Wall clock time and date at job start Sun Mar 7 2021 22:02:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35991 * 116.99635 * 2 1 4 4 C 1.38671 * 119.99612 * 180.02562 * 3 2 1 5 5 C 1.38154 * 119.99799 * 179.74564 * 4 3 2 6 6 C 1.50696 * 120.00479 * 180.25138 * 5 4 3 7 7 O 1.42904 * 109.47457 * 105.25330 * 6 5 4 8 8 Si 1.86302 * 109.47094 * 345.25611 * 6 5 4 9 9 C 1.38680 * 120.00044 * 0.50390 * 5 4 3 10 10 O 1.35983 * 120.00175 * 179.74563 * 9 5 4 11 11 C 1.42903 * 116.99692 * 179.72948 * 10 9 5 12 12 C 1.50701 * 109.46878 * 179.97438 * 11 10 9 13 13 O 1.21280 * 119.99781 * 0.02562 * 12 11 10 14 14 N 1.34780 * 119.99795 * 179.97438 * 12 11 10 15 15 C 1.46497 * 119.99566 * 180.02562 * 14 12 11 16 16 H 1.08997 * 112.85356 * 334.66885 * 15 14 12 17 17 C 1.53780 * 113.61441 * 105.86757 * 15 14 12 18 18 C 1.54054 * 86.98593 * 89.15950 * 17 15 14 19 19 H 1.08999 * 113.69293 * 139.99361 * 18 17 15 20 20 O 1.42901 * 113.61079 * 270.88623 * 18 17 15 21 21 C 1.53778 * 87.07712 * 25.43107 * 18 17 15 22 22 C 1.38723 * 119.99603 * 359.47327 * 9 5 4 23 23 C 1.38106 * 120.00070 * 0.27316 * 22 9 5 24 24 H 1.09007 * 109.46955 * 180.02562 * 1 2 3 25 25 H 1.08997 * 109.47451 * 300.00347 * 1 2 3 26 26 H 1.09003 * 109.47021 * 60.00700 * 1 2 3 27 27 H 1.08003 * 120.00309 * 359.97438 * 4 3 2 28 28 H 1.09003 * 109.47759 * 225.25640 * 6 5 4 29 29 H 0.96698 * 113.99652 * 299.99885 * 7 6 5 30 30 H 1.48493 * 110.00504 * 180.02562 * 8 6 5 31 31 H 1.48501 * 109.99885 * 301.32124 * 8 6 5 32 32 H 1.09002 * 109.47382 * 59.99808 * 11 10 9 33 33 H 1.09001 * 109.46938 * 299.99794 * 11 10 9 34 34 H 0.96995 * 120.00011 * 0.02562 * 14 12 11 35 35 H 1.08996 * 113.61713 * 203.66148 * 17 15 14 36 36 H 1.09000 * 113.61574 * 334.56513 * 17 15 14 37 37 H 0.96700 * 114.00287 * 277.48956 * 20 18 17 38 38 H 1.08998 * 113.62004 * 220.01977 * 21 18 17 39 39 H 1.09005 * 113.69053 * 89.12719 * 21 18 17 40 40 H 1.08003 * 119.99934 * 180.29541 * 22 9 5 41 41 H 1.08003 * 120.00024 * 179.97438 * 23 22 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4311 1.2843 -0.0005 5 6 4.0583 2.5153 -0.0058 6 6 5.5631 2.5943 -0.0122 7 8 6.0150 2.9703 -1.3147 8 14 6.2742 0.9316 0.4357 9 6 3.3030 3.6783 -0.0001 10 8 3.9203 4.8900 -0.0001 11 6 3.0802 6.0460 0.0000 12 6 3.9344 7.2876 0.0006 13 8 5.1434 7.1918 0.0005 14 7 3.3547 8.5043 0.0003 15 6 4.1850 9.7112 0.0004 16 1 5.1728 9.5455 0.4304 17 6 4.2172 10.4369 -1.3551 18 6 2.9826 11.2218 -0.8722 19 1 2.9990 12.2764 -1.1473 20 8 1.7417 10.5858 -1.1850 21 6 3.4692 10.9514 0.5613 22 6 1.9176 3.6056 0.0000 23 6 1.2907 2.3751 0.0000 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5137 -0.8901 27 1 4.0194 0.3785 -0.0005 28 1 5.8911 3.3374 0.7148 29 1 5.7588 2.3528 -2.0133 30 1 7.7577 0.9962 0.4336 31 1 5.7863 0.5146 1.7749 32 1 2.4510 6.0379 0.8900 33 1 2.4509 6.0379 -0.8900 34 1 2.3877 8.5808 0.0001 35 1 5.1014 11.0582 -1.4969 36 1 4.0165 9.7842 -2.2047 37 1 1.4304 10.7522 -2.0853 38 1 2.6652 10.7138 1.2578 39 1 4.1495 11.7124 0.9437 40 1 1.3294 4.5114 -0.0004 41 1 0.2122 2.3185 0.0005 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_4974302.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:02:56 Heat of formation + Delta-G solvation = -125.521566 kcal Electronic energy + Delta-G solvation = -25724.064453 eV Core-core repulsion = 21765.920042 eV Total energy + Delta-G solvation = -3958.144411 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.85043 -41.30572 -40.18566 -39.41478 -38.17986 -36.91694 -36.06001 -34.06515 -32.81351 -31.04474 -29.45565 -27.95551 -26.79761 -26.63327 -25.41218 -23.63305 -22.44246 -21.86187 -20.65907 -19.63785 -18.80544 -18.74516 -18.07915 -17.67747 -17.50127 -17.24856 -16.94667 -16.62640 -16.26307 -16.14179 -15.86379 -15.60072 -15.42504 -15.20807 -14.98424 -14.59889 -14.30699 -14.11932 -13.75758 -13.58242 -13.48765 -13.43988 -13.01799 -12.70859 -12.52760 -12.34985 -12.33935 -12.09584 -11.83498 -11.49758 -11.43510 -11.07777 -10.70849 -10.41792 -10.17459 -10.12560 -8.81015 -5.04842 0.05547 0.34551 1.25815 1.36202 1.44689 1.61595 1.92689 2.34605 2.54180 2.56924 3.09940 3.44384 3.45451 3.49999 3.68854 3.74923 3.75363 3.81692 3.90029 4.02279 4.09203 4.11829 4.12695 4.25187 4.39271 4.45078 4.45801 4.65501 4.68900 4.69745 4.79105 4.79969 4.84198 4.94855 4.97107 5.00260 5.14421 5.21053 5.41582 5.48654 6.16224 6.39550 6.46492 6.79284 6.83955 7.07752 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.331 6.331 3 C 0.089 3.911 4 C -0.115 4.115 5 C -0.124 4.124 6 C -0.069 4.069 7 O -0.552 6.552 8 Si 0.786 3.214 9 C 0.095 3.905 10 O -0.311 6.311 11 C 0.039 3.961 12 C 0.511 3.489 13 O -0.572 6.572 14 N -0.688 5.688 15 C 0.109 3.891 16 H 0.079 0.921 17 C -0.183 4.183 18 C 0.087 3.913 19 H 0.090 0.910 20 O -0.566 6.566 21 C -0.133 4.133 22 C -0.166 4.166 23 C -0.159 4.159 24 H 0.115 0.885 25 H 0.064 0.936 26 H 0.067 0.933 27 H 0.158 0.842 28 H 0.087 0.913 29 H 0.391 0.609 30 H -0.296 1.296 31 H -0.284 1.284 32 H 0.121 0.879 33 H 0.121 0.879 34 H 0.420 0.580 35 H 0.107 0.893 36 H 0.066 0.934 37 H 0.400 0.600 38 H 0.083 0.917 39 H 0.125 0.875 40 H 0.161 0.839 41 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.588 1.706 -2.444 10.041 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.245 6.245 3 C 0.044 3.956 4 C -0.133 4.133 5 C -0.125 4.125 6 C -0.178 4.178 7 O -0.360 6.360 8 Si 0.690 3.310 9 C 0.050 3.950 10 O -0.225 6.225 11 C -0.039 4.039 12 C 0.298 3.702 13 O -0.451 6.451 14 N -0.342 5.342 15 C 0.003 3.997 16 H 0.097 0.903 17 C -0.222 4.222 18 C 0.027 3.973 19 H 0.108 0.892 20 O -0.375 6.375 21 C -0.171 4.171 22 C -0.184 4.184 23 C -0.177 4.177 24 H 0.133 0.867 25 H 0.083 0.917 26 H 0.086 0.914 27 H 0.175 0.825 28 H 0.105 0.895 29 H 0.241 0.759 30 H -0.224 1.224 31 H -0.210 1.210 32 H 0.138 0.862 33 H 0.139 0.861 34 H 0.258 0.742 35 H 0.125 0.875 36 H 0.085 0.915 37 H 0.251 0.749 38 H 0.101 0.899 39 H 0.144 0.856 40 H 0.179 0.821 41 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -7.681 1.344 -0.951 7.856 hybrid contribution -0.721 1.128 -0.301 1.372 sum -8.402 2.471 -1.252 8.847 Atomic orbital electron populations 1.23348 0.76468 1.05593 1.02312 1.86085 1.23297 1.26161 1.88973 1.18951 0.92032 0.85208 0.99396 1.20175 0.92313 0.96556 1.04211 1.19514 0.96280 0.90722 1.05990 1.25131 0.91998 1.11841 0.88818 1.86552 1.78387 1.54427 1.16601 0.93971 0.76411 0.77482 0.83102 1.18915 0.91645 0.84550 0.99901 1.86206 1.35174 1.11949 1.89127 1.22645 0.92563 0.82270 1.06399 1.20594 0.88354 0.85541 0.75743 1.90762 1.16738 1.87364 1.50214 1.45398 1.11224 1.03557 1.73995 1.21922 0.95060 0.84429 0.98288 0.90301 1.24197 1.00848 1.00021 0.97161 1.22789 0.82913 0.95889 0.95687 0.89232 1.86301 1.37501 1.75659 1.37992 1.23467 1.00498 0.96636 0.96500 1.21360 0.92094 1.00057 1.04930 1.21400 1.01563 0.90880 1.03871 0.86692 0.91740 0.91393 0.82519 0.89517 0.75924 1.22362 1.21026 0.86179 0.86110 0.74160 0.87469 0.91540 0.74919 0.89878 0.85646 0.82140 0.82210 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.49 10.50 -93.45 -0.98 -1.47 16 3 C 0.09 0.20 6.69 22.49 0.15 0.35 16 4 C -0.11 -0.36 8.59 22.35 0.19 -0.17 16 5 C -0.12 -0.78 5.27 -19.78 -0.10 -0.89 16 6 C -0.07 -0.56 2.37 71.23 0.17 -0.39 16 7 O -0.55 -5.06 12.88 -148.98 -1.92 -6.97 16 8 Si 0.79 2.69 29.91 68.60 2.05 4.74 16 9 C 0.10 0.61 6.66 22.49 0.15 0.76 16 10 O -0.31 -3.14 9.00 -74.32 -0.67 -3.81 16 11 C 0.04 0.05 5.22 71.24 0.37 0.43 16 12 C 0.51 3.91 7.91 87.66 0.69 4.61 16 13 O -0.57 -11.04 16.12 16.01 0.26 -10.78 16 14 N -0.69 -0.82 5.14 -440.04 -2.26 -3.08 16 15 C 0.11 0.17 4.29 45.52 0.20 0.37 16 16 H 0.08 0.52 7.50 -2.39 -0.02 0.50 16 17 C -0.18 0.29 7.73 31.21 0.24 0.53 16 18 C 0.09 -0.45 5.28 31.21 0.16 -0.28 16 19 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 20 O -0.57 3.09 12.34 -148.98 -1.84 1.25 16 21 C -0.13 0.53 7.65 31.12 0.24 0.77 16 22 C -0.17 0.00 9.03 22.35 0.20 0.20 16 23 C -0.16 0.15 9.03 22.35 0.20 0.36 16 24 H 0.11 -1.00 8.14 -2.38 -0.02 -1.02 16 25 H 0.06 -0.50 7.66 -2.39 -0.02 -0.51 16 26 H 0.07 -0.56 7.66 -2.39 -0.02 -0.58 16 27 H 0.16 -0.14 5.12 -2.91 -0.01 -0.15 16 28 H 0.09 1.15 7.82 -2.39 -0.02 1.14 16 29 H 0.39 -0.26 8.70 -74.06 -0.64 -0.90 16 30 H -0.30 -3.06 7.11 99.48 0.71 -2.35 16 31 H -0.28 -2.21 7.11 99.48 0.71 -1.50 16 32 H 0.12 -0.60 7.66 -2.39 -0.02 -0.62 16 33 H 0.12 -0.58 7.66 -2.39 -0.02 -0.60 16 34 H 0.42 -1.60 7.63 -92.71 -0.71 -2.31 16 35 H 0.11 -0.34 8.14 -2.39 -0.02 -0.36 16 36 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 37 H 0.40 -4.88 9.12 -74.06 -0.68 -5.56 16 38 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 39 H 0.13 -0.88 8.14 -2.38 -0.02 -0.90 16 40 H 0.16 -1.05 6.29 -2.91 -0.02 -1.07 16 41 H 0.16 -1.07 6.29 -2.91 -0.02 -1.09 16 Total: 0.00 -29.08 343.61 -2.27 -31.35 By element: Atomic # 1 Polarization: -17.98 SS G_CDS: -0.89 Total: -18.87 kcal Atomic # 6 Polarization: 3.67 SS G_CDS: 3.98 Total: 7.65 kcal Atomic # 7 Polarization: -0.82 SS G_CDS: -2.26 Total: -3.08 kcal Atomic # 8 Polarization: -16.63 SS G_CDS: -5.15 Total: -21.78 kcal Atomic # 14 Polarization: 2.69 SS G_CDS: 2.05 Total: 4.74 kcal Total: -29.08 -2.27 -31.35 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_4974302.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.173 kcal (2) G-P(sol) polarization free energy of solvation -29.077 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.250 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.271 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.348 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.522 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds