Wall clock time and date at job start Sun Mar 7 2021 22:02:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86294 * 109.47363 * 2 1 4 4 C 1.50707 * 109.46895 * 119.99882 * 2 1 3 5 5 C 1.38238 * 119.97430 * 245.01752 * 4 2 1 6 6 C 1.38287 * 120.11514 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05307 * 359.77399 * 6 5 4 8 8 C 1.38756 * 119.94161 * 0.50335 * 7 6 5 9 9 O 1.35900 * 120.05585 * 179.74245 * 8 7 6 10 10 C 1.42908 * 116.99740 * 359.73028 * 9 8 7 11 11 C 1.50693 * 109.47079 * 179.97438 * 10 9 8 12 12 C 1.39556 * 120.07721 * 180.02562 * 11 10 9 13 13 C 1.47851 * 120.14261 * 359.97438 * 12 11 10 14 14 O 1.21557 * 119.99710 * 0.02562 * 13 12 11 15 15 N 1.34769 * 120.00172 * 179.97438 * 13 12 11 16 16 C 1.46501 * 120.00014 * 179.97438 * 15 13 12 17 17 H 1.09001 * 112.90705 * 336.25937 * 16 15 13 18 18 C 1.53782 * 113.61142 * 107.50467 * 16 15 13 19 19 C 1.53962 * 87.11063 * 89.18830 * 18 16 15 20 20 H 1.09000 * 113.66569 * 139.88660 * 19 18 16 21 21 O 1.42894 * 113.61503 * 270.84416 * 19 18 16 22 22 C 1.53781 * 113.61619 * 205.00312 * 16 15 13 23 23 C 1.39596 * 119.71483 * 180.27346 * 12 11 10 24 24 C 1.37932 * 119.85256 * 359.46346 * 23 12 11 25 25 C 1.38383 * 120.14596 * 0.54063 * 24 23 12 26 26 C 1.37983 * 120.07640 * 0.02562 * 11 10 9 27 27 C 1.38171 * 119.96988 * 65.00096 * 4 2 1 28 28 H 0.96699 * 113.99881 * 300.00294 * 1 2 3 29 29 H 1.08996 * 109.46740 * 239.99424 * 2 1 3 30 30 H 1.48499 * 109.99920 * 299.99983 * 3 2 1 31 31 H 1.48501 * 110.00185 * 61.31767 * 3 2 1 32 32 H 1.08003 * 119.94004 * 359.97438 * 5 4 2 33 33 H 1.07991 * 119.97317 * 180.02562 * 6 5 4 34 34 H 1.08002 * 120.02665 * 180.27276 * 7 6 5 35 35 H 1.08996 * 109.47040 * 59.99719 * 10 9 8 36 36 H 1.09004 * 109.46832 * 299.99947 * 10 9 8 37 37 H 0.97001 * 120.00013 * 0.02562 * 15 13 12 38 38 H 1.08997 * 113.61668 * 203.66381 * 18 16 15 39 39 H 1.08998 * 113.61674 * 334.48890 * 18 16 15 40 40 H 0.96703 * 113.99734 * 277.42605 * 21 19 18 41 41 H 1.09002 * 113.61445 * 25.43587 * 22 16 15 42 42 H 1.09002 * 113.61408 * 156.25317 * 22 16 15 43 43 H 1.08006 * 120.07292 * 179.72371 * 23 12 11 44 44 H 1.07999 * 119.93230 * 180.27060 * 24 23 12 45 45 H 1.07996 * 119.85625 * 179.75949 * 25 24 23 46 46 H 1.08002 * 119.92469 * 359.97438 * 26 11 10 47 47 H 1.08003 * 120.03034 * 0.04000 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6383 -0.0117 2.1912 6 6 3.1001 -0.6605 3.3217 7 6 2.8518 -2.0081 3.4959 8 6 2.1473 -2.7129 2.5304 9 8 1.9062 -4.0400 2.6969 10 6 2.4124 -4.6469 3.8876 11 6 2.0505 -6.1097 3.8987 12 6 2.4383 -6.9180 4.9681 13 6 3.2057 -6.3428 6.0934 14 8 3.4998 -5.1634 6.0885 15 7 3.5784 -7.1259 7.1250 16 6 4.3393 -6.5561 8.2397 17 1 4.8871 -5.6554 7.9628 18 6 3.5193 -6.4056 9.5320 19 6 3.9668 -7.8346 9.8899 20 1 4.2145 -7.9645 10.9434 21 8 3.0910 -8.8495 9.3952 22 6 5.1928 -7.5888 8.9946 23 6 2.1039 -8.2733 4.9679 24 6 1.3836 -8.8026 3.9175 25 6 1.0021 -7.9957 2.8600 26 6 1.3349 -6.6529 2.8514 27 6 1.6844 -2.0596 1.3977 28 1 -0.3933 0.4417 0.7650 29 1 1.7922 -0.5139 -0.8899 30 1 1.5615 2.4678 -1.2085 31 1 1.5879 2.4585 1.2242 32 1 2.8303 1.0428 2.0585 33 1 3.6518 -0.1124 4.0709 34 1 3.2088 -2.5134 4.3811 35 1 1.9755 -4.1582 4.7584 36 1 3.4968 -4.5402 3.9169 37 1 3.3434 -8.0670 7.1291 38 1 3.9078 -5.6453 10.2095 39 1 2.4471 -6.3116 9.3603 40 1 2.3180 -9.0086 9.9540 41 1 5.4713 -8.4513 8.3892 42 1 6.0396 -7.1520 9.5241 43 1 2.4050 -8.9052 5.7905 44 1 1.1205 -9.8501 3.9181 45 1 0.4415 -8.4159 2.0380 46 1 1.0338 -6.0284 2.0233 47 1 1.1323 -2.6052 0.6468 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_4557126.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:48 Heat of formation + Delta-G solvation = -59.796862 kcal Electronic energy + Delta-G solvation = -30915.445281 eV Core-core repulsion = 26610.390918 eV Total energy + Delta-G solvation = -4305.054363 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.150 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.89376 -41.26745 -40.38503 -39.25233 -38.89460 -37.39450 -36.10578 -34.28742 -33.33055 -32.52910 -31.95571 -31.03451 -27.97548 -26.77785 -26.73415 -25.86864 -24.52542 -23.67183 -23.15121 -21.84512 -21.76698 -20.56428 -19.20819 -19.18524 -18.14193 -17.98266 -17.42590 -17.31594 -17.21791 -17.08132 -16.54840 -16.36655 -16.22751 -16.05009 -15.81676 -15.62277 -15.46494 -15.11185 -14.89438 -14.60245 -14.47293 -14.14936 -14.13957 -13.74722 -13.60035 -13.53055 -13.34395 -13.03592 -12.87548 -12.66578 -12.48918 -12.36252 -12.23383 -12.19889 -12.01395 -11.61142 -11.46537 -10.97288 -10.69207 -10.66950 -10.28147 -10.01026 -9.98488 -9.84024 -9.30708 -4.90685 -0.29883 0.16129 0.23305 0.35600 1.28733 1.61427 1.71527 1.90215 1.97835 2.03193 2.61998 2.69828 3.11221 3.38289 3.47276 3.50889 3.53638 3.63923 3.76233 3.78438 3.81433 3.85382 4.01409 4.07522 4.14112 4.16492 4.20385 4.22086 4.32500 4.37453 4.44059 4.52326 4.64014 4.66101 4.71395 4.74141 4.81169 4.83740 4.90126 4.93868 4.96840 5.02072 5.16665 5.22133 5.31727 5.35081 5.40177 5.41469 5.51498 5.68833 5.79594 6.29885 6.41409 6.45600 6.83812 7.05444 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.088 4.088 3 Si 0.779 3.221 4 C -0.080 4.080 5 C -0.156 4.156 6 C -0.074 4.074 7 C -0.210 4.210 8 C 0.116 3.884 9 O -0.327 6.327 10 C 0.119 3.881 11 C -0.052 4.052 12 C -0.149 4.149 13 C 0.554 3.446 14 O -0.571 6.571 15 N -0.689 5.689 16 C 0.110 3.890 17 H 0.088 0.912 18 C -0.181 4.181 19 C 0.083 3.917 20 H 0.090 0.910 21 O -0.568 6.568 22 C -0.136 4.136 23 C -0.078 4.078 24 C -0.123 4.123 25 C -0.088 4.088 26 C -0.122 4.122 27 C -0.140 4.140 28 H 0.386 0.614 29 H 0.125 0.875 30 H -0.301 1.301 31 H -0.279 1.279 32 H 0.149 0.851 33 H 0.152 0.848 34 H 0.131 0.869 35 H 0.075 0.925 36 H 0.078 0.922 37 H 0.415 0.585 38 H 0.110 0.890 39 H 0.064 0.936 40 H 0.399 0.601 41 H 0.079 0.921 42 H 0.127 0.873 43 H 0.152 0.848 44 H 0.162 0.838 45 H 0.154 0.846 46 H 0.135 0.865 47 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.388 -4.373 4.982 7.046 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.196 4.196 3 Si 0.683 3.317 4 C -0.081 4.081 5 C -0.174 4.174 6 C -0.092 4.092 7 C -0.229 4.229 8 C 0.071 3.929 9 O -0.241 6.241 10 C 0.045 3.955 11 C -0.053 4.053 12 C -0.152 4.152 13 C 0.343 3.657 14 O -0.453 6.453 15 N -0.341 5.341 16 C 0.004 3.996 17 H 0.106 0.894 18 C -0.220 4.220 19 C 0.024 3.976 20 H 0.107 0.893 21 O -0.376 6.376 22 C -0.174 4.174 23 C -0.097 4.097 24 C -0.140 4.140 25 C -0.106 4.106 26 C -0.140 4.140 27 C -0.159 4.159 28 H 0.235 0.765 29 H 0.143 0.857 30 H -0.229 1.229 31 H -0.205 1.205 32 H 0.166 0.834 33 H 0.170 0.830 34 H 0.149 0.851 35 H 0.093 0.907 36 H 0.096 0.904 37 H 0.254 0.746 38 H 0.128 0.872 39 H 0.083 0.917 40 H 0.250 0.750 41 H 0.097 0.903 42 H 0.145 0.855 43 H 0.170 0.830 44 H 0.179 0.821 45 H 0.172 0.828 46 H 0.153 0.847 47 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 2.825 -3.230 3.881 5.786 hybrid contribution -1.615 -0.482 1.146 2.038 sum 1.210 -3.712 5.027 6.366 Atomic orbital electron populations 1.86573 1.18436 1.80520 1.50084 1.25380 0.83528 1.12489 0.98192 0.93823 0.90243 0.71170 0.76461 1.20169 0.97905 0.93126 0.96870 1.21205 1.00788 1.00793 0.94604 1.21223 0.97247 0.93193 0.97553 1.21547 1.04237 0.96705 1.00422 1.19170 0.95870 0.82745 0.95097 1.85931 1.74750 1.20553 1.42912 1.21479 0.98904 0.90002 0.85127 1.19706 0.97505 0.93551 0.94514 1.19660 1.04561 0.95476 0.95475 1.18517 0.78877 0.85800 0.82492 1.90718 1.57384 1.17078 1.80092 1.45520 1.55434 1.13636 1.19484 1.21941 0.93820 0.97844 0.85986 0.89359 1.24171 1.00818 0.99513 0.97532 1.22814 0.90826 0.86236 0.97749 0.89257 1.86305 1.39627 1.57094 1.54620 1.23493 0.97043 0.98797 0.98052 1.21546 0.96144 0.92522 0.99447 1.21561 0.97510 1.01819 0.93129 1.21778 0.97041 0.92788 0.98965 1.21138 0.98207 0.96392 0.98223 1.20333 1.03895 0.94448 0.97187 0.76462 0.85747 1.22901 1.20541 0.83350 0.83019 0.85093 0.90700 0.90439 0.74641 0.87188 0.91686 0.74977 0.90281 0.85473 0.83029 0.82088 0.82816 0.84709 0.85383 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.87 12.83 -148.98 -1.91 -4.78 16 2 C -0.09 -0.18 2.80 71.24 0.20 0.02 16 3 Si 0.78 -0.57 29.88 68.60 2.05 1.48 16 4 C -0.08 -0.33 5.35 -19.88 -0.11 -0.44 16 5 C -0.16 -0.32 8.67 22.28 0.19 -0.13 16 6 C -0.07 -0.24 10.04 22.25 0.22 -0.02 16 7 C -0.21 -1.54 9.04 22.37 0.20 -1.33 16 8 C 0.12 1.10 6.69 22.51 0.15 1.25 16 9 O -0.33 -3.40 8.62 -92.42 -0.80 -4.19 16 10 C 0.12 1.13 3.38 71.23 0.24 1.37 16 11 C -0.05 -0.39 5.91 -19.61 -0.12 -0.50 16 12 C -0.15 -0.77 5.87 -20.09 -0.12 -0.89 16 13 C 0.55 3.93 7.75 86.79 0.67 4.60 16 14 O -0.57 -7.24 13.01 -3.89 -0.05 -7.29 16 15 N -0.69 -1.18 5.10 -442.90 -2.26 -3.44 16 16 C 0.11 0.03 4.32 45.52 0.20 0.23 16 17 H 0.09 0.33 7.47 -2.39 -0.02 0.31 16 18 C -0.18 0.50 7.72 31.18 0.24 0.74 16 19 C 0.08 -0.45 5.29 31.18 0.16 -0.28 16 20 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 21 O -0.57 2.84 12.33 -148.98 -1.84 1.00 16 22 C -0.14 0.59 7.65 31.12 0.24 0.83 16 23 C -0.08 0.05 9.54 22.53 0.21 0.26 16 24 C -0.12 0.30 10.03 22.23 0.22 0.52 16 25 C -0.09 0.03 10.04 22.33 0.22 0.26 16 26 C -0.12 -0.57 9.37 22.23 0.21 -0.36 16 27 C -0.14 -1.09 9.62 22.37 0.22 -0.87 16 28 H 0.39 -0.16 8.70 -74.06 -0.64 -0.80 16 29 H 0.12 0.07 7.96 -2.39 -0.02 0.06 16 30 H -0.30 -1.98 7.11 99.48 0.71 -1.27 16 31 H -0.28 -0.68 7.01 99.48 0.70 0.02 16 32 H 0.15 -0.39 4.84 -2.91 -0.01 -0.41 16 33 H 0.15 -0.27 8.06 -2.92 -0.02 -0.30 16 34 H 0.13 1.00 6.30 -2.91 -0.02 0.98 16 35 H 0.08 0.84 6.85 -2.39 -0.02 0.83 16 36 H 0.08 0.85 6.88 -2.38 -0.02 0.83 16 37 H 0.41 -0.65 5.64 -92.71 -0.52 -1.17 16 38 H 0.11 -0.55 8.14 -2.39 -0.02 -0.56 16 39 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 40 H 0.40 -4.67 9.12 -74.06 -0.68 -5.35 16 41 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 42 H 0.13 -1.00 8.14 -2.39 -0.02 -1.02 16 43 H 0.15 -0.86 6.41 -2.91 -0.02 -0.88 16 44 H 0.16 -1.34 8.06 -2.91 -0.02 -1.36 16 45 H 0.15 -0.81 8.06 -2.91 -0.02 -0.84 16 46 H 0.14 0.68 7.00 -2.91 -0.02 0.66 16 47 H 0.13 1.00 8.06 -2.91 -0.02 0.98 16 Total: 0.00 -20.20 385.06 -2.11 -22.31 By element: Atomic # 1 Polarization: -9.57 SS G_CDS: -0.77 Total: -10.34 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: 3.47 Total: 5.25 kcal Atomic # 7 Polarization: -1.18 SS G_CDS: -2.26 Total: -3.44 kcal Atomic # 8 Polarization: -10.67 SS G_CDS: -4.60 Total: -15.26 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: 2.05 Total: 1.48 kcal Total: -20.20 -2.11 -22.31 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_4557126.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.483 kcal (2) G-P(sol) polarization free energy of solvation -20.205 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.109 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.314 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.797 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds