Wall clock time and date at job start Sun Mar 7 2021 22:02:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.47306 * 2 1 4 4 C 1.50705 * 109.47049 * 119.99982 * 2 1 3 5 5 C 1.38238 * 119.97186 * 244.97731 * 4 2 1 6 6 C 1.38290 * 120.11470 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05353 * 359.76575 * 6 5 4 8 8 C 1.38760 * 119.94060 * 0.51347 * 7 6 5 9 9 O 1.35903 * 120.05252 * 179.74402 * 8 7 6 10 10 C 1.42900 * 117.00134 * 359.71988 * 9 8 7 11 11 C 1.50703 * 109.46859 * 180.02562 * 10 9 8 12 12 O 1.21277 * 119.99948 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99369 * 180.02562 * 11 10 9 14 14 C 1.46496 * 119.99390 * 180.02562 * 13 11 10 15 15 H 1.09000 * 112.91246 * 23.74616 * 14 13 11 16 16 C 1.53786 * 113.61518 * 154.99856 * 14 13 11 17 17 C 1.53781 * 87.17350 * 89.15486 * 16 14 13 18 18 H 1.09001 * 113.61695 * 139.93969 * 17 16 14 19 19 O 1.42902 * 113.61735 * 270.76044 * 17 16 14 20 20 C 1.53782 * 87.08260 * 25.39213 * 17 16 14 21 21 C 1.38168 * 119.97241 * 64.99738 * 4 2 1 22 22 H 0.96698 * 113.99526 * 60.00115 * 1 2 3 23 23 H 1.08994 * 109.47165 * 239.99609 * 2 1 3 24 24 H 1.48507 * 110.00234 * 59.99990 * 3 2 1 25 25 H 1.48506 * 110.00216 * 181.31699 * 3 2 1 26 26 H 1.08001 * 119.94452 * 0.02562 * 5 4 2 27 27 H 1.08001 * 119.97617 * 180.02562 * 6 5 4 28 28 H 1.07998 * 120.03039 * 180.27809 * 7 6 5 29 29 H 1.09002 * 109.47129 * 60.00151 * 10 9 8 30 30 H 1.09002 * 109.46992 * 300.00256 * 10 9 8 31 31 H 0.97001 * 120.00492 * 359.97438 * 13 11 10 32 32 H 1.09002 * 113.61357 * 334.56403 * 16 14 13 33 33 H 1.09002 * 113.61608 * 203.74565 * 16 14 13 34 34 H 0.96694 * 114.00074 * 180.02562 * 19 17 16 35 35 H 1.08997 * 113.61668 * 89.11298 * 20 17 16 36 36 H 1.08994 * 113.61387 * 220.02033 * 20 17 16 37 37 H 1.07998 * 120.02951 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6391 -0.0118 2.1907 6 6 3.1010 -0.6607 3.3213 7 6 2.8518 -2.0080 3.4960 8 6 2.1467 -2.7127 2.5308 9 8 1.9047 -4.0396 2.6979 10 6 2.4110 -4.6464 3.8885 11 6 2.0491 -6.1093 3.8995 12 8 1.4201 -6.5854 2.9783 13 7 2.4246 -6.8885 4.9332 14 6 2.0733 -8.3107 4.9436 15 1 1.8944 -8.7110 3.9457 16 6 3.0222 -9.1734 5.7923 17 6 2.0962 -8.8832 6.9853 18 1 1.9356 -9.7449 7.6332 19 8 2.4481 -7.7026 7.7093 20 6 0.9718 -8.6664 5.9588 21 6 1.6845 -2.0595 1.3978 22 1 -0.3932 0.4417 -0.7651 23 1 1.7923 -0.5139 -0.8899 24 1 1.5616 2.4679 1.2085 25 1 3.5347 1.7702 -0.0321 26 1 2.8310 1.0427 2.0582 27 1 3.6533 -0.1126 4.0702 28 1 3.2088 -2.5133 4.3811 29 1 1.9748 -4.1573 4.7594 30 1 3.4955 -4.5405 3.9174 31 1 2.9280 -6.5078 5.6698 32 1 4.0199 -8.7480 5.9005 33 1 3.0392 -10.2228 5.4979 34 1 1.8696 -7.5150 8.4610 35 1 0.4271 -9.5768 5.7089 36 1 0.3142 -7.8316 6.2013 37 1 1.1314 -2.6049 0.6474 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_4860298.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:53 Heat of formation + Delta-G solvation = -85.632721 kcal Electronic energy + Delta-G solvation = -21258.223790 eV Core-core repulsion = 17776.028900 eV Total energy + Delta-G solvation = -3482.194890 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -41.63689 -41.06786 -39.73614 -38.68570 -37.24455 -36.15692 -34.01145 -32.59555 -31.65485 -29.35292 -26.91373 -26.79359 -25.37261 -23.68159 -22.63887 -21.53426 -20.69829 -19.21224 -18.69744 -18.39438 -17.93784 -17.54118 -17.40974 -17.07287 -16.70829 -16.23325 -15.83420 -15.50927 -15.45765 -15.09074 -14.68203 -14.54092 -14.22401 -13.86654 -13.75632 -13.71468 -13.48525 -13.18093 -12.80090 -12.46050 -12.33493 -12.17862 -12.06359 -11.77493 -11.60441 -10.91883 -10.82544 -10.35861 -10.10987 -9.89853 -9.26506 -4.95809 0.19617 0.39392 1.25621 1.46851 1.50458 1.65606 1.98288 2.53396 2.63530 2.89111 3.34196 3.39371 3.46462 3.62653 3.69518 3.77593 3.81240 3.90027 3.93443 3.98244 3.98833 4.19766 4.24177 4.50635 4.52988 4.55690 4.61039 4.68821 4.74132 4.85618 4.88440 4.96538 5.21536 5.32916 5.43348 5.47834 5.63427 6.27246 6.41338 6.50618 6.64075 7.14403 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.075 4.075 3 Si 0.689 3.311 4 C -0.035 4.035 5 C -0.161 4.161 6 C -0.071 4.071 7 C -0.206 4.206 8 C 0.131 3.869 9 O -0.287 6.287 10 C 0.041 3.959 11 C 0.517 3.483 12 O -0.514 6.514 13 N -0.704 5.704 14 C 0.126 3.874 15 H 0.106 0.894 16 C -0.141 4.141 17 C 0.077 3.923 18 H 0.073 0.927 19 O -0.555 6.555 20 C -0.185 4.185 21 C -0.117 4.117 22 H 0.383 0.617 23 H 0.077 0.923 24 H -0.250 1.250 25 H -0.255 1.255 26 H 0.121 0.879 27 H 0.131 0.869 28 H 0.132 0.868 29 H 0.095 0.905 30 H 0.095 0.905 31 H 0.409 0.591 32 H 0.084 0.916 33 H 0.111 0.889 34 H 0.386 0.614 35 H 0.101 0.899 36 H 0.078 0.922 37 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.639 0.431 2.462 2.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.185 4.185 3 Si 0.590 3.410 4 C -0.035 4.035 5 C -0.178 4.178 6 C -0.089 4.089 7 C -0.225 4.225 8 C 0.086 3.914 9 O -0.199 6.199 10 C -0.038 4.038 11 C 0.302 3.698 12 O -0.388 6.388 13 N -0.358 5.358 14 C 0.020 3.980 15 H 0.124 0.876 16 C -0.179 4.179 17 C 0.017 3.983 18 H 0.091 0.909 19 O -0.361 6.361 20 C -0.224 4.224 21 C -0.136 4.136 22 H 0.231 0.769 23 H 0.095 0.905 24 H -0.175 1.175 25 H -0.179 1.179 26 H 0.138 0.862 27 H 0.149 0.851 28 H 0.150 0.850 29 H 0.113 0.887 30 H 0.113 0.887 31 H 0.245 0.755 32 H 0.102 0.898 33 H 0.129 0.871 34 H 0.234 0.766 35 H 0.119 0.881 36 H 0.096 0.904 37 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 2.120 0.259 2.180 3.052 hybrid contribution -0.020 -0.394 1.307 1.365 sum 2.100 -0.135 3.486 4.072 Atomic orbital electron populations 1.86508 1.16963 1.81872 1.49674 1.24746 0.85952 1.10565 0.97249 0.95310 0.80677 0.77824 0.87208 1.19127 0.96770 0.92909 0.94706 1.20821 1.02429 0.99211 0.95385 1.20855 0.97607 0.93731 0.96739 1.21291 1.04851 0.95909 1.00415 1.19016 0.95205 0.82496 0.94693 1.86168 1.73727 1.19948 1.40102 1.22455 1.00693 0.91896 0.88720 1.20030 0.79810 0.87468 0.82488 1.90777 1.38150 1.74630 1.35250 1.45474 1.57993 1.09114 1.23211 1.21805 0.95501 0.80561 1.00090 0.87603 1.23459 0.99225 1.01190 0.94037 1.22801 0.95374 0.87782 0.92302 0.90918 1.86342 1.58262 1.44494 1.47044 1.24180 0.97617 1.03180 0.97447 1.20252 1.02452 0.93551 0.97347 0.76919 0.90513 1.17507 1.17944 0.86188 0.85094 0.85025 0.88705 0.88714 0.75472 0.89767 0.87057 0.76589 0.88080 0.90361 0.84431 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.66 12.81 -35.23 -0.45 -1.11 16 2 C -0.07 -0.07 2.79 36.01 0.10 0.03 16 3 Si 0.69 -0.42 29.85 -169.99 -5.07 -5.50 16 4 C -0.03 -0.12 5.38 -104.65 -0.56 -0.68 16 5 C -0.16 -0.48 8.67 -39.56 -0.34 -0.82 16 6 C -0.07 -0.12 10.04 -39.60 -0.40 -0.52 16 7 C -0.21 -0.34 9.04 -39.43 -0.36 -0.70 16 8 C 0.13 0.50 6.69 -39.22 -0.26 0.24 16 9 O -0.29 -1.30 9.67 -39.35 -0.38 -1.68 16 10 C 0.04 0.03 5.22 36.01 0.19 0.22 16 11 C 0.52 1.49 7.91 -10.98 -0.09 1.41 16 12 O -0.51 -3.92 16.10 -14.35 -0.23 -4.15 16 13 N -0.70 -0.11 5.16 -52.92 -0.27 -0.38 16 14 C 0.13 0.01 4.33 -67.02 -0.29 -0.29 16 15 H 0.11 0.17 7.47 -51.93 -0.39 -0.22 16 16 C -0.14 0.27 7.65 -25.92 -0.20 0.07 16 17 C 0.08 -0.17 5.27 -25.92 -0.14 -0.30 16 18 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 19 O -0.56 1.15 12.34 -35.23 -0.43 0.71 16 20 C -0.19 0.23 7.72 -25.82 -0.20 0.03 16 21 C -0.12 -0.50 9.62 -39.43 -0.38 -0.88 16 22 H 0.38 -1.55 8.74 45.56 0.40 -1.16 16 23 H 0.08 -0.05 7.96 -51.93 -0.41 -0.47 16 24 H -0.25 -0.60 7.05 56.52 0.40 -0.20 16 25 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 26 H 0.12 0.26 4.86 -52.49 -0.26 0.01 16 27 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 28 H 0.13 -0.16 6.30 -52.49 -0.33 -0.49 16 29 H 0.10 -0.16 7.65 -51.93 -0.40 -0.55 16 30 H 0.10 -0.18 7.67 -51.93 -0.40 -0.57 16 31 H 0.41 -0.69 7.61 -40.82 -0.31 -1.01 16 32 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 34 H 0.39 -2.08 9.12 45.56 0.42 -1.66 16 35 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 37 H 0.14 0.57 8.06 -52.49 -0.42 0.15 16 LS Contribution 314.61 15.07 4.74 4.74 Total: 0.00 -10.51 314.61 -8.87 -19.38 By element: Atomic # 1 Polarization: -5.97 SS G_CDS: -3.84 Total: -9.81 kcal Atomic # 6 Polarization: 0.72 SS G_CDS: -2.92 Total: -2.21 kcal Atomic # 7 Polarization: -0.11 SS G_CDS: -0.27 Total: -0.38 kcal Atomic # 8 Polarization: -4.73 SS G_CDS: -1.50 Total: -6.22 kcal Atomic # 14 Polarization: -0.42 SS G_CDS: -5.07 Total: -5.50 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -10.51 -8.87 -19.38 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_4860298.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.251 kcal (2) G-P(sol) polarization free energy of solvation -10.514 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.765 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.867 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.381 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.633 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds