Wall clock time and date at job start Sun Mar 7 2021 22:02:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86294 * 109.47363 * 2 1 4 4 C 1.50707 * 109.46895 * 119.99882 * 2 1 3 5 5 C 1.38238 * 119.97430 * 245.01752 * 4 2 1 6 6 C 1.38287 * 120.11514 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05307 * 359.77399 * 6 5 4 8 8 C 1.38756 * 119.94161 * 0.50335 * 7 6 5 9 9 O 1.35900 * 120.05585 * 179.74245 * 8 7 6 10 10 C 1.42908 * 116.99740 * 359.73028 * 9 8 7 11 11 C 1.50693 * 109.47079 * 179.97438 * 10 9 8 12 12 C 1.39556 * 120.07721 * 180.02562 * 11 10 9 13 13 C 1.47851 * 120.14261 * 359.97438 * 12 11 10 14 14 O 1.21557 * 119.99710 * 0.02562 * 13 12 11 15 15 N 1.34769 * 120.00172 * 179.97438 * 13 12 11 16 16 C 1.46501 * 120.00014 * 179.97438 * 15 13 12 17 17 H 1.09001 * 112.90705 * 336.25937 * 16 15 13 18 18 C 1.53782 * 113.61142 * 107.50467 * 16 15 13 19 19 C 1.53962 * 87.11063 * 89.18830 * 18 16 15 20 20 H 1.09000 * 113.66569 * 139.88660 * 19 18 16 21 21 O 1.42894 * 113.61503 * 270.84416 * 19 18 16 22 22 C 1.53781 * 113.61619 * 205.00312 * 16 15 13 23 23 C 1.39596 * 119.71483 * 180.27346 * 12 11 10 24 24 C 1.37932 * 119.85256 * 359.46346 * 23 12 11 25 25 C 1.38383 * 120.14596 * 0.54063 * 24 23 12 26 26 C 1.37983 * 120.07640 * 0.02562 * 11 10 9 27 27 C 1.38171 * 119.96988 * 65.00096 * 4 2 1 28 28 H 0.96699 * 113.99881 * 300.00294 * 1 2 3 29 29 H 1.08996 * 109.46740 * 239.99424 * 2 1 3 30 30 H 1.48499 * 109.99920 * 299.99983 * 3 2 1 31 31 H 1.48501 * 110.00185 * 61.31767 * 3 2 1 32 32 H 1.08003 * 119.94004 * 359.97438 * 5 4 2 33 33 H 1.07991 * 119.97317 * 180.02562 * 6 5 4 34 34 H 1.08002 * 120.02665 * 180.27276 * 7 6 5 35 35 H 1.08996 * 109.47040 * 59.99719 * 10 9 8 36 36 H 1.09004 * 109.46832 * 299.99947 * 10 9 8 37 37 H 0.97001 * 120.00013 * 0.02562 * 15 13 12 38 38 H 1.08997 * 113.61668 * 203.66381 * 18 16 15 39 39 H 1.08998 * 113.61674 * 334.48890 * 18 16 15 40 40 H 0.96703 * 113.99734 * 277.42605 * 21 19 18 41 41 H 1.09002 * 113.61445 * 25.43587 * 22 16 15 42 42 H 1.09002 * 113.61408 * 156.25317 * 22 16 15 43 43 H 1.08006 * 120.07292 * 179.72371 * 23 12 11 44 44 H 1.07999 * 119.93230 * 180.27060 * 24 23 12 45 45 H 1.07996 * 119.85625 * 179.75949 * 25 24 23 46 46 H 1.08002 * 119.92469 * 359.97438 * 26 11 10 47 47 H 1.08003 * 120.03034 * 0.04000 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6383 -0.0117 2.1912 6 6 3.1001 -0.6605 3.3217 7 6 2.8518 -2.0081 3.4959 8 6 2.1473 -2.7129 2.5304 9 8 1.9062 -4.0400 2.6969 10 6 2.4124 -4.6469 3.8876 11 6 2.0505 -6.1097 3.8987 12 6 2.4383 -6.9180 4.9681 13 6 3.2057 -6.3428 6.0934 14 8 3.4998 -5.1634 6.0885 15 7 3.5784 -7.1259 7.1250 16 6 4.3393 -6.5561 8.2397 17 1 4.8871 -5.6554 7.9628 18 6 3.5193 -6.4056 9.5320 19 6 3.9668 -7.8346 9.8899 20 1 4.2145 -7.9645 10.9434 21 8 3.0910 -8.8495 9.3952 22 6 5.1928 -7.5888 8.9946 23 6 2.1039 -8.2733 4.9679 24 6 1.3836 -8.8026 3.9175 25 6 1.0021 -7.9957 2.8600 26 6 1.3349 -6.6529 2.8514 27 6 1.6844 -2.0596 1.3977 28 1 -0.3933 0.4417 0.7650 29 1 1.7922 -0.5139 -0.8899 30 1 1.5615 2.4678 -1.2085 31 1 1.5879 2.4585 1.2242 32 1 2.8303 1.0428 2.0585 33 1 3.6518 -0.1124 4.0709 34 1 3.2088 -2.5134 4.3811 35 1 1.9755 -4.1582 4.7584 36 1 3.4968 -4.5402 3.9169 37 1 3.3434 -8.0670 7.1291 38 1 3.9078 -5.6453 10.2095 39 1 2.4471 -6.3116 9.3603 40 1 2.3180 -9.0086 9.9540 41 1 5.4713 -8.4513 8.3892 42 1 6.0396 -7.1520 9.5241 43 1 2.4050 -8.9052 5.7905 44 1 1.1205 -9.8501 3.9181 45 1 0.4415 -8.4159 2.0380 46 1 1.0338 -6.0284 2.0233 47 1 1.1323 -2.6052 0.6468 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_4557126.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:49 Heat of formation + Delta-G solvation = -60.774189 kcal Electronic energy + Delta-G solvation = -30915.487661 eV Core-core repulsion = 26610.390918 eV Total energy + Delta-G solvation = -4305.096743 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.150 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.80003 -41.13635 -40.40388 -39.12476 -38.78397 -37.24273 -36.20463 -34.25181 -33.23452 -32.37158 -31.92630 -30.88215 -27.83122 -26.91377 -26.62615 -25.86998 -24.51372 -23.51913 -23.07504 -21.72750 -21.68805 -20.61750 -19.19182 -19.02389 -18.24325 -17.86205 -17.33191 -17.23478 -16.99737 -16.94428 -16.54270 -16.36631 -16.11084 -15.96941 -15.76661 -15.57833 -15.35275 -15.20618 -14.78621 -14.48211 -14.42509 -14.06571 -13.98610 -13.76867 -13.59451 -13.55123 -13.23851 -12.90895 -12.85145 -12.69095 -12.46167 -12.36801 -12.19755 -12.03315 -11.86074 -11.59804 -11.48007 -10.88791 -10.76854 -10.56011 -10.20017 -9.96726 -9.84002 -9.76469 -9.10538 -4.89619 -0.22588 0.27287 0.33961 0.53333 1.33207 1.65803 1.83278 1.99017 2.01781 2.19864 2.75444 2.79570 2.88562 3.34077 3.44528 3.52181 3.61467 3.67964 3.71479 3.75056 3.81037 3.93992 3.98097 4.02231 4.18474 4.31531 4.34317 4.37107 4.40786 4.49079 4.52318 4.54412 4.56164 4.65547 4.67935 4.72834 4.75268 4.77823 4.85487 4.89233 4.93243 5.07966 5.18280 5.33970 5.39330 5.44694 5.50313 5.52642 5.56477 5.79930 5.82881 6.42109 6.46301 6.51596 6.53270 7.15460 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.691 3.309 4 C -0.081 4.081 5 C -0.158 4.158 6 C -0.074 4.074 7 C -0.200 4.200 8 C 0.135 3.865 9 O -0.319 6.319 10 C 0.107 3.893 11 C -0.030 4.030 12 C -0.135 4.135 13 C 0.561 3.439 14 O -0.539 6.539 15 N -0.700 5.700 16 C 0.125 3.875 17 H 0.106 0.894 18 C -0.185 4.185 19 C 0.077 3.923 20 H 0.073 0.927 21 O -0.555 6.555 22 C -0.142 4.142 23 C -0.082 4.082 24 C -0.126 4.126 25 C -0.089 4.089 26 C -0.108 4.108 27 C -0.126 4.126 28 H 0.376 0.624 29 H 0.119 0.881 30 H -0.258 1.258 31 H -0.260 1.260 32 H 0.128 0.872 33 H 0.129 0.871 34 H 0.135 0.865 35 H 0.089 0.911 36 H 0.090 0.910 37 H 0.408 0.592 38 H 0.100 0.900 39 H 0.077 0.923 40 H 0.386 0.614 41 H 0.083 0.917 42 H 0.111 0.889 43 H 0.130 0.870 44 H 0.132 0.868 45 H 0.132 0.868 46 H 0.141 0.859 47 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.143 -3.428 4.239 5.858 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.185 4.185 3 Si 0.592 3.408 4 C -0.082 4.082 5 C -0.175 4.175 6 C -0.092 4.092 7 C -0.219 4.219 8 C 0.090 3.910 9 O -0.233 6.233 10 C 0.033 3.967 11 C -0.031 4.031 12 C -0.138 4.138 13 C 0.349 3.651 14 O -0.418 6.418 15 N -0.352 5.352 16 C 0.019 3.981 17 H 0.124 0.876 18 C -0.224 4.224 19 C 0.017 3.983 20 H 0.091 0.909 21 O -0.361 6.361 22 C -0.180 4.180 23 C -0.100 4.100 24 C -0.144 4.144 25 C -0.107 4.107 26 C -0.126 4.126 27 C -0.145 4.145 28 H 0.224 0.776 29 H 0.137 0.863 30 H -0.183 1.183 31 H -0.185 1.185 32 H 0.145 0.855 33 H 0.147 0.853 34 H 0.153 0.847 35 H 0.107 0.893 36 H 0.108 0.892 37 H 0.246 0.754 38 H 0.118 0.882 39 H 0.096 0.904 40 H 0.234 0.766 41 H 0.102 0.898 42 H 0.129 0.871 43 H 0.148 0.852 44 H 0.150 0.850 45 H 0.150 0.850 46 H 0.159 0.841 47 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.584 -2.236 3.105 4.617 hybrid contribution -1.495 -0.754 1.394 2.179 sum 1.089 -2.990 4.499 5.511 Atomic orbital electron populations 1.86605 1.17599 1.80019 1.49269 1.25071 0.84036 1.11103 0.98325 0.94832 0.91728 0.74239 0.79999 1.20034 0.98140 0.93617 0.96397 1.20955 1.01577 0.99847 0.95166 1.20918 0.97601 0.93704 0.96938 1.21465 1.03938 0.95919 1.00596 1.18943 0.95021 0.82658 0.94422 1.85946 1.74517 1.20189 1.42665 1.21679 0.99837 0.89335 0.85810 1.19618 0.96206 0.93857 0.93451 1.19583 1.03946 0.94491 0.95776 1.18290 0.78915 0.85994 0.81896 1.90741 1.55964 1.15743 1.79360 1.45568 1.56147 1.13572 1.19914 1.21768 0.92983 0.97616 0.85708 0.87618 1.24173 1.01867 0.98216 0.98153 1.22837 0.91318 0.87058 0.97061 0.90921 1.86343 1.38844 1.57212 1.53722 1.23461 0.96515 0.99690 0.98350 1.21265 0.96807 0.93344 0.98623 1.21189 0.98638 1.00545 0.94000 1.21474 0.97535 0.93582 0.98091 1.21073 0.97699 0.95362 0.98501 1.20234 1.03326 0.93693 0.97254 0.77635 0.86308 1.18308 1.18538 0.85494 0.85278 0.84674 0.89343 0.89222 0.75428 0.88177 0.90401 0.76589 0.89809 0.87106 0.85209 0.84994 0.85035 0.84149 0.84947 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.22 12.83 -35.23 -0.45 -1.68 16 2 C -0.08 -0.07 2.80 36.01 0.10 0.03 16 3 Si 0.69 -0.10 29.88 -169.99 -5.08 -5.18 16 4 C -0.08 -0.14 5.35 -104.64 -0.56 -0.70 16 5 C -0.16 -0.18 8.67 -39.56 -0.34 -0.52 16 6 C -0.07 -0.11 10.04 -39.60 -0.40 -0.50 16 7 C -0.20 -0.53 9.04 -39.43 -0.36 -0.89 16 8 C 0.13 0.47 6.69 -39.22 -0.26 0.21 16 9 O -0.32 -1.16 8.62 -19.43 -0.17 -1.32 16 10 C 0.11 0.33 3.38 36.00 0.12 0.45 16 11 C -0.03 -0.08 5.91 -104.23 -0.62 -0.69 16 12 C -0.13 -0.25 5.87 -104.97 -0.62 -0.87 16 13 C 0.56 1.42 7.75 -12.33 -0.10 1.32 16 14 O -0.54 -2.58 13.01 5.32 0.07 -2.51 16 15 N -0.70 -0.24 5.10 -53.96 -0.28 -0.51 16 16 C 0.12 -0.04 4.32 -67.12 -0.29 -0.33 16 17 H 0.11 0.08 7.47 -51.93 -0.39 -0.30 16 18 C -0.19 0.28 7.72 -25.82 -0.20 0.08 16 19 C 0.08 -0.18 5.29 -25.82 -0.14 -0.31 16 20 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 21 O -0.55 1.14 12.33 -35.23 -0.43 0.71 16 22 C -0.14 0.29 7.65 -25.92 -0.20 0.09 16 23 C -0.08 0.01 9.54 -39.19 -0.37 -0.36 16 24 C -0.13 0.08 10.03 -39.64 -0.40 -0.32 16 25 C -0.09 0.00 10.04 -39.49 -0.40 -0.39 16 26 C -0.11 -0.17 9.37 -39.64 -0.37 -0.54 16 27 C -0.13 -0.38 9.62 -39.43 -0.38 -0.76 16 28 H 0.38 -0.17 8.70 45.56 0.40 0.22 16 29 H 0.12 0.02 7.96 -51.93 -0.41 -0.40 16 30 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 31 H -0.26 -0.44 7.01 56.52 0.40 -0.05 16 32 H 0.13 -0.08 4.84 -52.48 -0.25 -0.33 16 33 H 0.13 -0.08 8.06 -52.49 -0.42 -0.50 16 34 H 0.14 0.31 6.30 -52.49 -0.33 -0.02 16 35 H 0.09 0.32 6.85 -51.93 -0.36 -0.04 16 36 H 0.09 0.31 6.88 -51.93 -0.36 -0.05 16 37 H 0.41 -0.35 5.64 -40.82 -0.23 -0.58 16 38 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 39 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 40 H 0.39 -2.07 9.12 45.56 0.42 -1.65 16 41 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 42 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 43 H 0.13 -0.29 6.41 -52.48 -0.34 -0.63 16 44 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 45 H 0.13 -0.27 8.06 -52.49 -0.42 -0.69 16 46 H 0.14 0.19 7.00 -52.49 -0.37 -0.18 16 47 H 0.13 0.36 8.06 -52.48 -0.42 -0.06 16 LS Contribution 385.06 15.07 5.80 5.80 Total: 0.00 -7.75 385.06 -11.53 -19.28 By element: Atomic # 1 Polarization: -4.34 SS G_CDS: -5.23 Total: -9.57 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: -5.77 Total: -5.01 kcal Atomic # 7 Polarization: -0.24 SS G_CDS: -0.28 Total: -0.51 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -0.98 Total: -4.80 kcal Atomic # 14 Polarization: -0.10 SS G_CDS: -5.08 Total: -5.18 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -7.75 -11.53 -19.28 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_4557126.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.496 kcal (2) G-P(sol) polarization free energy of solvation -7.745 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.241 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.533 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.278 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds