Wall clock time and date at job start Sun Mar 7 2021 22:02:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.36000 * 116.99698 * 2 1 4 4 C 1.39160 * 120.07095 * 180.02562 * 3 2 1 5 5 O 1.35994 * 120.07464 * 359.97438 * 4 3 2 6 6 C 1.42900 * 116.99942 * 179.72737 * 5 4 3 7 7 C 1.50703 * 109.46859 * 179.97438 * 6 5 4 8 8 O 1.21277 * 119.99948 * 0.02562 * 7 6 5 9 9 N 1.34779 * 119.99369 * 180.02562 * 7 6 5 10 10 C 1.46496 * 119.99390 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.91246 * 23.74616 * 10 9 7 12 12 C 1.53786 * 113.61518 * 154.99856 * 10 9 7 13 13 C 1.53781 * 87.17350 * 89.15486 * 12 10 9 14 14 H 1.09001 * 113.61695 * 139.93969 * 13 12 10 15 15 O 1.42902 * 113.61735 * 270.76044 * 13 12 10 16 16 C 1.53782 * 87.08260 * 25.39213 * 13 12 10 17 17 C 1.38566 * 119.84889 * 179.72843 * 4 3 2 18 18 C 1.38237 * 120.00178 * 0.27082 * 17 4 3 19 19 N 1.48010 * 119.92701 * 180.02562 * 18 17 4 20 20 O 1.21800 * 119.99789 * 359.97438 * 19 18 17 21 21 O 1.21795 * 119.99788 * 180.02562 * 19 18 17 22 22 C 1.38247 * 120.14676 * 359.97438 * 18 17 4 23 23 C 1.50704 * 119.92577 * 179.97438 * 22 18 17 24 24 O 1.42898 * 109.47232 * 75.00370 * 23 22 18 25 25 Si 1.86304 * 109.47230 * 194.99927 * 23 22 18 26 26 C 1.38244 * 120.15161 * 0.02562 * 22 18 17 27 27 H 1.08998 * 109.47908 * 60.00256 * 1 2 3 28 28 H 1.09005 * 109.47134 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47595 * 299.99907 * 1 2 3 30 30 H 1.09002 * 109.47129 * 60.00013 * 6 5 4 31 31 H 1.09002 * 109.46992 * 300.00118 * 6 5 4 32 32 H 0.97001 * 120.00492 * 359.97438 * 9 7 6 33 33 H 1.09002 * 113.61357 * 334.56403 * 12 10 9 34 34 H 1.09002 * 113.61608 * 203.74565 * 12 10 9 35 35 H 0.96694 * 114.00074 * 180.02562 * 15 13 12 36 36 H 1.08997 * 113.61668 * 89.11298 * 16 13 12 37 37 H 1.08994 * 113.61387 * 220.02033 * 16 13 12 38 38 H 1.08002 * 119.99529 * 180.25120 * 17 4 3 39 39 H 1.08993 * 109.47252 * 315.00193 * 23 22 18 40 40 H 0.96703 * 114.00186 * 59.99232 * 24 23 22 41 41 H 1.48495 * 110.00331 * 179.97438 * 25 23 22 42 42 H 1.48496 * 109.99916 * 301.32203 * 25 23 22 43 43 H 1.07999 * 120.00480 * 180.02562 * 26 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2118 0.0000 4 6 3.4359 1.2864 -0.0005 5 8 4.1795 0.1478 -0.0005 6 6 5.6003 0.3009 -0.0072 7 6 6.2519 -1.0580 -0.0055 8 8 5.5670 -2.0589 0.0003 9 7 7.5957 -1.1609 -0.0104 10 6 8.2291 -2.4818 -0.0094 11 1 7.5824 -3.2629 -0.4091 12 6 9.6447 -2.4867 -0.6104 13 6 10.1639 -2.1799 0.8042 14 1 11.0769 -2.7175 1.0604 15 8 10.2426 -0.7829 1.0947 16 6 8.8852 -2.8501 1.3339 17 6 4.0601 2.5235 -0.0062 18 6 3.3027 3.6799 -0.0057 19 7 3.9712 5.0005 -0.0124 20 8 5.1873 5.0673 -0.0178 21 8 3.3051 6.0201 -0.0114 22 6 1.9222 3.6057 0.0000 23 6 1.1014 4.8696 0.0011 24 8 1.1291 5.4568 -1.3014 25 14 -0.6579 4.4672 0.4634 26 6 1.2930 2.3748 0.0057 27 1 -0.3635 0.5138 -0.8899 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 5.9103 0.8532 0.8799 31 1 5.9026 0.8482 -0.9000 32 1 8.1435 -0.3603 -0.0154 33 1 9.8189 -1.6812 -1.3238 34 1 9.9554 -3.4610 -0.9878 35 1 10.5689 -0.5836 1.9828 36 1 8.9870 -3.9242 1.4885 37 1 8.4464 -2.3378 2.1901 38 1 5.1384 2.5842 -0.0108 39 1 1.5158 5.5714 0.7248 40 1 0.7745 4.8868 -1.9974 41 1 -1.4777 5.7053 0.4688 42 1 -1.2240 3.4868 -0.4975 43 1 0.2144 2.3196 0.0097 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_4549636.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:37 Heat of formation + Delta-G solvation = -107.353820 kcal Electronic energy + Delta-G solvation = -32121.423772 eV Core-core repulsion = 27333.050738 eV Total energy + Delta-G solvation = -4788.373034 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.128 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -43.20937 -42.10108 -41.43001 -40.27177 -39.38691 -39.08683 -37.55696 -37.11728 -36.17985 -34.07411 -32.69507 -32.52701 -29.94594 -28.98570 -27.84960 -26.93480 -25.99792 -25.31830 -23.87480 -23.17010 -21.98514 -20.82187 -20.62216 -19.69202 -19.57018 -18.94413 -18.56802 -18.43585 -18.15320 -17.79003 -17.64267 -17.45408 -16.99587 -16.89267 -16.55660 -16.38615 -16.20493 -15.71183 -15.54138 -15.35039 -15.08071 -14.78598 -14.52575 -14.13698 -13.81480 -13.77508 -13.62925 -13.46389 -13.15801 -12.82611 -12.70545 -12.58000 -12.53919 -12.44878 -12.24059 -12.15420 -11.90998 -11.62510 -11.61932 -11.00194 -10.87041 -10.66814 -10.53519 -10.16423 -9.51367 -5.17491 -1.19699 -0.49083 0.34941 0.45964 1.02334 1.16502 1.32044 1.40920 1.72862 1.78851 1.89138 2.25983 2.86224 2.92525 3.10032 3.21219 3.31589 3.32390 3.41865 3.44299 3.60367 3.65643 3.70220 3.77642 3.81678 3.88034 3.93699 3.96694 4.00080 4.18690 4.27611 4.38985 4.51022 4.53988 4.59523 4.66692 4.69499 4.70643 4.83065 4.85846 5.39310 5.48791 5.50652 5.94307 6.27565 6.33530 6.48479 6.81748 7.05955 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.284 6.284 3 C 0.170 3.830 4 C 0.110 3.890 5 O -0.265 6.265 6 C 0.032 3.968 7 C 0.520 3.480 8 O -0.512 6.512 9 N -0.702 5.702 10 C 0.126 3.874 11 H 0.106 0.894 12 C -0.141 4.141 13 C 0.077 3.923 14 H 0.073 0.927 15 O -0.555 6.555 16 C -0.185 4.185 17 C -0.118 4.118 18 C -0.024 4.024 19 N 0.032 4.968 20 O -0.175 6.175 21 O -0.129 6.129 22 C -0.040 4.040 23 C -0.083 4.083 24 O -0.504 6.504 25 Si 0.686 3.314 26 C -0.185 4.185 27 H 0.061 0.939 28 H 0.114 0.886 29 H 0.067 0.933 30 H 0.101 0.899 31 H 0.100 0.900 32 H 0.410 0.590 33 H 0.084 0.916 34 H 0.111 0.889 35 H 0.386 0.614 36 H 0.101 0.899 37 H 0.078 0.922 38 H 0.167 0.833 39 H 0.142 0.858 40 H 0.370 0.630 41 H -0.245 1.245 42 H -0.257 1.257 43 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.506 -4.177 2.627 4.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.196 6.196 3 C 0.121 3.879 4 C 0.063 3.937 5 O -0.177 6.177 6 C -0.046 4.046 7 C 0.304 3.696 8 O -0.385 6.385 9 N -0.356 5.356 10 C 0.021 3.979 11 H 0.124 0.876 12 C -0.179 4.179 13 C 0.017 3.983 14 H 0.091 0.909 15 O -0.361 6.361 16 C -0.224 4.224 17 C -0.138 4.138 18 C -0.108 4.108 19 N 0.551 4.449 20 O -0.385 6.385 21 O -0.349 6.349 22 C -0.042 4.042 23 C -0.192 4.192 24 O -0.309 6.309 25 Si 0.586 3.414 26 C -0.204 4.204 27 H 0.080 0.920 28 H 0.132 0.868 29 H 0.085 0.915 30 H 0.118 0.882 31 H 0.118 0.882 32 H 0.247 0.753 33 H 0.103 0.897 34 H 0.130 0.870 35 H 0.235 0.765 36 H 0.119 0.881 37 H 0.097 0.903 38 H 0.184 0.816 39 H 0.160 0.840 40 H 0.217 0.783 41 H -0.169 1.169 42 H -0.182 1.182 43 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -1.075 -5.419 2.102 5.911 hybrid contribution 0.998 0.866 -0.594 1.449 sum -0.077 -4.554 1.508 4.797 Atomic orbital electron populations 1.23389 0.76913 1.05670 1.02033 1.86341 1.22363 1.24303 1.86545 1.18449 0.89024 0.85870 0.94542 1.17863 0.88401 0.85363 1.02086 1.86332 1.16903 1.26043 1.88379 1.22648 0.80081 0.97226 1.04674 1.19846 0.82627 0.90128 0.77022 1.90795 1.62678 1.37810 1.47250 1.45466 1.05470 1.09506 1.75194 1.21817 0.93851 0.85424 0.96844 0.87575 1.23461 0.94443 1.03729 0.96302 1.22798 0.96696 0.82235 0.96537 0.90909 1.86347 1.89066 1.22463 1.38218 1.24179 0.97578 1.02193 0.98440 1.20812 1.02236 0.88967 1.01783 1.20393 0.91944 0.83156 1.15272 1.43372 1.00981 1.02587 0.97929 1.94547 0.95786 1.93713 1.54439 1.94573 1.64492 1.24103 1.51774 1.19996 0.91516 0.96869 0.95838 1.25415 1.09390 0.94109 0.90298 1.86813 1.84666 1.43909 1.15470 0.95246 0.74269 0.82133 0.89797 1.21101 1.01277 0.89708 1.08346 0.91997 0.86773 0.91466 0.88152 0.88233 0.75325 0.89707 0.87046 0.76536 0.88075 0.90339 0.81600 0.84023 0.78300 1.16860 1.18223 0.81985 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 101.05 0.99 0.95 16 2 O -0.28 -0.25 10.28 -34.24 -0.35 -0.60 16 3 C 0.17 0.07 6.70 -39.12 -0.26 -0.19 16 4 C 0.11 0.11 6.70 -39.12 -0.26 -0.15 16 5 O -0.26 -0.59 9.45 -47.35 -0.45 -1.04 16 6 C 0.03 -0.03 5.22 36.01 0.19 0.16 16 7 C 0.52 0.83 7.91 -10.98 -0.09 0.74 16 8 O -0.51 -3.19 16.10 -14.35 -0.23 -3.42 16 9 N -0.70 0.51 5.16 -52.92 -0.27 0.24 16 10 C 0.13 -0.09 4.33 -67.02 -0.29 -0.38 16 11 H 0.11 0.08 7.47 -51.93 -0.39 -0.31 16 12 C -0.14 0.34 7.65 -25.92 -0.20 0.14 16 13 C 0.08 -0.20 5.27 -25.92 -0.14 -0.34 16 14 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 15 O -0.55 1.35 12.34 -35.23 -0.43 0.92 16 16 C -0.18 0.35 7.72 -25.82 -0.20 0.15 16 17 C -0.12 -0.04 8.54 -39.46 -0.34 -0.37 16 18 C -0.02 -0.04 6.84 -79.95 -0.55 -0.59 16 19 N 0.03 0.14 4.45 33.96 0.15 0.29 16 20 O -0.17 -0.88 18.44 -29.46 -0.54 -1.43 16 21 O -0.13 -0.69 14.62 -35.97 -0.53 -1.21 16 22 C -0.04 0.00 5.26 -104.61 -0.55 -0.55 16 23 C -0.08 0.00 1.74 36.01 0.06 0.06 16 24 O -0.50 -0.74 11.79 -55.49 -0.65 -1.39 16 25 Si 0.69 -1.47 30.24 -169.99 -5.14 -6.61 16 26 C -0.19 0.24 7.64 -39.46 -0.30 -0.07 16 27 H 0.06 -0.26 7.67 -51.93 -0.40 -0.66 16 28 H 0.11 -0.50 8.14 -51.93 -0.42 -0.92 16 29 H 0.07 -0.34 7.65 -51.93 -0.40 -0.74 16 30 H 0.10 -0.34 7.66 -51.93 -0.40 -0.74 16 31 H 0.10 -0.33 7.66 -51.93 -0.40 -0.72 16 32 H 0.41 -0.99 7.61 -40.82 -0.31 -1.30 16 33 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 34 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 35 H 0.39 -2.20 9.12 45.56 0.42 -1.79 16 36 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 37 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.17 -0.25 5.85 -52.49 -0.31 -0.56 16 39 H 0.14 0.10 6.07 -51.93 -0.32 -0.22 16 40 H 0.37 -0.75 8.70 45.56 0.40 -0.35 16 41 H -0.24 -0.30 7.11 56.52 0.40 0.10 16 42 H -0.26 0.43 6.68 56.52 0.38 0.80 16 43 H 0.16 -0.56 3.09 -52.49 -0.16 -0.72 16 LS Contribution 365.42 15.07 5.51 5.51 Total: 0.00 -11.71 365.42 -8.89 -20.61 By element: Atomic # 1 Polarization: -7.39 SS G_CDS: -4.02 Total: -11.41 kcal Atomic # 6 Polarization: 1.49 SS G_CDS: -1.93 Total: -0.44 kcal Atomic # 7 Polarization: 0.65 SS G_CDS: -0.12 Total: 0.53 kcal Atomic # 8 Polarization: -4.99 SS G_CDS: -3.19 Total: -8.18 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: -5.14 Total: -6.61 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -11.71 -8.89 -20.61 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_4549636.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.748 kcal (2) G-P(sol) polarization free energy of solvation -11.711 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.460 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.894 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.605 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.354 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds