Wall clock time and date at job start Sun Mar 7 2021 22:02:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.47306 * 2 1 4 4 C 1.50705 * 109.47049 * 119.99982 * 2 1 3 5 5 C 1.38238 * 119.97186 * 244.97731 * 4 2 1 6 6 C 1.38290 * 120.11470 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05353 * 359.76575 * 6 5 4 8 8 C 1.38760 * 119.94060 * 0.51347 * 7 6 5 9 9 O 1.35903 * 120.05252 * 179.74402 * 8 7 6 10 10 C 1.42900 * 117.00134 * 359.71988 * 9 8 7 11 11 C 1.50703 * 109.46859 * 180.02562 * 10 9 8 12 12 O 1.21277 * 119.99948 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99369 * 180.02562 * 11 10 9 14 14 C 1.46496 * 119.99390 * 180.02562 * 13 11 10 15 15 H 1.09000 * 112.91246 * 23.74616 * 14 13 11 16 16 C 1.53786 * 113.61518 * 154.99856 * 14 13 11 17 17 C 1.53781 * 87.17350 * 89.15486 * 16 14 13 18 18 H 1.09001 * 113.61695 * 139.93969 * 17 16 14 19 19 O 1.42902 * 113.61735 * 270.76044 * 17 16 14 20 20 C 1.53782 * 87.08260 * 25.39213 * 17 16 14 21 21 C 1.38168 * 119.97241 * 64.99738 * 4 2 1 22 22 H 0.96698 * 113.99526 * 60.00115 * 1 2 3 23 23 H 1.08994 * 109.47165 * 239.99609 * 2 1 3 24 24 H 1.48507 * 110.00234 * 59.99990 * 3 2 1 25 25 H 1.48506 * 110.00216 * 181.31699 * 3 2 1 26 26 H 1.08001 * 119.94452 * 0.02562 * 5 4 2 27 27 H 1.08001 * 119.97617 * 180.02562 * 6 5 4 28 28 H 1.07998 * 120.03039 * 180.27809 * 7 6 5 29 29 H 1.09002 * 109.47129 * 60.00151 * 10 9 8 30 30 H 1.09002 * 109.46992 * 300.00256 * 10 9 8 31 31 H 0.97001 * 120.00492 * 359.97438 * 13 11 10 32 32 H 1.09002 * 113.61357 * 334.56403 * 16 14 13 33 33 H 1.09002 * 113.61608 * 203.74565 * 16 14 13 34 34 H 0.96694 * 114.00074 * 180.02562 * 19 17 16 35 35 H 1.08997 * 113.61668 * 89.11298 * 20 17 16 36 36 H 1.08994 * 113.61387 * 220.02033 * 20 17 16 37 37 H 1.07998 * 120.02951 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6391 -0.0118 2.1907 6 6 3.1010 -0.6607 3.3213 7 6 2.8518 -2.0080 3.4960 8 6 2.1467 -2.7127 2.5308 9 8 1.9047 -4.0396 2.6979 10 6 2.4110 -4.6464 3.8885 11 6 2.0491 -6.1093 3.8995 12 8 1.4201 -6.5854 2.9783 13 7 2.4246 -6.8885 4.9332 14 6 2.0733 -8.3107 4.9436 15 1 1.8944 -8.7110 3.9457 16 6 3.0222 -9.1734 5.7923 17 6 2.0962 -8.8832 6.9853 18 1 1.9356 -9.7449 7.6332 19 8 2.4481 -7.7026 7.7093 20 6 0.9718 -8.6664 5.9588 21 6 1.6845 -2.0595 1.3978 22 1 -0.3932 0.4417 -0.7651 23 1 1.7923 -0.5139 -0.8899 24 1 1.5616 2.4679 1.2085 25 1 3.5347 1.7702 -0.0321 26 1 2.8310 1.0427 2.0582 27 1 3.6533 -0.1126 4.0702 28 1 3.2088 -2.5133 4.3811 29 1 1.9748 -4.1573 4.7594 30 1 3.4955 -4.5405 3.9174 31 1 2.9280 -6.5078 5.6698 32 1 4.0199 -8.7480 5.9005 33 1 3.0392 -10.2228 5.4979 34 1 1.8696 -7.5150 8.4610 35 1 0.4271 -9.5768 5.7089 36 1 0.3142 -7.8316 6.2013 37 1 1.1314 -2.6049 0.6474 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_4860298.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:52 Heat of formation + Delta-G solvation = -90.567651 kcal Electronic energy + Delta-G solvation = -21258.437785 eV Core-core repulsion = 17776.028900 eV Total energy + Delta-G solvation = -3482.408885 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.77024 -41.13381 -39.81537 -38.84142 -37.32048 -36.07833 -34.10062 -32.71624 -31.79682 -29.45337 -26.88168 -26.79297 -25.31951 -23.84419 -22.75040 -21.66150 -20.65425 -19.32325 -18.67734 -18.43607 -17.92013 -17.69070 -17.52935 -17.21693 -16.73626 -16.20402 -15.90787 -15.68951 -15.46262 -15.10398 -14.77679 -14.65098 -14.36957 -13.88724 -13.85043 -13.62452 -13.54443 -13.26585 -12.71954 -12.46242 -12.36623 -12.30045 -12.18597 -11.87025 -11.49709 -11.12735 -10.71879 -10.40485 -10.19818 -10.03043 -9.45691 -4.92985 0.04434 0.20159 1.24011 1.31657 1.39781 1.65939 1.96212 2.45558 2.49210 3.09142 3.36807 3.42624 3.45615 3.66184 3.74248 3.77940 3.81499 3.83837 3.91642 3.97671 4.11716 4.13283 4.16773 4.36671 4.54172 4.66289 4.69808 4.78815 4.82423 4.83241 4.94523 4.99712 5.05556 5.16627 5.27023 5.44926 5.51698 6.13946 6.37941 6.83041 6.87344 7.03304 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.091 4.091 3 Si 0.790 3.210 4 C -0.051 4.051 5 C -0.180 4.180 6 C -0.071 4.071 7 C -0.202 4.202 8 C 0.119 3.881 9 O -0.317 6.317 10 C 0.038 3.962 11 C 0.513 3.487 12 O -0.573 6.573 13 N -0.687 5.687 14 C 0.108 3.892 15 H 0.083 0.917 16 C -0.134 4.134 17 C 0.085 3.915 18 H 0.090 0.910 19 O -0.567 6.567 20 C -0.183 4.183 21 C -0.144 4.144 22 H 0.404 0.596 23 H 0.090 0.910 24 H -0.291 1.291 25 H -0.285 1.285 26 H 0.124 0.876 27 H 0.160 0.840 28 H 0.165 0.835 29 H 0.123 0.877 30 H 0.125 0.875 31 H 0.420 0.580 32 H 0.082 0.918 33 H 0.126 0.874 34 H 0.400 0.600 35 H 0.108 0.892 36 H 0.066 0.934 37 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.557 0.767 3.957 4.774 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.200 4.200 3 Si 0.694 3.306 4 C -0.051 4.051 5 C -0.197 4.197 6 C -0.089 4.089 7 C -0.221 4.221 8 C 0.074 3.926 9 O -0.231 6.231 10 C -0.039 4.039 11 C 0.299 3.701 12 O -0.452 6.452 13 N -0.341 5.341 14 C 0.002 3.998 15 H 0.101 0.899 16 C -0.172 4.172 17 C 0.026 3.974 18 H 0.107 0.893 19 O -0.376 6.376 20 C -0.222 4.222 21 C -0.163 4.163 22 H 0.255 0.745 23 H 0.108 0.892 24 H -0.219 1.219 25 H -0.212 1.212 26 H 0.141 0.859 27 H 0.177 0.823 28 H 0.182 0.818 29 H 0.141 0.859 30 H 0.143 0.857 31 H 0.259 0.741 32 H 0.101 0.899 33 H 0.144 0.856 34 H 0.251 0.749 35 H 0.127 0.873 36 H 0.085 0.915 37 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 3.035 0.582 3.698 4.819 hybrid contribution -0.309 -0.530 0.900 1.090 sum 2.726 0.051 4.598 5.346 Atomic orbital electron populations 1.86454 1.17208 1.82564 1.51325 1.25064 0.86005 1.12088 0.96831 0.94213 0.77256 0.74466 0.84645 1.19499 0.96898 0.92851 0.95892 1.21058 1.02996 0.99579 0.96100 1.21252 0.96952 0.93964 0.96727 1.21614 1.03793 0.95902 1.00758 1.19199 0.95780 0.82443 0.95192 1.86125 1.74479 1.20489 1.41958 1.22712 1.02560 0.90184 0.88481 1.20522 0.78919 0.88548 0.82065 1.90748 1.41085 1.75837 1.37503 1.45404 1.56944 1.09086 1.22668 1.21982 0.97496 0.80712 0.99576 0.89929 1.23481 0.98638 1.01530 0.93518 1.22752 0.94140 0.88314 0.92237 0.89257 1.86302 1.58908 1.44565 1.47779 1.24186 0.97492 1.03064 0.97430 1.20352 1.03699 0.94244 0.97998 0.74485 0.89236 1.21917 1.21221 0.85885 0.82284 0.81788 0.85921 0.85714 0.74105 0.89947 0.85577 0.74918 0.87319 0.91479 0.85735 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.86 12.81 -148.98 -1.91 -3.76 16 2 C -0.09 -0.24 2.79 71.24 0.20 -0.04 16 3 Si 0.79 -0.82 29.85 68.60 2.05 1.23 16 4 C -0.05 -0.42 5.38 -19.88 -0.11 -0.53 16 5 C -0.18 -1.14 8.67 22.28 0.19 -0.95 16 6 C -0.07 -0.19 10.04 22.26 0.22 0.04 16 7 C -0.20 -0.50 9.04 22.37 0.20 -0.30 16 8 C 0.12 1.02 6.69 22.51 0.15 1.17 16 9 O -0.32 -3.29 9.67 -73.42 -0.71 -4.00 16 10 C 0.04 0.05 5.22 71.24 0.37 0.42 16 11 C 0.51 3.55 7.91 87.66 0.69 4.24 16 12 O -0.57 -10.30 16.10 16.02 0.26 -10.04 16 13 N -0.69 -0.46 5.16 -439.74 -2.27 -2.73 16 14 C 0.11 0.10 4.33 45.58 0.20 0.29 16 15 H 0.08 0.46 7.47 -2.39 -0.02 0.44 16 16 C -0.13 0.58 7.65 31.12 0.24 0.82 16 17 C 0.08 -0.46 5.27 31.12 0.16 -0.30 16 18 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 19 O -0.57 3.11 12.34 -148.98 -1.84 1.27 16 20 C -0.18 0.41 7.72 31.18 0.24 0.66 16 21 C -0.14 -1.53 9.62 22.37 0.22 -1.32 16 22 H 0.40 -3.19 8.74 -74.06 -0.65 -3.84 16 23 H 0.09 -0.06 7.96 -2.39 -0.02 -0.08 16 24 H -0.29 -1.64 7.05 99.48 0.70 -0.94 16 25 H -0.29 -1.08 7.11 99.48 0.71 -0.38 16 26 H 0.12 0.60 4.86 -2.91 -0.01 0.58 16 27 H 0.16 -0.58 8.06 -2.91 -0.02 -0.61 16 28 H 0.16 -0.83 6.30 -2.91 -0.02 -0.85 16 29 H 0.12 -0.58 7.65 -2.39 -0.02 -0.60 16 30 H 0.13 -0.65 7.67 -2.39 -0.02 -0.67 16 31 H 0.42 -1.73 7.61 -92.71 -0.71 -2.44 16 32 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 33 H 0.13 -0.94 8.14 -2.39 -0.02 -0.96 16 34 H 0.40 -4.88 9.12 -74.06 -0.68 -5.55 16 35 H 0.11 -0.44 8.14 -2.39 -0.02 -0.46 16 36 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 37 H 0.12 1.46 8.06 -2.91 -0.02 1.44 16 Total: 0.00 -27.53 314.61 -2.31 -29.83 By element: Atomic # 1 Polarization: -15.12 SS G_CDS: -0.87 Total: -15.99 kcal Atomic # 6 Polarization: 1.22 SS G_CDS: 2.98 Total: 4.20 kcal Atomic # 7 Polarization: -0.46 SS G_CDS: -2.27 Total: -2.73 kcal Atomic # 8 Polarization: -12.34 SS G_CDS: -4.20 Total: -16.54 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: 2.05 Total: 1.23 kcal Total: -27.53 -2.31 -29.83 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_4860298.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.734 kcal (2) G-P(sol) polarization free energy of solvation -27.527 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.261 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.307 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.834 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.568 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds