Wall clock time and date at job start Sun Mar 7 2021 22:03:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.37635 * 125.67595 * 2 1 4 4 C 1.46671 * 126.22885 * 359.95112 * 3 2 1 5 5 O 1.21698 * 119.99753 * 355.04809 * 4 3 2 6 6 N 1.34768 * 120.00316 * 175.04781 * 4 3 2 7 7 C 1.46504 * 120.00066 * 185.11325 * 6 4 3 8 8 H 1.08996 * 112.85282 * 334.66715 * 7 6 4 9 9 C 1.53782 * 113.61323 * 105.86427 * 7 6 4 10 10 C 1.54058 * 86.98717 * 89.16140 * 9 7 6 11 11 H 1.09000 * 113.61908 * 139.97464 * 10 9 7 12 12 O 1.42897 * 113.69054 * 270.87611 * 10 9 7 13 13 C 1.53785 * 113.61516 * 203.47107 * 7 6 4 14 14 C 1.37884 * 107.54889 * 179.97438 * 3 2 1 15 15 C 1.39879 * 107.09577 * 359.77347 * 14 3 2 16 16 Br 1.89093 * 126.07857 * 180.25185 * 15 14 3 17 17 C 1.35507 * 107.84570 * 0.37691 * 15 14 3 18 18 C 1.50700 * 125.56759 * 179.87711 * 17 15 14 19 19 O 1.42900 * 109.47646 * 305.80167 * 18 17 15 20 20 Si 1.86308 * 109.47087 * 65.80298 * 18 17 15 21 21 H 1.08998 * 109.46546 * 275.71218 * 1 2 3 22 22 H 1.08993 * 109.47166 * 35.70839 * 1 2 3 23 23 H 1.09002 * 109.47428 * 155.71485 * 1 2 3 24 24 H 0.97003 * 120.00299 * 5.11900 * 6 4 3 25 25 H 1.09001 * 113.61610 * 203.66086 * 9 7 6 26 26 H 1.08996 * 113.61730 * 334.57044 * 9 7 6 27 27 H 0.96702 * 113.99508 * 277.52617 * 12 10 9 28 28 H 1.09000 * 113.61485 * 25.43438 * 13 7 6 29 29 H 1.09000 * 113.61117 * 156.25277 * 13 7 6 30 30 H 1.08007 * 126.45652 * 179.97438 * 14 3 2 31 31 H 1.09004 * 109.47192 * 185.79957 * 18 17 15 32 32 H 0.96699 * 113.99837 * 180.02562 * 19 18 17 33 33 H 1.48498 * 109.99508 * 294.63933 * 20 18 17 34 34 H 1.48499 * 109.99705 * 55.95977 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8122 2.5122 -0.0010 5 8 0.6251 2.7644 -0.0929 6 7 2.7080 3.5140 0.0999 7 6 2.2473 4.9002 0.2117 8 1 1.2595 5.0543 -0.2225 9 6 2.3972 5.4870 1.6253 10 6 3.8092 5.9343 1.2018 11 1 4.0819 6.9242 1.5679 12 8 4.8197 4.9542 1.4469 13 6 3.2894 5.9345 -0.2456 14 6 3.5781 0.6891 0.0006 15 6 3.5529 -0.7095 0.0062 16 35 5.0609 -1.8503 0.0162 17 6 2.2558 -1.1015 0.0004 18 6 1.7714 -2.5285 0.0010 19 8 2.3700 -3.2353 -1.0872 20 14 2.2453 -3.3447 1.6073 21 1 -0.3632 0.1023 1.0226 22 1 -0.3633 0.8344 -0.5998 23 1 -0.3634 -0.9367 -0.4227 24 1 3.6579 3.3173 0.0983 25 1 1.7191 6.3159 1.8281 26 1 2.3943 4.7339 2.4132 27 1 5.1506 4.9492 2.3556 28 1 4.0063 5.5425 -0.9670 29 1 2.8546 6.8851 -0.5547 30 1 4.4583 1.3150 0.0004 31 1 0.6869 -2.5441 -0.1084 32 1 2.1024 -4.1625 -1.1487 33 1 3.7233 -3.4459 1.7087 34 1 1.7099 -2.5635 2.7511 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_5000100.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:03:03 Heat of formation + Delta-G solvation = -27.876024 kcal Electronic energy + Delta-G solvation = -20970.988830 eV Core-core repulsion = 17532.962877 eV Total energy + Delta-G solvation = -3438.025953 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.025 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -42.95719 -41.19413 -39.48827 -37.68556 -36.14966 -34.81898 -33.93582 -32.15104 -30.98464 -27.47799 -27.38205 -26.80640 -25.14864 -23.33116 -21.72781 -20.77363 -20.30161 -19.13196 -18.49388 -18.10170 -17.50370 -17.15526 -16.75299 -16.18413 -16.05167 -15.59666 -15.48326 -14.99757 -14.84266 -14.62027 -14.42241 -13.97219 -13.81299 -13.67447 -13.55232 -13.28999 -12.84761 -12.72140 -12.41599 -12.36677 -11.81456 -11.52249 -11.34529 -10.90679 -10.72673 -10.62360 -10.23770 -9.91401 -9.34540 -5.04184 0.01595 0.54836 0.87295 1.15906 1.51364 1.66126 1.99801 2.07577 2.15680 3.08606 3.13326 3.42063 3.43894 3.60753 3.68114 3.75015 3.80328 3.93855 4.11376 4.12143 4.19401 4.29981 4.53658 4.54284 4.67422 4.69422 4.78392 4.81567 4.93330 4.99301 5.17356 5.42282 5.48642 5.70154 6.30561 6.81653 6.86410 6.93405 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.399 5.399 3 C -0.052 4.052 4 C 0.591 3.409 5 O -0.575 6.575 6 N -0.682 5.682 7 C 0.111 3.889 8 H 0.091 0.909 9 C -0.180 4.180 10 C 0.082 3.918 11 H 0.091 0.909 12 O -0.569 6.569 13 C -0.135 4.135 14 C -0.109 4.109 15 C -0.183 4.183 16 Br -0.010 7.010 17 C 0.080 3.920 18 C -0.054 4.054 19 O -0.547 6.547 20 Si 0.765 3.235 21 H 0.088 0.912 22 H 0.095 0.905 23 H 0.117 0.883 24 H 0.416 0.584 25 H 0.114 0.886 26 H 0.064 0.936 27 H 0.399 0.601 28 H 0.078 0.922 29 H 0.131 0.869 30 H 0.172 0.828 31 H 0.101 0.899 32 H 0.409 0.591 33 H -0.251 1.251 34 H -0.307 1.307 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.226 -0.516 1.895 2.315 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.072 5.072 3 C -0.166 4.166 4 C 0.379 3.621 5 O -0.456 6.456 6 N -0.333 5.333 7 C 0.006 3.994 8 H 0.109 0.891 9 C -0.219 4.219 10 C 0.023 3.977 11 H 0.109 0.891 12 O -0.377 6.377 13 C -0.173 4.173 14 C -0.136 4.136 15 C -0.269 4.269 16 Br 0.074 6.926 17 C -0.041 4.041 18 C -0.163 4.163 19 O -0.357 6.357 20 Si 0.666 3.334 21 H 0.107 0.893 22 H 0.114 0.886 23 H 0.136 0.864 24 H 0.254 0.746 25 H 0.132 0.868 26 H 0.083 0.917 27 H 0.250 0.750 28 H 0.097 0.903 29 H 0.149 0.851 30 H 0.189 0.811 31 H 0.119 0.881 32 H 0.261 0.739 33 H -0.175 1.175 34 H -0.235 1.235 Dipole moment (debyes) X Y Z Total from point charges -1.295 -0.188 1.849 2.265 hybrid contribution 0.072 0.931 0.300 0.980 sum -1.223 0.743 2.150 2.582 Atomic orbital electron populations 1.22570 0.73860 1.06593 1.05228 1.43949 1.08009 1.03721 1.51568 1.20096 0.90185 0.87912 1.18410 1.16935 0.85508 0.83660 0.75968 1.90781 1.17297 1.85087 1.52471 1.45284 1.10136 1.05284 1.72633 1.21991 0.99219 0.80034 0.98180 0.89081 1.24202 0.99441 1.01787 0.96499 1.22851 0.86470 0.92010 0.96379 0.89098 1.86329 1.56265 1.58653 1.36480 1.23498 0.97210 1.00055 0.96511 1.21500 0.95682 0.93130 1.03297 1.21008 0.92132 0.94749 1.18990 1.96619 1.35055 1.62921 1.98036 1.20154 0.89220 0.89404 1.05304 1.24330 1.00947 0.87761 1.03232 1.86500 1.71443 1.29320 1.48420 0.95236 0.81429 0.86169 0.70563 0.89324 0.88617 0.86448 0.74608 0.86768 0.91735 0.75043 0.90345 0.85105 0.81062 0.88102 0.73880 1.17531 1.23493 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.09 10.27 127.77 1.31 1.40 16 2 N -0.40 -2.79 3.16 -519.62 -1.64 -4.44 16 3 C -0.05 -0.44 6.88 40.35 0.28 -0.16 16 4 C 0.59 5.40 7.77 86.45 0.67 6.07 16 5 O -0.57 -8.08 14.37 -4.34 -0.06 -8.14 16 6 N -0.68 -2.69 5.12 -444.00 -2.28 -4.97 16 7 C 0.11 0.16 4.33 45.52 0.20 0.36 16 8 H 0.09 0.40 7.45 -2.39 -0.02 0.38 16 9 C -0.18 0.35 7.73 31.22 0.24 0.59 16 10 C 0.08 -0.34 5.28 31.22 0.16 -0.18 16 11 H 0.09 -0.68 8.14 -2.39 -0.02 -0.69 16 12 O -0.57 1.60 12.35 -148.98 -1.84 -0.24 16 13 C -0.14 0.44 7.65 31.12 0.24 0.68 16 14 C -0.11 -0.77 10.34 22.58 0.23 -0.54 16 15 C -0.18 -1.58 6.11 22.04 0.13 -1.44 16 16 Br -0.01 -0.08 30.60 -20.37 -0.62 -0.70 16 17 C 0.08 0.53 5.30 41.35 0.22 0.75 16 18 C -0.05 0.03 2.74 71.24 0.19 0.23 16 19 O -0.55 0.53 12.14 -148.98 -1.81 -1.28 16 20 Si 0.76 -1.00 31.50 68.60 2.16 1.16 16 21 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 22 H 0.10 0.45 6.55 -2.39 -0.02 0.44 16 23 H 0.12 -0.54 6.66 -2.39 -0.02 -0.56 16 24 H 0.42 0.72 6.53 -92.71 -0.61 0.11 16 25 H 0.11 -0.54 8.14 -2.39 -0.02 -0.56 16 26 H 0.06 0.06 8.14 -2.39 -0.02 0.05 16 27 H 0.40 -3.77 9.12 -74.06 -0.68 -4.44 16 28 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 29 H 0.13 -0.95 8.14 -2.39 -0.02 -0.97 16 30 H 0.17 0.43 7.45 -2.91 -0.02 0.41 16 31 H 0.10 -0.62 6.32 -2.38 -0.02 -0.64 16 32 H 0.41 -4.85 8.74 -74.06 -0.65 -5.50 16 33 H -0.25 -1.08 5.92 99.48 0.59 -0.49 16 34 H -0.31 -1.97 7.11 99.48 0.71 -1.26 16 Total: 0.00 -21.68 304.36 -3.04 -24.72 By element: Atomic # 1 Polarization: -13.03 SS G_CDS: -0.83 Total: -13.87 kcal Atomic # 6 Polarization: 3.87 SS G_CDS: 3.89 Total: 7.75 kcal Atomic # 7 Polarization: -5.49 SS G_CDS: -3.92 Total: -9.41 kcal Atomic # 8 Polarization: -5.95 SS G_CDS: -3.71 Total: -9.66 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: 2.16 Total: 1.16 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -0.62 Total: -0.70 kcal Total: -21.68 -3.04 -24.72 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_5000100.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.155 kcal (2) G-P(sol) polarization free energy of solvation -21.680 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.835 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.721 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.876 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds