Wall clock time and date at job start Sun Mar 7 2021 22:03:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35903 * 117.00029 * 2 1 4 4 C 1.38613 * 120.02979 * 180.27827 * 3 2 1 5 5 C 1.38648 * 119.88961 * 180.20707 * 4 3 2 6 6 O 1.35904 * 120.02749 * 179.79167 * 5 4 3 7 7 C 1.42903 * 116.99628 * 359.72745 * 6 5 4 8 8 C 1.50701 * 109.46878 * 179.97438 * 7 6 5 9 9 O 1.21280 * 119.99781 * 0.02562 * 8 7 6 10 10 N 1.34780 * 119.99795 * 179.97438 * 8 7 6 11 11 C 1.46497 * 119.99566 * 180.02562 * 10 8 7 12 12 H 1.09003 * 112.85441 * 23.80863 * 11 10 8 13 13 C 1.53785 * 113.61126 * 155.00450 * 11 10 8 14 14 C 1.53782 * 87.08111 * 139.98069 * 13 11 10 15 15 H 1.09007 * 113.61317 * 89.11362 * 14 13 11 16 16 O 1.42900 * 113.61253 * 220.01838 * 14 13 11 17 17 C 1.53783 * 87.08304 * 334.56769 * 14 13 11 18 18 C 1.38750 * 119.94746 * 359.52126 * 5 4 3 19 19 C 1.50702 * 119.97428 * 180.27419 * 18 5 4 20 20 O 1.42897 * 109.47094 * 284.99532 * 19 18 5 21 21 Si 1.86300 * 109.46911 * 164.99560 * 19 18 5 22 22 C 1.38196 * 120.05357 * 0.24706 * 18 5 4 23 23 C 1.38154 * 120.10856 * 359.97438 * 22 18 5 24 24 H 1.09004 * 109.47639 * 59.99684 * 1 2 3 25 25 H 1.09005 * 109.47251 * 180.02562 * 1 2 3 26 26 H 1.09003 * 109.46895 * 299.99700 * 1 2 3 27 27 H 1.08005 * 120.05423 * 359.97438 * 4 3 2 28 28 H 1.09002 * 109.47382 * 59.99787 * 7 6 5 29 29 H 1.09001 * 109.46938 * 299.99774 * 7 6 5 30 30 H 0.96995 * 120.00011 * 0.02562 * 10 8 7 31 31 H 1.09004 * 113.61147 * 254.52872 * 13 11 10 32 32 H 1.08993 * 113.61377 * 25.34639 * 13 11 10 33 33 H 0.96705 * 113.99552 * 180.02562 * 16 14 13 34 34 H 1.08994 * 113.61317 * 270.88884 * 17 14 13 35 35 H 1.08991 * 113.61491 * 139.98071 * 17 14 13 36 36 H 1.09005 * 109.47091 * 44.99610 * 19 18 5 37 37 H 0.96699 * 114.00397 * 300.00035 * 20 19 18 38 38 H 1.48501 * 110.00056 * 58.68470 * 21 19 18 39 39 H 1.48512 * 109.99886 * 179.97438 * 21 19 18 40 40 H 1.07999 * 119.94983 * 180.02562 * 22 18 5 41 41 H 1.08005 * 119.97010 * 180.02562 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2842 -0.0058 5 6 4.0566 2.5210 -0.0015 6 8 5.4135 2.5961 -0.0029 7 6 6.1316 1.3606 -0.0029 8 6 7.6124 1.6402 -0.0052 9 8 8.0133 2.7849 -0.0062 10 7 8.4912 0.6183 -0.0051 11 6 9.9307 0.8902 -0.0067 12 1 10.1765 1.8722 0.3976 13 6 10.7736 -0.2498 0.5889 14 6 11.7868 0.0167 -0.5368 15 1 12.5410 0.7601 -0.2784 16 8 12.3470 -1.1730 -1.0962 17 6 10.6134 0.5869 -1.3510 18 6 3.2970 3.6822 -0.0013 19 6 3.9773 5.0269 -0.0028 20 8 4.5048 5.2953 1.2978 21 14 2.7432 6.3466 -0.4570 22 6 1.9171 3.6065 -0.0004 23 6 1.2905 2.3752 -0.0001 24 1 -0.3634 0.5139 -0.8900 25 1 -0.3634 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 4.0197 0.3792 -0.0100 28 1 5.8690 0.7877 -0.8923 29 1 5.8708 0.7888 0.8877 30 1 8.1705 -0.2971 -0.0039 31 1 11.1601 -0.0327 1.5847 32 1 10.2944 -1.2267 0.5246 33 1 12.9853 -1.0117 -1.8045 34 1 10.0910 -0.1614 -1.9469 35 1 10.8706 1.4794 -1.9212 36 1 4.7890 5.0226 -0.7304 37 1 3.8370 5.3142 1.9969 38 1 1.6155 6.3415 0.5091 39 1 3.4016 7.6778 -0.4615 40 1 1.3275 4.5114 -0.0007 41 1 0.2120 2.3187 0.0002 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_4974312.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:03:00 Heat of formation + Delta-G solvation = -122.073656 kcal Electronic energy + Delta-G solvation = -25470.005849 eV Core-core repulsion = 21512.010950 eV Total energy + Delta-G solvation = -3957.994899 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -41.82665 -41.18654 -40.18522 -39.40481 -38.20819 -36.91436 -36.38146 -34.08469 -32.28215 -31.41063 -29.51329 -28.50784 -26.88771 -26.06809 -25.26231 -23.52263 -22.46400 -21.69013 -20.99265 -19.97549 -18.87550 -18.48853 -17.99047 -17.78281 -17.50281 -17.23561 -16.77693 -16.75834 -16.45514 -16.30133 -15.92748 -15.54457 -15.44672 -15.14994 -14.80490 -14.54132 -14.46146 -13.78028 -13.65682 -13.60463 -13.53086 -13.40001 -13.13018 -12.80325 -12.56176 -12.35932 -12.27794 -11.97371 -11.81629 -11.68933 -11.53172 -11.00836 -10.79114 -10.37179 -10.14944 -9.69434 -9.07749 -4.88542 0.21501 0.33633 1.39650 1.41942 1.49012 1.63189 2.05146 2.15031 2.53251 2.59053 3.16611 3.31599 3.47635 3.57841 3.58939 3.68279 3.70374 3.78999 3.83384 3.87642 3.92760 4.01171 4.03635 4.14055 4.25698 4.36518 4.39835 4.41987 4.52242 4.59956 4.62945 4.77168 4.81682 4.85654 5.01518 5.04370 5.23359 5.28519 5.38589 5.46305 6.11326 6.29695 6.38092 6.59427 6.63385 7.10102 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.247 4.247 5 C 0.193 3.807 6 O -0.272 6.272 7 C 0.037 3.963 8 C 0.517 3.483 9 O -0.508 6.508 10 N -0.716 5.716 11 C 0.126 3.874 12 H 0.121 0.879 13 C -0.137 4.137 14 C 0.079 3.921 15 H 0.088 0.912 16 O -0.558 6.558 17 C -0.183 4.183 18 C -0.182 4.182 19 C -0.059 4.059 20 O -0.521 6.521 21 Si 0.686 3.314 22 C -0.043 4.043 23 C -0.239 4.239 24 H 0.060 0.940 25 H 0.103 0.897 26 H 0.058 0.942 27 H 0.138 0.862 28 H 0.097 0.903 29 H 0.096 0.904 30 H 0.404 0.596 31 H 0.084 0.916 32 H 0.097 0.903 33 H 0.382 0.618 34 H 0.094 0.906 35 H 0.077 0.923 36 H 0.118 0.882 37 H 0.369 0.631 38 H -0.261 1.261 39 H -0.257 1.257 40 H 0.138 0.862 41 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.878 -4.306 -2.063 5.575 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.267 4.267 5 C 0.146 3.854 6 O -0.183 6.183 7 C -0.042 4.042 8 C 0.302 3.698 9 O -0.381 6.381 10 N -0.370 5.370 11 C 0.021 3.979 12 H 0.139 0.861 13 C -0.175 4.175 14 C 0.020 3.980 15 H 0.106 0.894 16 O -0.364 6.364 17 C -0.222 4.222 18 C -0.183 4.183 19 C -0.169 4.169 20 O -0.326 6.326 21 Si 0.588 3.412 22 C -0.060 4.060 23 C -0.258 4.258 24 H 0.078 0.922 25 H 0.121 0.879 26 H 0.077 0.923 27 H 0.156 0.844 28 H 0.114 0.886 29 H 0.114 0.886 30 H 0.239 0.761 31 H 0.103 0.897 32 H 0.115 0.885 33 H 0.230 0.770 34 H 0.113 0.887 35 H 0.096 0.904 36 H 0.135 0.865 37 H 0.216 0.784 38 H -0.186 1.186 39 H -0.182 1.182 40 H 0.156 0.844 41 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -2.621 -2.989 -1.703 4.325 hybrid contribution -0.065 -0.713 0.768 1.050 sum -2.685 -3.702 -0.935 4.668 Atomic orbital electron populations 1.23147 0.77602 1.04418 1.01775 1.86076 1.22020 1.26675 1.87993 1.18694 0.91460 0.84394 0.92629 1.20395 0.92938 0.97344 1.15989 1.18398 0.81974 0.92426 0.92608 1.86265 1.14734 1.29589 1.87724 1.22525 0.90269 0.87138 1.04285 1.20047 0.87378 0.85692 0.76684 1.90799 1.79728 1.20818 1.46754 1.45729 1.05945 1.09174 1.76132 1.22253 0.78333 1.00207 0.97065 0.86099 1.23471 0.95939 0.99406 0.98659 1.23072 0.93062 0.87437 0.94452 0.89380 1.86514 1.62703 1.31109 1.56041 1.24215 0.98011 1.02189 0.97791 1.19509 0.92732 0.94375 1.11669 1.24824 1.05946 0.97770 0.88395 1.86699 1.36942 1.92756 1.16252 0.95202 0.77614 0.78148 0.90219 1.20780 0.92688 0.97886 0.94693 1.21119 1.00440 0.91763 1.12456 0.92152 0.87885 0.92311 0.84403 0.88550 0.88599 0.76127 0.89748 0.88495 0.77010 0.88733 0.90448 0.86463 0.78398 1.18623 1.18196 0.84439 0.84770 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.30 10.49 -19.44 -0.20 -0.51 16 3 C 0.17 0.23 6.68 -39.24 -0.26 -0.04 16 4 C -0.25 -0.32 8.97 -39.29 -0.35 -0.67 16 5 C 0.19 0.48 6.66 -39.24 -0.26 0.22 16 6 O -0.27 -0.97 8.99 -39.35 -0.35 -1.32 16 7 C 0.04 0.00 5.22 36.01 0.19 0.18 16 8 C 0.52 1.04 7.91 -10.98 -0.09 0.95 16 9 O -0.51 -3.53 16.10 -14.35 -0.23 -3.76 16 10 N -0.72 0.74 5.35 -53.01 -0.28 0.45 16 11 C 0.13 -0.07 4.24 -67.11 -0.28 -0.35 16 12 H 0.12 0.12 7.46 -51.93 -0.39 -0.27 16 13 C -0.14 0.20 7.66 -25.92 -0.20 0.00 16 14 C 0.08 -0.10 5.21 -25.92 -0.14 -0.23 16 15 H 0.09 -0.21 8.14 -51.92 -0.42 -0.63 16 16 O -0.56 0.09 13.67 -35.23 -0.48 -0.39 16 17 C -0.18 0.18 7.71 -25.91 -0.20 -0.02 16 18 C -0.18 -0.35 5.27 -104.45 -0.55 -0.90 16 19 C -0.06 -0.14 2.37 36.01 0.09 -0.05 16 20 O -0.52 -2.12 12.88 -35.23 -0.45 -2.57 16 21 Si 0.69 0.18 30.24 -169.99 -5.14 -4.96 16 22 C -0.04 -0.01 8.65 -39.63 -0.34 -0.36 16 23 C -0.24 -0.05 9.04 -39.41 -0.36 -0.40 16 24 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 25 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 26 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 27 H 0.14 -0.09 6.30 -52.48 -0.33 -0.42 16 28 H 0.10 -0.26 7.65 -51.93 -0.40 -0.65 16 29 H 0.10 -0.22 7.67 -51.93 -0.40 -0.62 16 30 H 0.40 -1.61 8.73 -40.82 -0.36 -1.96 16 31 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 32 H 0.10 -0.16 8.12 -51.93 -0.42 -0.58 16 33 H 0.38 -1.52 9.12 45.56 0.42 -1.11 16 34 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 36 H 0.12 0.37 7.82 -51.93 -0.41 -0.03 16 37 H 0.37 0.22 8.70 45.56 0.40 0.61 16 38 H -0.26 -0.31 6.68 56.52 0.38 0.06 16 39 H -0.26 -0.95 7.11 56.52 0.40 -0.55 16 40 H 0.14 -0.18 4.85 -52.49 -0.25 -0.44 16 41 H 0.13 -0.26 6.29 -52.48 -0.33 -0.59 16 LS Contribution 345.68 15.07 5.21 5.21 Total: 0.00 -11.00 345.68 -8.31 -19.31 By element: Atomic # 1 Polarization: -6.11 SS G_CDS: -4.60 Total: -10.71 kcal Atomic # 6 Polarization: 1.03 SS G_CDS: -1.77 Total: -0.74 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -0.28 Total: 0.45 kcal Atomic # 8 Polarization: -6.84 SS G_CDS: -1.72 Total: -8.56 kcal Atomic # 14 Polarization: 0.18 SS G_CDS: -5.14 Total: -4.96 kcal Total LS contribution 5.21 Total: 5.21 kcal Total: -11.00 -8.31 -19.31 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_4974312.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.764 kcal (2) G-P(sol) polarization free energy of solvation -11.003 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.767 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.307 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.309 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.074 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds