Wall clock time and date at job start Sun Mar 7 2021 22:03:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35903 * 117.00029 * 2 1 4 4 C 1.38613 * 120.02979 * 180.27827 * 3 2 1 5 5 C 1.38648 * 119.88961 * 180.20707 * 4 3 2 6 6 O 1.35904 * 120.02749 * 179.79167 * 5 4 3 7 7 C 1.42903 * 116.99628 * 359.72745 * 6 5 4 8 8 C 1.50701 * 109.46878 * 179.97438 * 7 6 5 9 9 O 1.21280 * 119.99781 * 0.02562 * 8 7 6 10 10 N 1.34780 * 119.99795 * 179.97438 * 8 7 6 11 11 C 1.46497 * 119.99566 * 180.02562 * 10 8 7 12 12 H 1.09003 * 112.85441 * 23.80863 * 11 10 8 13 13 C 1.53785 * 113.61126 * 155.00450 * 11 10 8 14 14 C 1.53782 * 87.08111 * 139.98069 * 13 11 10 15 15 H 1.09007 * 113.61317 * 89.11362 * 14 13 11 16 16 O 1.42900 * 113.61253 * 220.01838 * 14 13 11 17 17 C 1.53783 * 87.08304 * 334.56769 * 14 13 11 18 18 C 1.38750 * 119.94746 * 359.52126 * 5 4 3 19 19 C 1.50702 * 119.97428 * 180.27419 * 18 5 4 20 20 O 1.42897 * 109.47094 * 284.99532 * 19 18 5 21 21 Si 1.86300 * 109.46911 * 164.99560 * 19 18 5 22 22 C 1.38196 * 120.05357 * 0.24706 * 18 5 4 23 23 C 1.38154 * 120.10856 * 359.97438 * 22 18 5 24 24 H 1.09004 * 109.47639 * 59.99684 * 1 2 3 25 25 H 1.09005 * 109.47251 * 180.02562 * 1 2 3 26 26 H 1.09003 * 109.46895 * 299.99700 * 1 2 3 27 27 H 1.08005 * 120.05423 * 359.97438 * 4 3 2 28 28 H 1.09002 * 109.47382 * 59.99787 * 7 6 5 29 29 H 1.09001 * 109.46938 * 299.99774 * 7 6 5 30 30 H 0.96995 * 120.00011 * 0.02562 * 10 8 7 31 31 H 1.09004 * 113.61147 * 254.52872 * 13 11 10 32 32 H 1.08993 * 113.61377 * 25.34639 * 13 11 10 33 33 H 0.96705 * 113.99552 * 180.02562 * 16 14 13 34 34 H 1.08994 * 113.61317 * 270.88884 * 17 14 13 35 35 H 1.08991 * 113.61491 * 139.98071 * 17 14 13 36 36 H 1.09005 * 109.47091 * 44.99610 * 19 18 5 37 37 H 0.96699 * 114.00397 * 300.00035 * 20 19 18 38 38 H 1.48501 * 110.00056 * 58.68470 * 21 19 18 39 39 H 1.48512 * 109.99886 * 179.97438 * 21 19 18 40 40 H 1.07999 * 119.94983 * 180.02562 * 22 18 5 41 41 H 1.08005 * 119.97010 * 180.02562 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2842 -0.0058 5 6 4.0566 2.5210 -0.0015 6 8 5.4135 2.5961 -0.0029 7 6 6.1316 1.3606 -0.0029 8 6 7.6124 1.6402 -0.0052 9 8 8.0133 2.7849 -0.0062 10 7 8.4912 0.6183 -0.0051 11 6 9.9307 0.8902 -0.0067 12 1 10.1765 1.8722 0.3976 13 6 10.7736 -0.2498 0.5889 14 6 11.7868 0.0167 -0.5368 15 1 12.5410 0.7601 -0.2784 16 8 12.3470 -1.1730 -1.0962 17 6 10.6134 0.5869 -1.3510 18 6 3.2970 3.6822 -0.0013 19 6 3.9773 5.0269 -0.0028 20 8 4.5048 5.2953 1.2978 21 14 2.7432 6.3466 -0.4570 22 6 1.9171 3.6065 -0.0004 23 6 1.2905 2.3752 -0.0001 24 1 -0.3634 0.5139 -0.8900 25 1 -0.3634 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 4.0197 0.3792 -0.0100 28 1 5.8690 0.7877 -0.8923 29 1 5.8708 0.7888 0.8877 30 1 8.1705 -0.2971 -0.0039 31 1 11.1601 -0.0327 1.5847 32 1 10.2944 -1.2267 0.5246 33 1 12.9853 -1.0117 -1.8045 34 1 10.0910 -0.1614 -1.9469 35 1 10.8706 1.4794 -1.9212 36 1 4.7890 5.0226 -0.7304 37 1 3.8370 5.3142 1.9969 38 1 1.6155 6.3415 0.5091 39 1 3.4016 7.6778 -0.4615 40 1 1.3275 4.5114 -0.0007 41 1 0.2120 2.3187 0.0002 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_4974312.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:03:00 Heat of formation + Delta-G solvation = -128.254078 kcal Electronic energy + Delta-G solvation = -25470.273852 eV Core-core repulsion = 21512.010950 eV Total energy + Delta-G solvation = -3958.262902 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.87723 -41.22566 -40.17802 -39.47420 -38.34838 -37.02375 -36.39245 -34.15648 -32.31532 -31.43056 -29.54537 -28.36221 -26.81491 -26.14091 -25.24598 -23.53455 -22.50923 -21.78243 -20.94247 -19.99137 -18.83625 -18.55553 -18.11805 -17.81579 -17.55469 -17.24295 -16.78969 -16.68296 -16.51720 -16.26798 -16.05598 -15.58323 -15.54152 -15.18510 -14.85974 -14.60086 -14.51165 -13.77660 -13.73316 -13.54367 -13.49246 -13.35018 -13.14876 -12.77088 -12.49953 -12.34047 -12.30499 -12.04667 -11.75099 -11.67019 -11.63191 -11.10530 -10.81445 -10.52008 -10.20565 -9.71663 -9.11724 -4.92981 0.18863 0.29452 1.31472 1.35476 1.40598 1.55673 1.96162 2.23752 2.53231 2.56158 3.28784 3.37196 3.48853 3.50753 3.63745 3.71066 3.77236 3.79304 3.90292 3.94253 4.01522 4.05622 4.15738 4.33527 4.38944 4.42014 4.43521 4.46885 4.65305 4.67921 4.71792 4.78471 4.90196 4.91784 5.01256 5.04528 5.22361 5.26674 5.40423 5.46770 6.11037 6.33732 6.40034 6.56946 6.83866 7.04628 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.330 6.330 3 C 0.164 3.836 4 C -0.252 4.252 5 C 0.176 3.824 6 O -0.303 6.303 7 C 0.035 3.965 8 C 0.515 3.485 9 O -0.568 6.568 10 N -0.699 5.699 11 C 0.120 3.880 12 H 0.102 0.898 13 C -0.130 4.130 14 C 0.080 3.920 15 H 0.098 0.902 16 O -0.575 6.575 17 C -0.178 4.178 18 C -0.195 4.195 19 C -0.078 4.078 20 O -0.550 6.550 21 Si 0.782 3.218 22 C -0.041 4.041 23 C -0.237 4.237 24 H 0.071 0.929 25 H 0.116 0.884 26 H 0.067 0.933 27 H 0.153 0.847 28 H 0.124 0.876 29 H 0.120 0.880 30 H 0.420 0.580 31 H 0.088 0.912 32 H 0.102 0.898 33 H 0.397 0.603 34 H 0.095 0.905 35 H 0.070 0.930 36 H 0.097 0.903 37 H 0.381 0.619 38 H -0.262 1.262 39 H -0.308 1.308 40 H 0.156 0.844 41 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.410 -5.701 -2.185 7.531 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.118 3.882 4 C -0.271 4.271 5 C 0.130 3.870 6 O -0.215 6.215 7 C -0.043 4.043 8 C 0.301 3.699 9 O -0.446 6.446 10 N -0.353 5.353 11 C 0.015 3.985 12 H 0.120 0.880 13 C -0.168 4.168 14 C 0.021 3.979 15 H 0.116 0.884 16 O -0.384 6.384 17 C -0.217 4.217 18 C -0.197 4.197 19 C -0.186 4.186 20 O -0.357 6.357 21 Si 0.686 3.314 22 C -0.058 4.058 23 C -0.256 4.256 24 H 0.089 0.911 25 H 0.134 0.866 26 H 0.085 0.915 27 H 0.170 0.830 28 H 0.142 0.858 29 H 0.138 0.862 30 H 0.259 0.741 31 H 0.107 0.893 32 H 0.121 0.879 33 H 0.247 0.753 34 H 0.114 0.886 35 H 0.089 0.911 36 H 0.115 0.885 37 H 0.230 0.770 38 H -0.188 1.188 39 H -0.237 1.237 40 H 0.173 0.827 41 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -4.152 -4.477 -1.827 6.373 hybrid contribution 0.463 -0.344 0.800 0.986 sum -3.689 -4.821 -1.027 6.157 Atomic orbital electron populations 1.23404 0.75989 1.05698 1.02706 1.86056 1.23770 1.26576 1.87925 1.18874 0.91643 0.84998 0.92683 1.20554 0.93440 0.97409 1.15724 1.18588 0.81682 0.93197 0.93525 1.86223 1.15566 1.31589 1.88143 1.22734 0.88376 0.86527 1.06653 1.20510 0.88578 0.85211 0.75569 1.90770 1.80739 1.23169 1.49876 1.45629 1.05577 1.09535 1.74513 1.22224 0.78651 0.99898 0.97758 0.88014 1.23439 0.95521 0.98992 0.98851 1.23117 0.93197 0.87400 0.94203 0.88383 1.86468 1.63338 1.31700 1.56846 1.24165 0.98216 1.01922 0.97401 1.19613 0.93528 0.93951 1.12572 1.25174 1.06294 0.99761 0.87354 1.86649 1.38578 1.93053 1.17462 0.94105 0.75456 0.73313 0.88570 1.20950 0.91986 0.98830 0.94079 1.21402 1.01630 0.91211 1.11308 0.91070 0.86577 0.91471 0.82958 0.85816 0.86241 0.74148 0.89301 0.87917 0.75292 0.88610 0.91087 0.88497 0.77007 1.18775 1.23651 0.82653 0.82466 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.29 10.49 -92.46 -0.97 -1.26 16 3 C 0.16 0.30 6.68 22.49 0.15 0.45 16 4 C -0.25 -0.62 8.97 22.46 0.20 -0.42 16 5 C 0.18 1.04 6.66 22.49 0.15 1.19 16 6 O -0.30 -2.69 8.99 -73.43 -0.66 -3.35 16 7 C 0.03 0.01 5.22 71.24 0.37 0.39 16 8 C 0.52 2.84 7.91 87.66 0.69 3.53 16 9 O -0.57 -9.60 16.10 16.01 0.26 -9.34 16 10 N -0.70 1.03 5.35 -440.02 -2.36 -1.33 16 11 C 0.12 0.00 4.24 45.52 0.19 0.19 16 12 H 0.10 0.43 7.46 -2.39 -0.02 0.42 16 13 C -0.13 0.38 7.66 31.12 0.24 0.62 16 14 C 0.08 -0.20 5.21 31.12 0.16 -0.03 16 15 H 0.10 -0.45 8.14 -2.38 -0.02 -0.47 16 16 O -0.58 0.40 13.67 -148.98 -2.04 -1.64 16 17 C -0.18 0.23 7.71 31.12 0.24 0.47 16 18 C -0.20 -0.89 5.27 -19.75 -0.10 -1.00 16 19 C -0.08 -0.49 2.37 71.24 0.17 -0.33 16 20 O -0.55 -5.64 12.88 -148.98 -1.92 -7.56 16 21 Si 0.78 0.60 30.24 68.60 2.07 2.68 16 22 C -0.04 0.00 8.65 22.24 0.19 0.19 16 23 C -0.24 0.22 9.04 22.38 0.20 0.42 16 24 H 0.07 -0.60 7.66 -2.38 -0.02 -0.62 16 25 H 0.12 -1.07 8.14 -2.38 -0.02 -1.09 16 26 H 0.07 -0.54 7.66 -2.39 -0.02 -0.55 16 27 H 0.15 -0.28 6.30 -2.91 -0.02 -0.30 16 28 H 0.12 -0.70 7.65 -2.39 -0.02 -0.72 16 29 H 0.12 -0.58 7.67 -2.39 -0.02 -0.60 16 30 H 0.42 -3.53 8.73 -92.71 -0.81 -4.34 16 31 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 32 H 0.10 -0.41 8.12 -2.39 -0.02 -0.42 16 33 H 0.40 -3.27 9.12 -74.05 -0.68 -3.95 16 34 H 0.10 -0.14 8.14 -2.39 -0.02 -0.16 16 35 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 36 H 0.10 0.92 7.82 -2.38 -0.02 0.90 16 37 H 0.38 1.02 8.70 -74.06 -0.64 0.38 16 38 H -0.26 -0.24 6.68 99.48 0.66 0.42 16 39 H -0.31 -2.83 7.11 99.48 0.71 -2.12 16 40 H 0.16 -0.67 4.85 -2.91 -0.01 -0.68 16 41 H 0.16 -0.97 6.29 -2.91 -0.02 -0.99 16 Total: 0.00 -27.72 345.68 -2.67 -30.39 By element: Atomic # 1 Polarization: -14.25 SS G_CDS: -1.03 Total: -15.28 kcal Atomic # 6 Polarization: 2.72 SS G_CDS: 3.97 Total: 6.69 kcal Atomic # 7 Polarization: 1.03 SS G_CDS: -2.36 Total: -1.33 kcal Atomic # 8 Polarization: -17.82 SS G_CDS: -5.33 Total: -23.15 kcal Atomic # 14 Polarization: 0.60 SS G_CDS: 2.07 Total: 2.68 kcal Total: -27.72 -2.67 -30.39 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_4974312.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.867 kcal (2) G-P(sol) polarization free energy of solvation -27.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.582 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.672 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.387 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.254 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds