.58 7.59 -40.82 -0.31 -0.89 16 38 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 39 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 40 H 0.39 -2.00 9.12 45.56 0.42 -1.59 16 41 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 42 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 43 H 0.14 0.52 8.06 -52.49 -0.42 0.10 16 LS Contribution 356.93 15.07 5.38 5.38 Total: 0.00 -10.05 356.93 -9.70 -19.75 By element: Atomic # 1 Polarization: -5.69 SS G_CDS: -5.52 Total: -11.21 kcal Atomic # 6 Polarization: 0.04 SS G_CDS: -3.23 Total: -3.18 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: -0.27 Total: -0.31 kcal Atomic # 8 Polarization: -4.04 SS G_CDS: -0.99 Total: -5.03 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.06 Total: -5.40 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -10.05 -9.70 -19.75 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_4549616.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.560 kcal (2) G-P(sol) polarization free energy of solvation -10.054 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.613 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.700 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.753 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.313 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds