Wall clock time and date at job start Sun Mar 7 2021 22:02:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.36545 * 126.64618 * 2 1 4 4 C 1.46656 * 125.98594 * 0.02562 * 3 2 1 5 5 O 1.21689 * 120.00012 * 359.97438 * 4 3 2 6 6 N 1.34773 * 119.99830 * 179.97438 * 4 3 2 7 7 C 1.46499 * 120.00301 * 179.97438 * 6 4 3 8 8 H 1.09004 * 112.84485 * 334.66913 * 7 6 4 9 9 C 1.53778 * 113.61684 * 105.86206 * 7 6 4 10 10 C 1.54045 * 86.98754 * 89.16479 * 9 7 6 11 11 H 1.08999 * 113.70011 * 139.98984 * 10 9 7 12 12 O 1.42906 * 113.61249 * 270.88929 * 10 9 7 13 13 C 1.53780 * 113.61975 * 203.47237 * 7 6 4 14 14 O 1.34918 * 108.02340 * 179.87390 * 3 2 1 15 15 C 1.33928 * 109.38200 * 0.40173 * 14 3 2 16 16 C 1.50700 * 125.61586 * 179.73208 * 15 14 3 17 17 O 1.42902 * 109.47123 * 270.02461 * 16 15 14 18 18 C 1.35903 * 116.99775 * 179.97438 * 17 16 15 19 19 C 1.38722 * 120.05798 * 359.73114 * 18 17 16 20 20 C 1.38152 * 119.94484 * 179.74407 * 19 18 17 21 21 C 1.38257 * 120.05131 * 0.50252 * 20 19 18 22 22 C 1.50705 * 119.94303 * 179.74796 * 21 20 19 23 23 O 1.42895 * 109.47268 * 245.02077 * 22 21 20 24 24 Si 1.86299 * 109.46949 * 5.02357 * 22 21 20 25 25 C 1.38262 * 120.11635 * 359.76780 * 21 20 19 26 26 C 1.38148 * 120.05351 * 359.97438 * 25 21 20 27 27 C 1.35127 * 108.77212 * 359.75090 * 15 14 3 28 28 H 1.09002 * 109.47152 * 269.70944 * 1 2 3 29 29 H 1.09001 * 109.46980 * 149.71045 * 1 2 3 30 30 H 1.09004 * 109.47113 * 29.71025 * 1 2 3 31 31 H 0.97004 * 120.00078 * 359.97438 * 6 4 3 32 32 H 1.09002 * 113.61547 * 203.67129 * 9 7 6 33 33 H 1.09002 * 113.61540 * 334.56833 * 9 7 6 34 34 H 0.96695 * 113.99801 * 277.48496 * 12 10 9 35 35 H 1.09006 * 113.61133 * 25.43022 * 13 7 6 36 36 H 1.08998 * 113.61602 * 156.25022 * 13 7 6 37 37 H 1.09008 * 109.46841 * 30.02136 * 16 15 14 38 38 H 1.08997 * 109.47406 * 150.02216 * 16 15 14 39 39 H 1.07999 * 120.03170 * 359.97438 * 19 18 17 40 40 H 1.08003 * 119.97265 * 180.23267 * 20 19 18 41 41 H 1.09005 * 109.46952 * 125.01905 * 22 21 20 42 42 H 0.96703 * 114.00145 * 179.97438 * 23 22 21 43 43 H 1.48507 * 110.00003 * 178.67955 * 24 22 21 44 44 H 1.48500 * 110.00031 * 299.99910 * 24 22 21 45 45 H 1.08006 * 119.97639 * 179.97438 * 25 21 20 46 46 H 1.08005 * 120.02702 * 179.97438 * 26 25 21 47 47 H 1.07996 * 126.44533 * 179.97438 * 27 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3220 1.0956 0.0000 4 6 1.8843 2.4953 0.0005 5 8 0.6968 2.7614 0.0006 6 7 2.7971 3.4868 0.0010 7 6 2.3599 4.8850 0.0010 8 1 1.3672 5.0180 -0.4292 9 6 2.5431 5.5878 1.3564 10 6 3.9542 5.9735 0.8739 11 1 4.2498 6.9860 1.1490 12 8 4.9522 4.9997 1.1868 13 6 3.4097 5.8588 -0.5597 14 8 3.6006 0.6647 0.0028 15 6 3.6183 -0.6744 -0.0042 16 6 4.8550 -1.5357 -0.0096 17 8 5.2453 -1.8003 -1.3586 18 6 6.3511 -2.5689 -1.5414 19 6 7.0494 -3.0536 -0.4451 20 6 8.1702 -3.8390 -0.6336 21 6 8.6020 -4.1335 -1.9136 22 6 9.8282 -4.9858 -2.1164 23 8 10.8517 -4.2073 -2.7395 24 14 10.4350 -5.6032 -0.4668 25 6 7.9110 -3.6470 -3.0079 26 6 6.7866 -2.8655 -2.8247 27 6 2.3448 -1.1262 -0.0062 28 1 -0.3633 -0.0052 1.0277 29 1 -0.3633 -0.8874 -0.5183 30 1 -0.3633 0.8926 -0.5093 31 1 3.7436 3.2746 0.0013 32 1 1.8813 6.4423 1.4982 33 1 2.5420 4.9049 2.2060 34 1 5.2986 5.0668 2.0871 35 1 4.1080 5.3945 -1.2562 36 1 2.9844 6.7867 -0.9422 37 1 5.6620 -1.0158 0.5068 38 1 4.6448 -2.4765 0.4990 39 1 6.7151 -2.8202 0.5550 40 1 8.7120 -4.2197 0.2196 41 1 9.5792 -5.8349 -2.7529 42 1 11.6722 -4.6930 -2.9006 43 1 11.6252 -6.4710 -0.6558 44 1 10.7778 -4.4551 0.4104 45 1 8.2506 -3.8780 -4.0069 46 1 6.2474 -2.4854 -3.6799 47 1 2.0306 -2.1594 -0.0119 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_4549632.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:28 Heat of formation + Delta-G solvation = -73.584693 kcal Electronic energy + Delta-G solvation = -31132.018541 eV Core-core repulsion = 26635.910241 eV Total energy + Delta-G solvation = -4496.108300 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -43.96515 -41.37372 -41.22935 -39.63841 -39.15859 -37.37994 -36.21507 -35.30691 -34.04255 -33.14244 -32.05114 -31.61824 -28.93144 -28.39099 -26.81079 -26.20873 -25.46574 -24.08956 -22.93805 -22.59040 -22.11959 -20.95213 -20.58225 -19.48506 -19.44412 -18.54558 -18.18020 -17.76723 -17.48919 -17.25381 -16.87494 -16.79114 -16.55154 -16.20426 -15.79849 -15.63558 -15.54115 -15.35168 -15.07836 -14.70148 -14.47072 -14.32258 -14.12843 -14.02814 -13.94873 -13.74540 -13.68123 -13.61971 -13.54995 -13.36975 -12.86036 -12.69251 -12.47450 -12.37891 -12.21242 -11.87513 -11.71777 -11.54045 -11.34497 -10.82746 -10.73355 -10.46531 -10.30581 -10.03429 -9.73329 -9.23644 -4.91839 -0.29538 0.26794 0.31281 0.94839 1.32295 1.33903 1.61105 1.90487 1.93852 1.95769 2.35571 2.61479 3.08053 3.27736 3.42984 3.44455 3.59111 3.62272 3.73291 3.74962 3.79523 3.83442 3.98026 4.00635 4.07806 4.11038 4.27221 4.29828 4.40929 4.44354 4.47843 4.55335 4.65163 4.69411 4.69608 4.71247 4.75649 4.80164 4.93503 4.95375 4.97199 4.97861 5.06772 5.16056 5.25218 5.28946 5.44069 5.51053 5.67236 5.68600 6.27848 6.30045 6.60545 6.80612 6.88081 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.093 4.093 3 C -0.097 4.097 4 C 0.601 3.399 5 O -0.547 6.547 6 N -0.688 5.688 7 C 0.107 3.893 8 H 0.094 0.906 9 C -0.178 4.178 10 C 0.081 3.919 11 H 0.093 0.907 12 O -0.571 6.571 13 C -0.136 4.136 14 O -0.164 6.164 15 C 0.009 3.991 16 C 0.135 3.865 17 O -0.326 6.326 18 C 0.125 3.875 19 C -0.202 4.202 20 C -0.080 4.080 21 C -0.123 4.123 22 C -0.083 4.083 23 O -0.560 6.560 24 Si 0.765 3.235 25 C -0.061 4.061 26 C -0.162 4.162 27 C -0.184 4.184 28 H 0.081 0.919 29 H 0.089 0.911 30 H 0.069 0.931 31 H 0.414 0.586 32 H 0.116 0.884 33 H 0.065 0.935 34 H 0.399 0.601 35 H 0.074 0.926 36 H 0.133 0.867 37 H 0.099 0.901 38 H 0.135 0.865 39 H 0.160 0.840 40 H 0.146 0.854 41 H 0.094 0.906 42 H 0.394 0.606 43 H -0.289 1.289 44 H -0.297 1.297 45 H 0.137 0.863 46 H 0.134 0.866 47 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.933 -2.510 3.432 4.671 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.096 4.096 3 C -0.149 4.149 4 C 0.388 3.612 5 O -0.427 6.427 6 N -0.338 5.338 7 C 0.002 3.998 8 H 0.112 0.888 9 C -0.217 4.217 10 C 0.022 3.978 11 H 0.111 0.889 12 O -0.380 6.380 13 C -0.174 4.174 14 O -0.060 6.060 15 C -0.043 4.043 16 C 0.062 3.938 17 O -0.241 6.241 18 C 0.080 3.920 19 C -0.220 4.220 20 C -0.098 4.098 21 C -0.123 4.123 22 C -0.192 4.192 23 O -0.370 6.370 24 Si 0.671 3.329 25 C -0.079 4.079 26 C -0.181 4.181 27 C -0.203 4.203 28 H 0.100 0.900 29 H 0.108 0.892 30 H 0.088 0.912 31 H 0.252 0.748 32 H 0.135 0.865 33 H 0.084 0.916 34 H 0.249 0.751 35 H 0.093 0.907 36 H 0.151 0.849 37 H 0.117 0.883 38 H 0.153 0.847 39 H 0.178 0.822 40 H 0.163 0.837 41 H 0.111 0.889 42 H 0.244 0.756 43 H -0.217 1.217 44 H -0.224 1.224 45 H 0.155 0.845 46 H 0.152 0.848 47 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 1.317 -1.747 3.279 3.942 hybrid contribution 1.413 0.353 -0.268 1.481 sum 2.731 -1.394 3.011 4.297 Atomic orbital electron populations 1.20462 0.87234 1.03901 1.03463 1.21000 0.98524 0.91168 0.98944 1.21866 0.81779 0.94875 1.16416 1.16662 0.85605 0.82419 0.76498 1.90833 1.16687 1.82780 1.52401 1.45594 1.10112 1.05360 1.72750 1.22044 0.99408 0.79724 0.98628 0.88791 1.24182 0.99168 1.01489 0.96853 1.22877 0.86793 0.92300 0.95863 0.88939 1.86347 1.56951 1.56775 1.37880 1.23511 0.96995 1.00504 0.96394 1.83984 1.28189 1.22785 1.71081 1.22462 0.97128 0.80212 1.04467 1.21269 0.91576 0.98306 0.82699 1.86107 1.42273 1.66569 1.29133 1.19079 0.86554 0.91717 0.94679 1.21452 0.98394 1.03051 0.99086 1.21031 0.96040 0.96260 0.96457 1.19423 0.96986 1.02165 0.93739 1.24985 0.88636 0.96193 1.09363 1.86553 1.26831 1.42294 1.81350 0.94197 0.84118 0.79266 0.75355 1.20958 0.92831 0.94613 0.99532 1.20642 0.99136 1.02909 0.95416 1.21905 0.90659 1.01304 1.06409 0.90002 0.89218 0.91250 0.74836 0.86527 0.91606 0.75052 0.90739 0.84897 0.88306 0.84742 0.82212 0.83671 0.88857 0.75595 1.21681 1.22429 0.84507 0.84801 0.79518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.42 9.82 71.24 0.70 0.28 16 2 C -0.09 -0.62 6.20 -19.74 -0.12 -0.75 16 3 C -0.10 -0.88 7.13 24.07 0.17 -0.71 16 4 C 0.60 6.33 7.79 86.44 0.67 7.00 16 5 O -0.55 -8.30 14.35 -4.31 -0.06 -8.36 16 6 N -0.69 -4.06 5.13 -444.03 -2.28 -6.34 16 7 C 0.11 0.28 4.29 45.52 0.20 0.48 16 8 H 0.09 0.47 7.50 -2.38 -0.02 0.45 16 9 C -0.18 0.21 7.73 31.21 0.24 0.45 16 10 C 0.08 -0.25 5.28 31.21 0.16 -0.08 16 11 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 12 O -0.57 0.72 12.34 -148.98 -1.84 -1.12 16 13 C -0.14 0.27 7.65 31.12 0.24 0.50 16 14 O -0.16 -1.16 10.40 -5.05 -0.05 -1.22 16 15 C 0.01 0.03 6.94 24.97 0.17 0.20 16 16 C 0.14 -0.34 5.27 71.24 0.38 0.04 16 17 O -0.33 -1.11 10.12 -92.46 -0.94 -2.04 16 18 C 0.12 0.35 6.69 22.50 0.15 0.50 16 19 C -0.20 0.20 9.04 22.37 0.20 0.40 16 20 C -0.08 0.02 8.66 22.25 0.19 0.21 16 21 C -0.12 -0.24 5.38 -19.85 -0.11 -0.35 16 22 C -0.08 0.07 2.79 71.24 0.20 0.27 16 23 O -0.56 -1.30 12.81 -148.98 -1.91 -3.21 16 24 Si 0.76 -2.12 29.85 68.60 2.05 -0.08 16 25 C -0.06 -0.18 9.68 22.25 0.22 0.03 16 26 C -0.16 -0.62 9.99 22.37 0.22 -0.39 16 27 C -0.18 -0.41 10.73 22.07 0.24 -0.17 16 28 H 0.08 0.26 8.14 -2.39 -0.02 0.24 16 29 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 30 H 0.07 0.60 6.43 -2.38 -0.02 0.59 16 31 H 0.41 2.06 7.39 -92.71 -0.68 1.37 16 32 H 0.12 -0.51 8.14 -2.39 -0.02 -0.53 16 33 H 0.07 0.10 8.14 -2.39 -0.02 0.08 16 34 H 0.40 -3.37 9.12 -74.06 -0.68 -4.04 16 35 H 0.07 0.03 8.14 -2.38 -0.02 0.01 16 36 H 0.13 -0.85 8.14 -2.39 -0.02 -0.87 16 37 H 0.10 -0.51 7.65 -2.38 -0.02 -0.53 16 38 H 0.14 -1.22 7.68 -2.39 -0.02 -1.24 16 39 H 0.16 -1.16 6.30 -2.91 -0.02 -1.18 16 40 H 0.15 -0.60 4.86 -2.91 -0.01 -0.61 16 41 H 0.09 -0.44 7.96 -2.38 -0.02 -0.46 16 42 H 0.39 -2.23 8.74 -74.06 -0.65 -2.88 16 43 H -0.29 -0.50 7.11 99.48 0.71 0.20 16 44 H -0.30 -1.19 7.05 99.48 0.70 -0.49 16 45 H 0.14 0.14 8.06 -2.91 -0.02 0.11 16 46 H 0.13 0.37 8.06 -2.91 -0.02 0.34 16 47 H 0.19 -0.72 8.06 -2.91 -0.02 -0.74 16 Total: 0.00 -23.41 395.00 -1.83 -25.25 By element: Atomic # 1 Polarization: -9.86 SS G_CDS: -0.93 Total: -10.79 kcal Atomic # 6 Polarization: 3.78 SS G_CDS: 4.12 Total: 7.90 kcal Atomic # 7 Polarization: -4.06 SS G_CDS: -2.28 Total: -6.34 kcal Atomic # 8 Polarization: -11.15 SS G_CDS: -4.80 Total: -15.95 kcal Atomic # 14 Polarization: -2.12 SS G_CDS: 2.05 Total: -0.08 kcal Total: -23.41 -1.83 -25.25 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_4549632.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.339 kcal (2) G-P(sol) polarization free energy of solvation -23.412 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.751 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.834 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.246 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds